Gas2 (growth arrest specific 2) - Rat Genome Database

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Gene: Gas2 (growth arrest specific 2) Ictidomys tridecemlineatus
Analyze
Symbol: Gas2
Name: growth arrest specific 2
RGD ID: 12651015
Description: ENCODES a protein that exhibits actin filament binding (inferred); cytoskeletal anchor activity (inferred); microtubule binding (inferred); INVOLVED IN antral ovarian follicle growth (ortholog); basement membrane organization (ortholog); initiation of primordial ovarian follicle growth (ortholog); ASSOCIATED WITH adenoid cystic carcinoma (ortholog); genetic disease (ortholog); intellectual disability (ortholog); FOUND IN actin filament (inferred); cytoplasm (inferred); cytoskeleton (inferred)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: growth arrest-specific protein 2
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: SpeTri2.0 - Squirrel SpeTri2.0 Assembly
Position:
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494740,477,656 - 40,600,129 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049366543,326,511 - 3,448,872 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049366543,326,557 - 3,448,930 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
Gas2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494740,477,656 - 40,600,129 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049366543,326,511 - 3,448,872 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049366543,326,557 - 3,448,930 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
GAS2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381122,626,002 - 22,813,055 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1122,625,509 - 22,813,001 (+)EnsemblGRCh38hg38GRCh38
GRCh371122,688,122 - 22,834,601 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361122,646,230 - 22,791,123 (+)NCBINCBI36Build 36hg18NCBI36
Build 341122,646,229 - 22,791,122NCBI
Celera1122,822,041 - 22,968,405 (+)NCBICelera
Cytogenetic Map11p14.3NCBI
HuRef1122,371,075 - 22,517,950 (+)NCBIHuRef
CHM1_11122,687,492 - 22,833,858 (+)NCBICHM1_1
T2T-CHM13v2.01122,746,758 - 22,933,721 (+)NCBIT2T-CHM13v2.0
Gas2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39751,511,560 - 51,644,753 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl751,511,763 - 51,644,723 (+)EnsemblGRCm39 Ensembl
GRCm38751,861,791 - 51,995,005 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl751,862,015 - 51,994,975 (+)EnsemblGRCm38mm10GRCm38
MGSCv37759,134,515 - 59,249,828 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36751,747,164 - 51,862,477 (+)NCBIMGSCv36mm8
Celera749,252,262 - 49,365,402 (+)NCBICelera
Cytogenetic Map7B4NCBI
cM Map732.87NCBI
Gas2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81110,587,952 - 110,721,572 (+)NCBIGRCr8
mRatBN7.21101,452,361 - 101,582,619 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1101,482,591 - 101,582,619 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1106,891,445 - 106,991,464 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01115,363,339 - 115,463,358 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01108,666,556 - 108,766,696 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01107,234,389 - 107,363,624 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1107,262,659 - 107,363,788 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01108,275,144 - 108,405,240 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41101,697,265 - 101,798,495 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera195,649,226 - 95,749,292 (+)NCBICelera
Cytogenetic Map1q22NCBI
Gas2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554763,100,479 - 3,226,262 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554763,092,461 - 3,226,269 (+)NCBIChiLan1.0ChiLan1.0
GAS2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2924,914,966 - 25,099,422 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11124,879,135 - 25,065,347 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01122,639,677 - 22,822,208 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11122,547,301 - 22,729,241 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1122,583,367 - 22,729,243 (+)Ensemblpanpan1.1panPan2
