Gphn (gephyrin) - Rat Genome Database

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Gene: Gphn (gephyrin) Ictidomys tridecemlineatus
Analyze
Symbol: Gphn
Name: gephyrin
RGD ID: 12647774
Description: ENCODES a protein that exhibits identical protein binding (ortholog); molecular adaptor activity (ortholog); signaling receptor binding (ortholog); INVOLVED IN establishment of protein localization (ortholog); establishment of synaptic specificity at neuromuscular junction (ortholog); gamma-aminobutyric acid receptor clustering (ortholog); PARTICIPATES IN Inhibitory synaptic transmission pathway; molybdenum cofactor biosynthetic pathway; ASSOCIATED WITH acute promyelocytic leukemia (ortholog); alcohol use disorder (ortholog); cerebral palsy (ortholog); FOUND IN cytoplasmic side of plasma membrane (ortholog); cytosol (ortholog); dendritic spine (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: gephyrin, transcript variant X1; gephyrin, transcript variant X10; gephyrin, transcript variant X11; gephyrin, transcript variant X12; gephyrin, transcript variant X13; gephyrin, transcript variant X2; gephyrin, transcript variant X3; gephyrin, transcript variant X4; gephyrin, transcript variant X5; gephyrin, transcript variant X6; gephyrin, transcript variant X7; gephyrin, transcript variant X8; gephyrin, transcript variant X9
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: SpeTri2.0 - Squirrel SpeTri2.0 Assembly
Position:
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440864063,626,233 - 64,220,771 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049364959,972,007 - 10,564,591 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049364959,970,683 - 10,565,467 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Molecular Pathway Annotations     Click to see Annotation Detail View
References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
Gphn
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440864063,626,233 - 64,220,771 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049364959,972,007 - 10,564,591 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049364959,970,683 - 10,565,467 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
GPHN
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381466,508,147 - 67,735,355 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1466,507,407 - 67,181,803 (+)EnsemblGRCh38hg38GRCh38
GRCh371466,974,865 - 67,648,520 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361466,043,878 - 66,718,278 (+)NCBINCBI36Build 36hg18NCBI36
Build 341466,044,988 - 66,718,268NCBI
Celera1447,033,183 - 47,707,584 (+)NCBICelera
Cytogenetic Map14q23.3-q24.1NCBI
HuRef1447,144,073 - 47,817,837 (+)NCBIHuRef
CHM1_11466,912,247 - 67,587,111 (+)NCBICHM1_1
T2T-CHM13v2.01460,715,132 - 61,942,473 (+)NCBIT2T-CHM13v2.0
Gphn
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391278,264,099 - 78,731,546 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1278,273,153 - 78,731,546 (+)EnsemblGRCm39 Ensembl
GRCm381278,217,325 - 78,684,772 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1278,226,379 - 78,684,772 (+)EnsemblGRCm38mm10GRCm38
MGSCv371279,327,642 - 79,785,759 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361279,145,574 - 79,603,578 (+)NCBIMGSCv36mm8
Celera1279,690,472 - 80,148,022 (+)NCBICelera
Cytogenetic Map12C3NCBI
cM Map1235.51NCBI
Gphn
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr86102,687,405 - 103,216,679 (+)NCBIGRCr8
mRatBN7.2696,954,365 - 97,483,617 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl696,892,148 - 97,483,612 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx697,388,022 - 97,920,426 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0697,687,169 - 98,219,588 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0697,077,693 - 97,599,233 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.06101,327,874 - 101,859,169 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl6101,532,518 - 101,859,164 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.06111,210,069 - 111,237,661 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Rnor_5.06110,709,516 - 111,190,440 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.46100,833,004 - 101,302,957 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.16100,836,459 - 101,306,408 (+)NCBI
Celera695,358,601 - 95,872,910 (+)NCBICelera
Cytogenetic Map6q24NCBI
Gphn
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554663,016,479 - 3,526,231 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554663,017,474 - 3,526,375 (-)NCBIChiLan1.0ChiLan1.0
GPHN
