Dpep1 (dipeptidase 1) - Rat Genome Database

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Gene: Dpep1 (dipeptidase 1) Ictidomys tridecemlineatus
Analyze
Symbol: Dpep1
Name: dipeptidase 1
RGD ID: 12635454
Description: ENCODES a protein that exhibits GPI anchor binding (ortholog); identical protein binding (ortholog); INVOLVED IN cellular response to calcium ion (ortholog); cellular response to insulin stimulus (ortholog); cellular response to nitric oxide (ortholog); ASSOCIATED WITH autosomal recessive chronic granulomatous disease 4 (ortholog); Chemically-Induced Disorders (ortholog); Fanconi anemia (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); extracellular space (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: dipeptidase 1 (renal)
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: SpeTri2.0 - Squirrel SpeTri2.0 Assembly
Position:
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440934924,625,555 - 24,643,322 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936641379,083 - 391,918 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_004936641379,112 - 384,711 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
Dpep1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440934924,625,555 - 24,643,322 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936641379,083 - 391,918 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_004936641379,112 - 384,711 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
DPEP1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381689,613,308 - 89,641,540 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1689,613,308 - 89,638,456 (+)EnsemblGRCh38hg38GRCh38
GRCh371689,679,716 - 89,707,948 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361688,214,501 - 88,232,338 (+)NCBINCBI36Build 36hg18NCBI36
Build 341688,214,500 - 88,232,338NCBI
Celera1674,743,127 - 74,769,330 (+)NCBICelera
Cytogenetic Map16q24.3NCBI
HuRef1675,374,386 - 75,400,655 (+)NCBIHuRef
CHM1_11691,091,422 - 91,116,106 (+)NCBICHM1_1
T2T-CHM13v2.01695,694,848 - 95,725,329 (+)NCBIT2T-CHM13v2.0
Dpep1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm398123,913,069 - 123,928,551 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl8123,912,981 - 123,928,551 (+)EnsemblGRCm39 Ensembl
GRCm388123,186,235 - 123,201,812 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl8123,186,242 - 123,201,812 (+)EnsemblGRCm38mm10GRCm38
MGSCv378125,710,135 - 125,725,712 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv368126,072,332 - 126,087,314 (+)NCBIMGSCv36mm8
Celera8127,417,731 - 127,433,354 (+)NCBICelera
Cytogenetic Map8E1NCBI
cM Map872.08NCBI
Dpep1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81968,118,270 - 68,143,781 (+)NCBIGRCr8
mRatBN7.21951,209,831 - 51,237,004 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1951,219,660 - 51,235,257 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1958,014,788 - 58,029,351 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01958,694,560 - 58,709,533 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01960,913,384 - 60,927,951 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01955,973,447 - 55,998,830 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1955,982,740 - 55,998,208 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01966,678,990 - 66,706,989 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41953,503,467 - 53,518,440 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11953,508,370 - 53,523,966 (+)NCBI
Celera1950,455,220 - 50,470,193 (+)NCBICelera
Cytogenetic Map19q12NCBI
Dpep1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049555413,204,055 - 3,215,565 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049555413,204,421 - 3,215,514 (+)NCBIChiLan1.0ChiLan1.0
DPEP1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21899,399,032 - 99,426,756 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan116105,315,996 - 105,342,405 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01670,365,900 - 70,392,377 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11689,971,984 - 89,997,978 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1689,975,105 - 89,997,978 (+)Ensemblpanpan1.1panPan2
DPEP1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1563,909,034 - 63,923,309 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl563,909,042 - 63,923,492 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha563,921,890 - 63,936,207 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0564,136,884 - 64,151,198 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl564,136,892 - 64,151,287 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1564,156,932 - 64,171,234 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0563,994,537 - 64,008,843 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0564,401,112 - 64,415,426 (-)NCBIUU_Cfam_GSD_1.0
DPEP1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl6361,197 - 376,616 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.16361,187 - 385,757 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.26488,005 - 503,439 (-)NCBISscrofa10.2Sscrofa10.2susScr3
LOC103233484
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1574,963,509 - 74,987,469 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl574,977,290 - 74,987,546 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_023669841183 - 2,804 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Dpep1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_004624746310,248 - 315,654 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_004624746310,361 - 321,053 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression


Sequence


RefSeq Acc Id: ENSSTOT00000011942   ⟹   ENSSTOP00000010712
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
SpeTri2.0 EnsemblNW_004936641379,083 - 391,918 (-)Ensembl
RefSeq Acc Id: XM_005335414   ⟹   XP_005335471
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440934924,625,555 - 24,638,802 (-)NCBI
SpeTri2.0NW_004936641379,112 - 384,711 (-)NCBI
Sequence:
RefSeq Acc Id: XM_040279649   ⟹   XP_040135583
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440934924,625,709 - 24,643,322 (-)NCBI
RefSeq Acc Id: XM_040279650   ⟹   XP_040135584
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440934924,625,709 - 24,640,886 (-)NCBI
RefSeq Acc Id: XM_040279651   ⟹   XP_040135585
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440934924,625,709 - 24,643,125 (-)NCBI
RefSeq Acc Id: XM_040279652   ⟹   XP_040135586
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440934924,625,709 - 24,643,322 (-)NCBI
RefSeq Acc Id: XM_040279653   ⟹   XP_040135587
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440934924,625,709 - 24,643,148 (-)NCBI
RefSeq Acc Id: XM_040279654   ⟹   XP_040135588
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440934924,625,709 - 24,643,148 (-)NCBI
RefSeq Acc Id: XM_040279655   ⟹   XP_040135589
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440934924,625,709 - 24,640,886 (-)NCBI
RefSeq Acc Id: XM_040279656   ⟹   XP_040135590
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440934924,625,709 - 24,638,803 (-)NCBI
RefSeq Acc Id: XM_040279658   ⟹   XP_040135592
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440934924,625,709 - 24,632,027 (-)NCBI
RefSeq Acc Id: XP_005335471   ⟸   XM_005335414
- UniProtKB: I3MI93 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_040135583   ⟸   XM_040279649
- UniProtKB: I3MI93 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_040135586   ⟸   XM_040279652
- UniProtKB: I3MI93 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_040135587   ⟸   XM_040279653
- UniProtKB: I3MI93 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_040135588   ⟸   XM_040279654
- UniProtKB: I3MI93 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_040135585   ⟸   XM_040279651
- UniProtKB: I3MI93 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_040135584   ⟸   XM_040279650
- UniProtKB: I3MI93 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_040135589   ⟸   XM_040279655
- UniProtKB: I3MI93 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_040135590   ⟸   XM_040279656
- UniProtKB: I3MI93 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_040135592   ⟸   XM_040279658
- UniProtKB: I3MI93 (UniProtKB/TrEMBL)
RefSeq Acc Id: ENSSTOP00000010712   ⟸   ENSSTOT00000011942


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSSTOG00000011941 Ensembl, UniProtKB/TrEMBL
Ensembl Transcript ENSSTOT00000011942.3 UniProtKB/TrEMBL
Gene3D-CATH Metal-dependent hydrolases UniProtKB/TrEMBL
InterPro Dipep_AS UniProtKB/TrEMBL
  Metal_Hydrolase UniProtKB/TrEMBL
  Pept_M19 UniProtKB/TrEMBL
NCBI Gene Dpep1 ENTREZGENE
PANTHER PTHR10443 UniProtKB/TrEMBL
  PTHR10443:SF38 UniProtKB/TrEMBL
Pfam Peptidase_M19 UniProtKB/TrEMBL
PROSITE RENAL_DIPEPTIDASE_1 UniProtKB/TrEMBL
  RENAL_DIPEPTIDASE_2 UniProtKB/TrEMBL
Superfamily-SCOP SSF51556 UniProtKB/TrEMBL
UniProt I3MI93 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2017-08-08 Dpep1  dipeptidase 1    dipeptidase 1 (renal)  Symbol and/or name change 5135510 APPROVED