GAS2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12144,277,996 - 44,406,210 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2144,286,531 - 44,405,060 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2143,753,331 - 43,880,913 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02145,395,215 - 45,524,757 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2145,372,654 - 45,524,740 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12144,395,431 - 44,522,737 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02144,567,541 - 44,695,231 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02144,960,441 - 45,088,773 (+)NCBIUU_Cfam_GSD_1.0
GAS2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl236,711,612 - 36,885,620 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1236,712,758 - 36,885,436 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2239,823,080 - 39,928,195 (-)NCBISscrofa10.2Sscrofa10.2susScr3
GAS2
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1142,201,546 - 42,376,934 (-)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_023666038139,505,960 - 139,648,400 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Gas2
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462476613,612,702 - 13,741,606 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462476613,610,229 - 13,741,604 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSSTOT00000027418   ⟹   ENSSTOP00000017039
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
SpeTri2.0 EnsemblNW_0049366543,328,029 - 3,447,903 (+)Ensembl
RefSeq Acc Id: ENSSTOT00000041395   ⟹   ENSSTOP00000025057
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
SpeTri2.0 EnsemblNW_0049366543,326,511 - 3,448,872 (+)Ensembl
RefSeq Acc Id: XM_005335965   ⟹   XP_005336022
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440494740,477,656 - 40,600,032 (-)NCBI
SpeTri2.0NW_0049366543,326,557 - 3,448,930 (+)NCBI
Sequence:
RefSeq Acc Id: XM_040284596   ⟹   XP_040140530
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440494740,477,711 - 40,600,028 (-)NCBI
RefSeq Acc Id: XM_040284597   ⟹   XP_040140531
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440494740,477,711 - 40,600,129 (-)NCBI
RefSeq Acc Id: XM_040284598   ⟹   XP_040140532
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440494740,526,838 - 40,600,029 (-)NCBI
Protein Sequences
Protein RefSeqs XP_005336022 (Get FASTA)   NCBI Sequence Viewer  
  XP_040140530 (Get FASTA)   NCBI Sequence Viewer  
  XP_040140531 (Get FASTA)   NCBI Sequence Viewer  
  XP_040140532 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSSTOP00000017039.2
  ENSSTOP00000025057.1
GenBank Protein KAG3285579 (Get FASTA)   NCBI Sequence Viewer  
Reference Protein Sequences
RefSeq Acc Id: XP_005336022   ⟸   XM_005335965
- Peptide Label: isoform X1
- UniProtKB: I3MY43 (UniProtKB/TrEMBL),   A0A287CUS8 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_040140531   ⟸   XM_040284597
- Peptide Label: isoform X1
- UniProtKB: I3MY43 (UniProtKB/TrEMBL),   A0A287CUS8 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_040140530   ⟸   XM_040284596
- Peptide Label: isoform X1
- UniProtKB: I3MY43 (UniProtKB/TrEMBL),   A0A287CUS8 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_040140532   ⟸   XM_040284598
- Peptide Label: isoform X2
RefSeq Acc Id: ENSSTOP00000025057   ⟸   ENSSTOT00000041395
RefSeq Acc Id: ENSSTOP00000017039   ⟸   ENSSTOT00000027418
Protein Domains
Calponin-homology (CH)   GAR


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSSTOG00000019773 Ensembl, UniProtKB/TrEMBL
Ensembl Transcript ENSSTOT00000027418.2 UniProtKB/TrEMBL
  ENSSTOT00000041395.1 UniProtKB/TrEMBL
Gene3D-CATH 1.10.418.10 UniProtKB/TrEMBL
  3.30.920.20 UniProtKB/TrEMBL
InterPro CH-domain UniProtKB/TrEMBL
  CH_dom_sf UniProtKB/TrEMBL
  GAR_dom UniProtKB/TrEMBL
  GAR_dom_sf UniProtKB/TrEMBL
NCBI Gene Gas2 ENTREZGENE
PANTHER PTHR46756:SF9 UniProtKB/TrEMBL
  TRANSGELIN UniProtKB/TrEMBL
Pfam GAS2 UniProtKB/TrEMBL
  PF00307 UniProtKB/TrEMBL
PROSITE GAR UniProtKB/TrEMBL
  PS50021 UniProtKB/TrEMBL
SMART GAS2 UniProtKB/TrEMBL
  SM00033 UniProtKB/TrEMBL
Superfamily-SCOP SSF143575 UniProtKB/TrEMBL
  SSF47576 UniProtKB/TrEMBL
UniProt A0A287CUS8 ENTREZGENE, UniProtKB/TrEMBL
  I3MY43 ENTREZGENE, UniProtKB/TrEMBL