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21567,610,429 - 68,285,563 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11466,828,972 - 67,502,075 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01447,081,527 - 47,755,182 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11465,963,473 - 66,634,550 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1466,137,166 - 66,634,550 (+)Ensemblpanpan1.1panPan2
GPHN
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1840,585,625 - 41,204,007 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl840,585,883 - 41,203,245 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha840,270,522 - 40,895,744 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0840,807,578 - 41,430,716 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl840,807,424 - 41,430,706 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1840,427,159 - 41,049,600 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0840,497,926 - 41,123,844 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0840,856,432 - 41,482,422 (+)NCBIUU_Cfam_GSD_1.0
GPHN
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl790,346,714 - 90,916,455 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1790,345,726 - 90,913,625 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2796,902,547 - 97,222,781 (+)NCBISscrofa10.2Sscrofa10.2susScr3
GPHN
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12443,702,384 - 44,421,890 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2443,880,344 - 44,422,276 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366605331,896,980 - 32,651,860 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Gphn
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462473433,870,997 - 34,483,508 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462473433,871,664 - 34,483,770 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression

RNA-SEQ Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts XM_005322802 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_005322805 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021724803 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021724805 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021724806 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021724807 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021724808 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021724809 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021724810 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021724811 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021724812 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021724813 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021724815 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_040276068 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_040276069 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_040276070 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_040276071 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_040276072 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_040276073 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_040276074 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_040276075 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_040276076 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_040276077 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_040276078 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_040276079 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_040276080 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_040276081 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_040276082 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_040276083 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_040276084 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_040276085 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_040276086 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_040276087 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_040276088 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_040276089 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_040276090 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide JAESOR010003700 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSSTOT00000001534   ⟹   ENSSTOP00000001373
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
SpeTri2.0 EnsemblNW_0049364959,972,007 - 10,564,591 (+)Ensembl
Ensembl Acc Id: ENSSTOT00000035495   ⟹   ENSSTOP00000029814
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
