LOC101956358 (olfactory receptor 51E1) - Rat Genome Database

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Pathways
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Gene: LOC101956358 (olfactory receptor 51E1) Ictidomys tridecemlineatus
Analyze
Symbol: LOC101956358 (Ensembl: OR51E1)
Name: olfactory receptor 51E1
RGD ID: 12634281
Description: ENCODES a protein that exhibits G protein-coupled receptor activity (inferred); olfactory receptor activity (inferred); INVOLVED IN detection of chemical stimulus involved in sensory perception of smell (inferred); G protein-coupled receptor signaling pathway (inferred); sensory perception of smell (inferred); FOUND IN membrane (inferred); plasma membrane (inferred)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: OR51E1
Latest Assembly: SpeTri2.0 - Squirrel SpeTri2.0 Assembly
Position:
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494758,849,539 - 58,850,619 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936498449,166 - 450,119 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_004936498449,075 - 450,155 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:22301074  


Genomics


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts XM_005323118 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide JAESOR010000006 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSSTOT00000014155   ⟹   ENSSTOP00000012680
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
SpeTri2.0 EnsemblNW_004936498449,166 - 450,119 (-)Ensembl
RefSeq Acc Id: XM_005323118   ⟹   XP_005323175
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440494758,849,539 - 58,850,619 (-)NCBI
SpeTri2.0NW_004936498449,075 - 450,155 (-)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_005323175 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSSTOP00000012680.2
GenBank Protein KAG3285995 (Get FASTA)   NCBI Sequence Viewer  
  KAG3285996 (Get FASTA)   NCBI Sequence Viewer  
Reference Protein Sequences
RefSeq Acc Id: XP_005323175   ⟸   XM_005323118
- UniProtKB: I3MMD4 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSSTOP00000012680   ⟸   ENSSTOT00000014155
Protein Domains
G-protein coupled receptors family 1 profile


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSSTOG00000014162 Ensembl, UniProtKB/TrEMBL
Ensembl Transcript ENSSTOT00000014155.2 UniProtKB/TrEMBL
Gene3D-CATH Rhodopsin 7-helix transmembrane proteins UniProtKB/TrEMBL
InterPro GPCR_Rhodpsn UniProtKB/TrEMBL
  GPCR_Rhodpsn_7TM UniProtKB/TrEMBL
  Olfact_rcpt UniProtKB/TrEMBL
NCBI Gene LOC101956358 ENTREZGENE
PANTHER OLFACTORY RECEPTOR 51E1 UniProtKB/TrEMBL
  OLFACTORY RECEPTOR 56B1-RELATED UniProtKB/TrEMBL
Pfam 7tm_4 UniProtKB/TrEMBL
PRINTS GPCRRHODOPSN UniProtKB/TrEMBL
  OLFACTORYR UniProtKB/TrEMBL
PROSITE G_PROTEIN_RECEP_F1_1 UniProtKB/TrEMBL
  G_PROTEIN_RECEP_F1_2 UniProtKB/TrEMBL
Superfamily-SCOP Family A G protein-coupled receptor-like UniProtKB/TrEMBL
UniProt I3MMD4 ENTREZGENE, UniProtKB/TrEMBL