Tas2r16 (taste 2 receptor member 16) - Rat Genome Database

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Gene: Tas2r16 (taste 2 receptor member 16) Ictidomys tridecemlineatus
Analyze
Symbol: Tas2r16
Name: taste 2 receptor member 16
RGD ID: 12646458
Description: ENCODES a protein that exhibits bitter taste receptor activity (ortholog); INVOLVED IN detection of chemical stimulus involved in sensory perception of bitter taste (ortholog); ASSOCIATED WITH alcohol dependence (ortholog); alcohol use disorder (ortholog); genetic disease (ortholog); FOUND IN endoplasmic reticulum (ortholog); external side of plasma membrane (ortholog); trans-Golgi network (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: taste receptor type 2 member 16
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: SpeTri2.0 - Squirrel SpeTri2.0 Assembly
Position:
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440511849,804,785 - 49,805,690 (-)NCBIHiC_Itri_2
SpeTri2.0NW_0049366052,398,240 - 2,399,145 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
Tas2r16
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440511849,804,785 - 49,805,690 (-)NCBIHiC_Itri_2
SpeTri2.0NW_0049366052,398,240 - 2,399,145 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
TAS2R16
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh387122,994,704 - 122,995,700 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl7122,994,704 - 122,995,700 (-)EnsemblGRCh38hg38GRCh38
GRCh377122,634,758 - 122,635,754 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 367122,421,995 - 122,422,990 (-)NCBINCBI36Build 36hg18NCBI36
Build 347122,228,763 - 122,229,639NCBI
Celera7117,439,504 - 117,440,499 (-)NCBICelera
Cytogenetic Map7q31.32NCBI
HuRef7116,997,714 - 116,998,709 (-)NCBIHuRef
CHM1_17122,568,066 - 122,569,061 (-)NCBICHM1_1
T2T-CHM13v2.07124,311,252 - 124,312,248 (-)NCBIT2T-CHM13v2.0
CRA_TCAGchr7v27122,023,644 - 122,024,639 (-)NCBI
Tas2r118
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39623,969,160 - 23,970,059 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl623,969,160 - 23,970,059 (-)EnsemblGRCm39 Ensembl
GRCm38623,969,161 - 23,970,060 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl623,969,161 - 23,970,060 (-)EnsemblGRCm38mm10GRCm38
MGSCv37623,919,161 - 23,920,060 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36623,919,163 - 23,920,062 (-)NCBIMGSCv36mm8
Celera623,993,940 - 23,994,839 (-)NCBICelera
Cytogenetic Map6A3.1NCBI
cM Map611.18NCBI
Tas2r118
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8453,414,815 - 53,415,714 (-)NCBIGRCr8
mRatBN7.2452,449,208 - 52,450,107 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl452,449,208 - 52,450,107 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx457,436,130 - 57,437,029 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0453,350,306 - 53,351,205 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0451,778,870 - 51,779,769 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0451,002,218 - 51,003,117 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl451,002,218 - 51,003,117 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0450,781,192 - 50,782,091 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4450,342,537 - 50,343,436 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1450,573,110 - 50,574,010 (-)NCBI
Celera447,635,254 - 47,636,153 (-)NCBICelera
Cytogenetic Map4q22NCBI
Tas2r16
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0NW_0049554794,591,015 - 4,591,920 (-)NCBIChiLan1.0ChiLan1.0
TAS2R16
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v26159,864,811 - 159,865,807 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1711,875,065 - 11,876,061 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v07115,003,966 - 115,004,950 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.17127,687,850 - 127,688,834 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl7127,687,899 - 127,688,774 (-)Ensemblpanpan1.1panPan2
TAS2R16
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1824,286,430 - 24,287,332 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11824,281,944 - 24,290,222 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21825,883,118 - 25,884,436 (+)NCBISscrofa10.2Sscrofa10.2susScr3
TAS2R16
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12191,781,827 - 91,785,831 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2191,783,091 - 91,783,963 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366604211,700,462 - 11,701,899 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Tas2r16
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_00462478312,993,230 - 12,994,135 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts XM_005333958 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide JAESOR010000177 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: XM_005333958   ⟹   XP_005334015
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440511849,804,785 - 49,805,690 (-)NCBI
SpeTri2.0NW_0049366052,398,240 - 2,399,145 (+)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_005334015 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein KAG3277721 (Get FASTA)   NCBI Sequence Viewer  
Reference Protein Sequences
RefSeq Acc Id: XP_005334015   ⟸   XM_005333958
- Sequence:


Additional Information

Database Acc Id Source(s)
NCBI Gene Tas2r16 ENTREZGENE