SpeTri2.0 EnsemblNW_00493649510,123,089 - 10,564,591 (+)Ensembl
Ensembl Acc Id: ENSSTOT00000041040   ⟹   ENSSTOP00000026292
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
SpeTri2.0 EnsemblNW_00493649510,123,089 - 10,564,591 (+)Ensembl
RefSeq Acc Id: XM_005322802   ⟹   XP_005322859
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440864063,626,233 - 64,220,771 (-)NCBI
SpeTri2.0NW_0049364959,970,687 - 10,565,467 (+)NCBI
Sequence:
RefSeq Acc Id: XM_005322805   ⟹   XP_005322862
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440864063,626,233 - 64,220,076 (-)NCBI
SpeTri2.0NW_0049364959,970,686 - 10,565,309 (+)NCBI
Sequence:
RefSeq Acc Id: XM_021724803   ⟹   XP_021580478
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440864063,626,233 - 64,220,081 (-)NCBI
SpeTri2.0NW_0049364959,970,683 - 10,565,309 (+)NCBI
Sequence:
RefSeq Acc Id: XM_021724806   ⟹   XP_021580481
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440864063,626,233 - 64,220,080 (-)NCBI
SpeTri2.0NW_0049364959,970,683 - 10,565,309 (+)NCBI
Sequence:
RefSeq Acc Id: XM_021724808   ⟹   XP_021580483
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440864063,626,233 - 64,220,079 (-)NCBI
SpeTri2.0NW_0049364959,970,684 - 10,565,309 (+)NCBI
Sequence:
RefSeq Acc Id: XM_021724809   ⟹   XP_021580484
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440864063,626,233 - 64,220,080 (-)NCBI
SpeTri2.0NW_0049364959,970,684 - 10,565,309 (+)NCBI
Sequence:
RefSeq Acc Id: XM_021724811   ⟹   XP_021580486
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440864063,626,233 - 64,220,078 (-)NCBI
SpeTri2.0NW_0049364959,970,684 - 10,565,309 (+)NCBI
Sequence:
RefSeq Acc Id: XM_021724812   ⟹   XP_021580487
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440864063,626,233 - 64,220,077 (-)NCBI
SpeTri2.0NW_0049364959,970,684 - 10,565,309 (+)NCBI
Sequence:
RefSeq Acc Id: XM_021724813   ⟹   XP_021580488
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440864063,626,233 - 64,220,075 (-)NCBI
SpeTri2.0NW_0049364959,970,685 - 10,565,309 (+)NCBI
Sequence:
RefSeq Acc Id: XM_021724815   ⟹   XP_021580490
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440864063,626,233 - 64,220,082 (-)NCBI
SpeTri2.0NW_0049364959,970,685 - 10,565,309 (+)NCBI
Sequence:
RefSeq Acc Id: XM_040276068   ⟹   XP_040132002
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440864063,626,233 - 64,220,084 (-)NCBI
RefSeq Acc Id: XM_040276069   ⟹   XP_040132003
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440864063,626,233 - 64,220,083 (-)NCBI
RefSeq Acc Id: XM_040276070   ⟹   XP_040132004
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440864063,626,233 - 64,220,082 (-)NCBI
RefSeq Acc Id: XM_040276071   ⟹   XP_040132005
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440864063,626,233 - 64,220,083 (-)NCBI
RefSeq Acc Id: XM_040276072   ⟹   XP_040132006
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440864063,626,233 - 64,220,083 (-)NCBI
RefSeq Acc Id: XM_040276073   ⟹   XP_040132007
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440864063,626,233 - 64,220,083 (-)NCBI
RefSeq Acc Id: XM_040276074   ⟹   XP_040132008
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440864063,626,233 - 64,220,082 (-)NCBI
RefSeq Acc Id: XM_040276075   ⟹   XP_040132009
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440864063,626,233 - 64,220,082 (-)NCBI
RefSeq Acc Id: XM_040276076   ⟹   XP_040132010
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440864063,626,233 - 64,220,081 (-)NCBI
RefSeq Acc Id: XM_040276077   ⟹   XP_040132011
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440864063,626,233 - 64,220,082 (-)NCBI
RefSeq Acc Id: XM_040276078   ⟹   XP_040132012
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440864063,626,233 - 64,220,082 (-)NCBI
RefSeq Acc Id: XM_040276079   ⟹   XP_040132013
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440864063,626,233 - 64,220,082 (-)NCBI
RefSeq Acc Id: XM_040276080   ⟹   XP_040132014
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440864063,626,233 - 64,220,082 (-)NCBI
RefSeq Acc Id: XM_040276081   ⟹   XP_040132015
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440864063,626,233 - 64,220,079 (-)NCBI
RefSeq Acc Id: XM_040276082   ⟹   XP_040132016
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440864063,626,233 - 64,220,081 (-)NCBI
RefSeq Acc Id: XM_040276083   ⟹   XP_040132017
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440864063,626,233 - 64,220,081 (-)NCBI
RefSeq Acc Id: XM_040276084   ⟹   XP_040132018
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440864063,626,233 - 64,220,080 (-)NCBI
