Cnnm2 (cyclin and CBS domain divalent metal cation transport mediator 2) - Rat Genome Database

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Gene: Cnnm2 (cyclin and CBS domain divalent metal cation transport mediator 2) Ictidomys tridecemlineatus
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Symbol: Cnnm2
Name: cyclin and CBS domain divalent metal cation transport mediator 2
RGD ID: 12643935
Description: ENCODES a protein that exhibits ATP binding (ortholog); magnesium ion transmembrane transporter activity (ortholog); INVOLVED IN magnesium ion homeostasis (ortholog); magnesium ion transport (ortholog); ASSOCIATED WITH Cardiac Arrhythmias (ortholog); hereditary spastic paraplegia 45 (ortholog); Hypomagnesemia, Seizures, and Mental Retardation 1 (ortholog); FOUND IN basolateral plasma membrane (ortholog); intracellular membrane-bounded organelle (ortholog); plasma membrane (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Also known as: cyclin M2; metal transporter CNNM2
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: SpeTri2.0 - Squirrel SpeTri2.0 Assembly
Position:
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440721331,295,088 - 31,433,123 (-)NCBI
SpeTri2.0NW_0049366002,898,321 - 3,037,414 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References

Genomics

Comparative Map Data
Cnnm2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440721331,295,088 - 31,433,123 (-)NCBI
SpeTri2.0NW_0049366002,898,321 - 3,037,414 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
CNNM2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl10102,918,294 - 103,090,222 (+)EnsemblGRCh38hg38GRCh38
GRCh3810102,918,294 - 103,090,222 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh3710104,678,051 - 104,849,979 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 3610104,668,104 - 104,828,231 (+)NCBINCBI36hg18NCBI36
Celera1098,418,329 - 98,578,461 (+)NCBI
Cytogenetic Map10q24.32NCBI
HuRef1098,312,430 - 98,472,855 (+)NCBIHuRef
CHM1_110104,960,909 - 105,121,224 (+)NCBICHM1_1
Cnnm2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391946,745,273 - 46,867,019 (+)NCBIGRCm39mm39
GRCm39 Ensembl1946,750,035 - 46,868,631 (+)Ensembl
GRCm381946,756,834 - 46,878,580 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1946,761,596 - 46,880,192 (+)EnsemblGRCm38mm10GRCm38
MGSCv371946,836,099 - 46,953,070 (+)NCBIGRCm37mm9NCBIm37
MGSCv361946,815,608 - 46,931,891 (+)NCBImm8
Celera1947,530,523 - 47,648,072 (+)NCBICelera
Cytogenetic Map19C3NCBI
cM Map1938.97NCBI
Cnnm2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.21245,643,682 - 245,769,542 (+)NCBImRatBN7.2
Rnor_6.0 Ensembl1266,530,477 - 266,649,398 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.01266,530,421 - 266,651,292 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01273,961,251 - 274,081,226 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41252,077,259 - 252,195,971 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11252,340,413 - 252,459,140 (+)NCBI
Celera1241,415,759 - 241,534,698 (+)NCBICelera
Cytogenetic Map1q54NCBI
Cnnm2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554857,403,549 - 7,545,987 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554857,399,085 - 7,546,176 (-)NCBIChiLan1.0ChiLan1.0
CNNM2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.110102,981,911 - 103,138,886 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl10102,982,148 - 103,137,580 (+)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v01099,519,187 - 99,687,138 (+)NCBIMhudiblu_PPA_v0panPan3
CNNM2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12815,366,035 - 15,515,261 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2815,366,601 - 15,514,886 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2815,538,133 - 15,686,874 (+)NCBI
ROS_Cfam_1.02815,841,070 - 15,990,412 (+)NCBI
UMICH_Zoey_3.12815,384,679 - 15,540,273 (+)NCBI
UNSW_CanFamBas_1.02815,423,855 - 15,571,651 (+)NCBI
UU_Cfam_GSD_1.02815,556,906 - 15,706,273 (+)NCBI
CNNM2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl14113,890,149 - 114,053,352 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.114113,888,970 - 114,060,369 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.214123,856,499 - 124,030,358 (+)NCBISscrofa10.2Sscrofa10.2susScr3
CNNM2
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1995,956,224 - 96,130,714 (+)NCBI
ChlSab1.1 Ensembl995,955,654 - 96,122,976 (+)Ensembl
Vero_WHO_p1.0NW_02366604857,068,214 - 57,244,730 (+)NCBI
Cnnm2
(Heterocephalus glaber - naked mole-rat)
Naked Mole-rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046248312,219,764 - 2,370,005 (+)NCBI


Expression


Sequence


Reference Sequences
RefSeq Acc Id: XM_005333610   ⟹   XP_005333667
RefSeq Status:
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440721331,295,088 - 31,432,907 (-)NCBI
SpeTri2.0NW_0049366002,898,321 - 3,037,413 (-)NCBI
Sequence:
RefSeq Acc Id: XM_005333611   ⟹   XP_005333668
RefSeq Status:
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440721331,295,088 - 31,433,103 (-)NCBI
SpeTri2.0NW_0049366002,898,321 - 3,037,413 (-)NCBI
Sequence:
RefSeq Acc Id: XM_013362090   ⟹   XP_013217544
RefSeq Status:
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440721331,404,506 - 31,433,123 (-)NCBI
SpeTri2.0NW_0049366003,008,697 - 3,037,414 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021731835   ⟹   XP_021587510
RefSeq Status:
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
SpeTri2.0NW_0049366002,929,685 - 3,037,414 (-)NCBI
Sequence:
RefSeq Acc Id: XR_005727790
RefSeq Status:
Type: NON-CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440721331,324,617 - 31,433,114 (-)NCBI
Protein Sequences
Protein RefSeqs XP_005333667 (Get FASTA)   NCBI Sequence Viewer  
  XP_005333668 (Get FASTA)   NCBI Sequence Viewer  
  XP_013217544 (Get FASTA)   NCBI Sequence Viewer  
Reference Sequences
RefSeq Acc Id: XP_005333668   ⟸   XM_005333611
- Peptide Label: isoform X2
- UniProtKB: A0A287D9B6 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_005333667   ⟸   XM_005333610
- Peptide Label: isoform X1
- UniProtKB: I3MN15 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_013217544   ⟸   XM_013362090
- Peptide Label: isoform X3
- Sequence:
RefSeq Acc Id: XP_021587510   ⟸   XM_021731835
- Peptide Label: isoform X3
- Sequence:
Protein Domains
CBS   CNNM transmembrane


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSSTOG00000014497 ENTREZGENE
Ensembl Protein ENSSTOP00000012986 ENTREZGENE
  ENSSTOP00000030129 ENTREZGENE
NCBI Gene Cnnm2 ENTREZGENE
UniProt A0A287D9B6 ENTREZGENE
  I3MN15 ENTREZGENE