Kif16b (kinesin family member 16B) - Rat Genome Database

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Gene: Kif16b (kinesin family member 16B) Ictidomys tridecemlineatus
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Symbol: Kif16b
Name: kinesin family member 16B
RGD ID: 12644520
Description: ENCODES a protein that exhibits ATP-dependent microtubule motor activity, plus-end-directed (ortholog); phosphatidylinositol-3,4,5-trisphosphate binding (ortholog); phosphatidylinositol-3,4-bisphosphate binding (ortholog); INVOLVED IN cellular response to interferon-gamma (ortholog); early endosome to late endosome transport (ortholog); endoderm development (ortholog); ASSOCIATED WITH intellectual disability (ortholog); prostate cancer (ortholog); FOUND IN cytoplasm (ortholog); early endosome (ortholog); endosome (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Also known as: kinesin-like protein KIF16B
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: SpeTri2.0 - Squirrel SpeTri2.0 Assembly
Position:
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024408640155,012,499 - 155,294,440 (+)NCBI
SpeTri2.0NW_0049364853,443,878 - 3,728,613 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

Comparative Map Data
Kif16b
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024408640155,012,499 - 155,294,440 (+)NCBI
SpeTri2.0NW_0049364853,443,878 - 3,728,613 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
KIF16B
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl2016,272,104 - 16,573,434 (-)EnsemblGRCh38hg38GRCh38
GRCh38.p13 Ensembl2016,272,104 - 16,573,448 (-)EnsemblGRCh38hg38GRCh38
GRCh382016,272,104 - 16,573,457 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh372016,252,749 - 16,554,093 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 362016,200,749 - 16,502,078 (-)NCBINCBI36hg18NCBI36
Celera2016,327,872 - 16,629,179 (-)NCBI
Cytogenetic Map20p12.1NCBI
HuRef2016,214,467 - 16,516,712 (-)NCBIHuRef
CHM1_12016,252,472 - 16,554,080 (-)NCBICHM1_1
Kif16b
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm392142,460,260 - 142,743,535 (-)NCBIGRCm39mm39
GRCm39 Ensembl2142,459,394 - 142,743,451 (-)Ensembl
GRCm382142,618,340 - 142,901,609 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl2142,617,474 - 142,901,531 (-)EnsemblGRCm38mm10GRCm38
MGSCv372142,444,081 - 142,727,200 (-)NCBIGRCm37mm9NCBIm37
MGSCv362142,309,786 - 142,592,905 (-)NCBImm8
Celera2143,799,300 - 144,080,607 (-)NCBICelera
Cytogenetic Map2G1NCBI
Kif16b
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.23129,974,692 - 130,254,194 (-)NCBI
Rnor_6.0 Ensembl3136,657,480 - 136,936,674 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.03136,596,621 - 136,936,809 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.03143,103,727 - 143,381,598 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.43130,967,515 - 131,250,402 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.13130,874,500 - 131,130,642 (-)NCBI
Celera3128,908,978 - 129,180,308 (-)NCBICelera
Cytogenetic Map3q41NCBI
Kif16b
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495541525,447,539 - 25,740,775 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495541525,449,734 - 25,740,697 (-)NCBIChiLan1.0ChiLan1.0
KIF16B
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.12016,210,821 - 16,512,618 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2016,210,821 - 16,512,618 (-)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v02016,229,429 - 16,532,735 (-)NCBIMhudiblu_PPA_v0panPan3
KIF16B
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1246,260,558 - 6,576,544 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl246,261,553 - 6,575,845 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha246,126,588 - 6,442,971 (+)NCBI
ROS_Cfam_1.0246,666,622 - 6,989,878 (+)NCBI
UMICH_Zoey_3.1246,276,871 - 6,576,736 (+)NCBI
UNSW_CanFamBas_1.0246,372,345 - 6,688,664 (+)NCBI
UU_Cfam_GSD_1.0246,648,582 - 6,963,507 (+)NCBI
KIF16B
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1724,871,985 - 25,188,204 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11724,882,139 - 25,188,990 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21728,210,127 - 28,417,272 (-)NCBISscrofa10.2Sscrofa10.2susScr3
KIF16B
(Chlorocebus sabaeus - African green monkey)
Vervet AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1245,189,908 - 45,495,837 (-)NCBI
ChlSab1.1 Ensembl245,189,756 - 45,495,725 (-)Ensembl
Kif16b
(Heterocephalus glaber - naked mole-rat)
Molerat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_00462474117,424,335 - 17,750,531 (-)NCBI