RefSeq Acc Id: XM_040276085   ⟹   XP_040132019
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440864063,626,233 - 64,220,082 (-)NCBI
RefSeq Acc Id: XM_040276086   ⟹   XP_040132020
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440864063,626,233 - 64,220,077 (-)NCBI
RefSeq Acc Id: XM_040276087   ⟹   XP_040132021
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440864063,626,233 - 64,220,082 (-)NCBI
RefSeq Acc Id: XM_040276088   ⟹   XP_040132022
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440864063,626,233 - 64,220,082 (-)NCBI
RefSeq Acc Id: XM_040276089   ⟹   XP_040132023
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440864063,626,233 - 64,220,082 (-)NCBI
RefSeq Acc Id: XM_040276090   ⟹   XP_040132024
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440864063,626,233 - 64,220,076 (-)NCBI
Protein Sequences
Protein RefSeqs XP_005322859 (Get FASTA)   NCBI Sequence Viewer  
  XP_005322862 (Get FASTA)   NCBI Sequence Viewer  
  XP_021580478 (Get FASTA)   NCBI Sequence Viewer  
  XP_021580481 (Get FASTA)   NCBI Sequence Viewer  
  XP_021580483 (Get FASTA)   NCBI Sequence Viewer  
  XP_021580484 (Get FASTA)   NCBI Sequence Viewer  
  XP_021580486 (Get FASTA)   NCBI Sequence Viewer  
  XP_021580487 (Get FASTA)   NCBI Sequence Viewer  
  XP_021580488 (Get FASTA)   NCBI Sequence Viewer  
  XP_021580490 (Get FASTA)   NCBI Sequence Viewer  
  XP_040132002 (Get FASTA)   NCBI Sequence Viewer  
  XP_040132003 (Get FASTA)   NCBI Sequence Viewer  
  XP_040132004 (Get FASTA)   NCBI Sequence Viewer  
  XP_040132005 (Get FASTA)   NCBI Sequence Viewer  
  XP_040132006 (Get FASTA)   NCBI Sequence Viewer  
  XP_040132007 (Get FASTA)   NCBI Sequence Viewer  
  XP_040132008 (Get FASTA)   NCBI Sequence Viewer  
  XP_040132009 (Get FASTA)   NCBI Sequence Viewer  
  XP_040132010 (Get FASTA)   NCBI Sequence Viewer  
  XP_040132011 (Get FASTA)   NCBI Sequence Viewer  
  XP_040132012 (Get FASTA)   NCBI Sequence Viewer  
  XP_040132013 (Get FASTA)   NCBI Sequence Viewer  
  XP_040132014 (Get FASTA)   NCBI Sequence Viewer  
  XP_040132015 (Get FASTA)   NCBI Sequence Viewer  
  XP_040132016 (Get FASTA)   NCBI Sequence Viewer  
  XP_040132017 (Get FASTA)   NCBI Sequence Viewer  
  XP_040132018 (Get FASTA)   NCBI Sequence Viewer  
  XP_040132019 (Get FASTA)   NCBI Sequence Viewer  
  XP_040132020 (Get FASTA)   NCBI Sequence Viewer  
  XP_040132021 (Get FASTA)   NCBI Sequence Viewer  
  XP_040132022 (Get FASTA)   NCBI Sequence Viewer  
  XP_040132023 (Get FASTA)   NCBI Sequence Viewer  
  XP_040132024 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSSTOP00000001373.3
  ENSSTOP00000026292.1
  ENSSTOP00000029814.1
GenBank Protein KAG3261268 (Get FASTA)   NCBI Sequence Viewer  
  KAG3261269 (Get FASTA)   NCBI Sequence Viewer  
  KAG3261270 (Get FASTA)   NCBI Sequence Viewer  
  KAG3261271 (Get FASTA)   NCBI Sequence Viewer  
  KAG3261272 (Get FASTA)   NCBI Sequence Viewer  
  KAG3261273 (Get FASTA)   NCBI Sequence Viewer  
  KAG3261274 (Get FASTA)   NCBI Sequence Viewer  
  KAG3261275 (Get FASTA)   NCBI Sequence Viewer  
  KAG3261276 (Get FASTA)   NCBI Sequence Viewer  
  KAG3261277 (Get FASTA)   NCBI Sequence Viewer  
  KAG3261278 (Get FASTA)   NCBI Sequence Viewer  
  KAG3261279 (Get FASTA)   NCBI Sequence Viewer  
  KAG3261280 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: XP_005322859   ⟸   XM_005322802
- Peptide Label: isoform X32
- Sequence:
RefSeq Acc Id: XP_005322862   ⟸   XM_005322805
- Peptide Label: isoform X28
- UniProtKB: A0A287D8F7 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_021580478   ⟸   XM_021724803
- Peptide Label: isoform X14
- UniProtKB: A0A287D8F7 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_021580481   ⟸   XM_021724806
- Peptide Label: isoform X16
- UniProtKB: A0A287CYA6 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_021580483   ⟸   XM_021724808
- Peptide Label: isoform X19
- UniProtKB: A0A287D8F7 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_021580484   ⟸   XM_021724809
- Peptide Label: isoform X20
- UniProtKB: A0A287D8F7 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_021580486   ⟸   XM_021724811
- Peptide Label: isoform X23
- UniProtKB: A0A287D8F7 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_021580487   ⟸   XM_021724812
- Peptide Label: isoform X25
- UniProtKB: A0A287CYA6 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_021580490   ⟸   XM_021724815
- Peptide Label: isoform X31
- UniProtKB: A0A287D8F7 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_021580488   ⟸   XM_021724813
- Peptide Label: isoform X29
