LOC101969633 (dehydrogenase/reductase SDR family member 4-like) - Rat Genome Database

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Gene: LOC101969633 (dehydrogenase/reductase SDR family member 4-like) Ictidomys tridecemlineatus
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Symbol: LOC101969633 (Ensembl: DHRS4)
Name: dehydrogenase/reductase SDR family member 4-like
RGD ID: 12648202
Description: ENCODES a protein that exhibits carbonyl reductase (NADPH) activity (inferred); oxidoreductase activity (inferred); retinal dehydrogenase activity (inferred); INVOLVED IN retinal metabolic process (inferred); FOUND IN mitochondrion (inferred); peroxisome (inferred)
Type: protein-coding
RefSeq Status: MODEL
Latest Assembly: SpeTri2.0 - Squirrel SpeTri2.0 Assembly
Position:
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440864035,895,630 - 35,907,482 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936722481,481 - 493,405 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_004936722481,510 - 493,330 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:30032202  


Genomics


Expression

RNA-SEQ Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts XM_005338747 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide JAESOR010003700 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSSTOT00000020152   ⟹   ENSSTOP00000015714
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
SpeTri2.0 EnsemblNW_004936722481,481 - 493,405 (-)Ensembl
RefSeq Acc Id: XM_005338747   ⟹   XP_005338804
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440864035,895,630 - 35,907,482 (+)NCBI
SpeTri2.0NW_004936722481,510 - 493,330 (-)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_005338804 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSSTOP00000015714.1
GenBank Protein KAG3260933 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: XP_005338804   ⟸   XM_005338747
- UniProtKB: I3MUB9 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSSTOP00000015714   ⟸   ENSSTOT00000020152


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSSTOG00000025076 Ensembl, UniProtKB/TrEMBL
Ensembl Transcript ENSSTOT00000020152.2 UniProtKB/TrEMBL
Gene3D-CATH NAD(P)-binding Rossmann-like Domain UniProtKB/TrEMBL
InterPro NAD(P)-bd_dom_sf UniProtKB/TrEMBL
  Sc_DH/Rdtase_CS UniProtKB/TrEMBL
  SDR_fam UniProtKB/TrEMBL
NCBI Gene LOC101969633 ENTREZGENE
PANTHER DEHYDROGENASE/REDUCTASE (SDR FAMILY) MEMBER 4 UniProtKB/TrEMBL
  PTHR43943:SF8 UniProtKB/TrEMBL
Pfam adh_short_C2 UniProtKB/TrEMBL
PRINTS GDHRDH UniProtKB/TrEMBL
  SDRFAMILY UniProtKB/TrEMBL
PROSITE ADH_SHORT UniProtKB/TrEMBL
Superfamily-SCOP SSF51735 UniProtKB/TrEMBL
UniProt I3MUB9 ENTREZGENE, UniProtKB/TrEMBL