Expression


Sequence


Reference Sequences
RefSeq Acc Id: XM_005320456   ⟹   XP_005320513
RefSeq Status:
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_024408640155,012,572 - 155,294,440 (+)NCBI
SpeTri2.0NW_0049364853,443,944 - 3,728,613 (+)NCBI
Sequence:
RefSeq Acc Id: XM_005320457   ⟹   XP_005320514
RefSeq Status:
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_024408640155,012,499 - 155,294,440 (+)NCBI
SpeTri2.0NW_0049364853,443,878 - 3,725,802 (+)NCBI
Sequence:
RefSeq Acc Id: XM_013356465   ⟹   XP_013211919
RefSeq Status:
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
SpeTri2.0NW_0049364853,443,937 - 3,635,682 (+)NCBI
Sequence:
RefSeq Acc Id: XM_021723145   ⟹   XP_021578820
RefSeq Status:
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
SpeTri2.0NW_0049364853,443,878 - 3,635,687 (+)NCBI
Sequence:
RefSeq Acc Id: XM_040276576   ⟹   XP_040132510
RefSeq Status:
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_024408640155,012,564 - 155,206,114 (+)NCBI
RefSeq Acc Id: XM_040276577   ⟹   XP_040132511
RefSeq Status:
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_024408640155,012,499 - 155,206,114 (+)NCBI
RefSeq Acc Id: XM_040276578   ⟹   XP_040132512
RefSeq Status:
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_024408640155,143,400 - 155,206,114 (+)NCBI
RefSeq Acc Id: XM_040276579   ⟹   XP_040132513
RefSeq Status:
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_024408640155,012,571 - 155,258,297 (+)NCBI
RefSeq Acc Id: XM_040276580   ⟹   XP_040132514
RefSeq Status:
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_024408640155,012,572 - 155,294,440 (+)NCBI
RefSeq Acc Id: XM_040276581   ⟹   XP_040132515
RefSeq Status:
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_024408640155,012,571 - 155,294,440 (+)NCBI
RefSeq Acc Id: XM_040276582   ⟹   XP_040132516
RefSeq Status:
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_024408640155,147,183 - 155,206,114 (+)NCBI
RefSeq Acc Id: XM_040276583   ⟹   XP_040132517
RefSeq Status:
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_024408640155,147,183 - 155,206,114 (+)NCBI
Reference Sequences
RefSeq Acc Id: XP_005320514   ⟸   XM_005320457
- Peptide Label: isoform X5
- UniProtKB: A0A287D032 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_013211919   ⟸   XM_013356465
- Peptide Label: isoform X3
- Sequence:
RefSeq Acc Id: XP_005320513   ⟸   XM_005320456
- Peptide Label: isoform X4
- UniProtKB: I3NAR4 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_021578820   ⟸   XM_021723145
- Peptide Label: isoform X4
- Sequence:
RefSeq Acc Id: XP_040132511   ⟸   XM_040276577
- Peptide Label: isoform X2
RefSeq Acc Id: XP_040132510   ⟸   XM_040276576
- Peptide Label: isoform X1
RefSeq Acc Id: XP_040132515   ⟸   XM_040276581
- Peptide Label: isoform X8
RefSeq Acc Id: XP_040132513   ⟸   XM_040276579
- Peptide Label: isoform X6
RefSeq Acc Id: XP_040132514   ⟸   XM_040276580
- Peptide Label: isoform X7
RefSeq Acc Id: XP_040132512   ⟸   XM_040276578
- Peptide Label: isoform X3
RefSeq Acc Id: XP_040132516   ⟸   XM_040276582
- Peptide Label: isoform X9
RefSeq Acc Id: XP_040132517   ⟸   XM_040276583
- Peptide Label: isoform X10
Protein Domains
Kinesin motor   PX


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSSTOG00000027860 ENTREZGENE, UniProtKB/TrEMBL
Ensembl Protein ENSSTOP00000021461 ENTREZGENE, UniProtKB/TrEMBL
  ENSSTOP00000026888 ENTREZGENE, UniProtKB/TrEMBL
  ENSSTOP00000030403 UniProtKB/TrEMBL
Ensembl Transcript ENSSTOT00000021777 UniProtKB/TrEMBL
  ENSSTOT00000031633 UniProtKB/TrEMBL
  ENSSTOT00000043198 UniProtKB/TrEMBL
Gene3D-CATH 3.30.1520.10 UniProtKB/TrEMBL
  3.40.850.10 UniProtKB/TrEMBL
InterPro Kinesin-like_fam UniProtKB/TrEMBL
  Kinesin_motor_CS UniProtKB/TrEMBL
  Kinesin_motor_dom UniProtKB/TrEMBL
  Kinesin_motor_dom_sf UniProtKB/TrEMBL
  P-loop_NTPase UniProtKB/TrEMBL
  Phox UniProtKB/TrEMBL
  PX_dom_sf UniProtKB/TrEMBL
  SMAD_FHA_dom_sf UniProtKB/TrEMBL
NCBI Gene Kif16b ENTREZGENE
PANTHER PTHR24115 UniProtKB/TrEMBL
Pfam Kinesin UniProtKB/TrEMBL
  PF00787 UniProtKB/TrEMBL
PRINTS KINESINHEAVY UniProtKB/TrEMBL
PROSITE KINESIN_MOTOR_1 UniProtKB/TrEMBL
  KINESIN_MOTOR_2 UniProtKB/TrEMBL
  PS50195 UniProtKB/TrEMBL
SMART KISc UniProtKB/TrEMBL
  SM00312 UniProtKB/TrEMBL
Superfamily-SCOP SSF49879 UniProtKB/TrEMBL
  SSF52540 UniProtKB/TrEMBL
  SSF64268 UniProtKB/TrEMBL
UniProt A0A287D032 ENTREZGENE, UniProtKB/TrEMBL
  A0A287DA30_ICTTR UniProtKB/TrEMBL
  I3NAR4 ENTREZGENE, UniProtKB/TrEMBL