- UniProtKB: I3LYR7 (UniProtKB/TrEMBL),   A0A287CYA6 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_040132002   ⟸   XM_040276068
- Peptide Label: isoform X1
- UniProtKB: A0A287CYA6 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_040132007   ⟸   XM_040276073
- Peptide Label: isoform X6
- UniProtKB: A0A287CYA6 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_040132005   ⟸   XM_040276071
- Peptide Label: isoform X4
- UniProtKB: A0A287D8F7 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_040132006   ⟸   XM_040276072
- Peptide Label: isoform X5
- UniProtKB: A0A287CYA6 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_040132003   ⟸   XM_040276069
- Peptide Label: isoform X2
- UniProtKB: A0A287CYA6 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_040132023   ⟸   XM_040276089
- Peptide Label: isoform X30
- UniProtKB: A0A287D8F7 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_040132022   ⟸   XM_040276088
- Peptide Label: isoform X27
- UniProtKB: A0A287CYA6 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_040132021   ⟸   XM_040276087
- Peptide Label: isoform X26
- UniProtKB: A0A287CYA6 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_040132004   ⟸   XM_040276070
- Peptide Label: isoform X3
- UniProtKB: A0A287CYA6 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_040132019   ⟸   XM_040276085
- Peptide Label: isoform X22
- UniProtKB: A0A287D8F7 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_040132013   ⟸   XM_040276079
- Peptide Label: isoform X12
- UniProtKB: A0A287D8F7 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_040132012   ⟸   XM_040276078
- Peptide Label: isoform X11
- UniProtKB: A0A287D8F7 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_040132014   ⟸   XM_040276080
- Peptide Label: isoform X13
- UniProtKB: A0A287CYA6 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_040132011   ⟸   XM_040276077
- Peptide Label: isoform X10
- UniProtKB: A0A287D8F7 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_040132008   ⟸   XM_040276074
- Peptide Label: isoform X7
- UniProtKB: A0A287D8F7 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_040132009   ⟸   XM_040276075
- Peptide Label: isoform X8
- UniProtKB: A0A287CYA6 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_040132010   ⟸   XM_040276076
- Peptide Label: isoform X9
- UniProtKB: A0A287CYA6 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_040132017   ⟸   XM_040276083
- Peptide Label: isoform X18
- UniProtKB: A0A287D8F7 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_040132016   ⟸   XM_040276082
- Peptide Label: isoform X17
- UniProtKB: A0A287D8F7 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_040132018   ⟸   XM_040276084
- Peptide Label: isoform X21
- UniProtKB: A0A287D8F7 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_040132015   ⟸   XM_040276081
- Peptide Label: isoform X15
- UniProtKB: A0A287CYA6 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_040132020   ⟸   XM_040276086
- Peptide Label: isoform X24
- UniProtKB: A0A287CYA6 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_040132024   ⟸   XM_040276090
- Peptide Label: isoform X33
- UniProtKB: A0A287CYA6 (UniProtKB/TrEMBL)
Ensembl Acc Id: ENSSTOP00000026292   ⟸   ENSSTOT00000041040
Ensembl Acc Id: ENSSTOP00000001373   ⟸   ENSSTOT00000001534
Ensembl Acc Id: ENSSTOP00000029814   ⟸   ENSSTOT00000035495
Protein Domains
MoaB/Mog


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSSTOG00000001535 Ensembl, UniProtKB/TrEMBL
Ensembl Transcript ENSSTOT00000001534.3 UniProtKB/TrEMBL
  ENSSTOT00000035495.1 UniProtKB/TrEMBL
  ENSSTOT00000041040.1 UniProtKB/TrEMBL
Gene3D-CATH 2.40.340.10 UniProtKB/TrEMBL
  3.40.980.10 UniProtKB/TrEMBL
  Molybdopterin biosynthesis moea protein, domain 2 UniProtKB/TrEMBL
  Molybdopterin biosynthesis moea protein, domain 3 UniProtKB/TrEMBL
InterPro MoaB/Mog-like_dom_sf UniProtKB/TrEMBL
  MoaB/Mog_dom UniProtKB/TrEMBL
  MoCF_biosynth_CS UniProtKB/TrEMBL
  MoeA-like UniProtKB/TrEMBL
  MoeA_C_domain_IV UniProtKB/TrEMBL
  MoeA_C_domain_IV_sf UniProtKB/TrEMBL
  MoeA_linker/N UniProtKB/TrEMBL
  MoeA_linker/N_sf UniProtKB/TrEMBL
NCBI Gene Gphn ENTREZGENE
PANTHER GEPHYRIN UniProtKB/TrEMBL
  PTHR10192 UniProtKB/TrEMBL
Pfam MoCF_biosynth UniProtKB/TrEMBL
  MoeA_C UniProtKB/TrEMBL
  MoeA_N UniProtKB/TrEMBL
PROSITE MOCF_BIOSYNTHESIS_1 UniProtKB/TrEMBL
  MOCF_BIOSYNTHESIS_2 UniProtKB/TrEMBL
SMART MoCF_biosynth UniProtKB/TrEMBL
Superfamily-SCOP SSF53218 UniProtKB/TrEMBL
  SSF63867 UniProtKB/TrEMBL
  SSF63882 UniProtKB/TrEMBL
UniProt A0A287CYA6 ENTREZGENE, UniProtKB/TrEMBL
  A0A287D8F7 ENTREZGENE, UniProtKB/TrEMBL
  I3LYR7 ENTREZGENE, UniProtKB/TrEMBL