Glyatl3 (glycine-N-acyltransferase like 3)

Gene: Glyatl3 (glycine-N-acyltransferase like 3) Ictidomys tridecemlineatus

Analyze

Symbol:

Glyatl3

Name:

glycine-N-acyltransferase like 3

RGD ID:

12634192

Description:

ENCODES a protein that exhibits acyltransferase activity (inferred); glycine N-acyltransferase activity (inferred); N-acyltransferase activity (inferred); ASSOCIATED WITH genetic disease (ortholog); FOUND IN mitochondrion (inferred)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

glycine N-acyltransferase-like protein 3

RGD Orthologs

Alliance Genes

More Info

more info ...

Latest Assembly:

SpeTri2.0 - Squirrel SpeTri2.0 Assembly

Position:

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404946	52,776,950 - 52,788,712 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936476	11,172,032 - 11,183,099 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936476	11,172,032 - 11,183,099 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

genetic disease (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Cellular Component

mitochondrion (IEA)

Molecular Function

acyltransferase activity (IEA)

glycine N-acyltransferase activity (IEA)

N-acyltransferase activity (IEA)

References

Additional References at PubMed

PMID:22301074	PMID:30032202

Genomics

Comparative Map Data

Glyatl3
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404946	52,776,950 - 52,788,712 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936476	11,172,032 - 11,183,099 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936476	11,172,032 - 11,183,099 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

GLYATL3
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	6	49,499,923 - 49,528,078 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	6	49,499,923 - 49,528,078 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	6	49,467,636 - 49,495,791 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	6	49,467,671 - 49,495,777 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Celera	6	51,023,868 - 51,051,973 (+)	NCBI		Celera
Cytogenetic Map	6	p12.3	NCBI
HuRef	6	49,197,157 - 49,225,147 (+)	NCBI		HuRef
CHM1_1	6	49,470,698 - 49,498,820 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	6	49,342,084 - 49,370,250 (+)	NCBI		T2T-CHM13v2.0

Glyatl3
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	17	41,214,599 - 41,229,469 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	17	41,215,509 - 41,225,241 (-)	Ensembl		GRCm39 Ensembl
GRCm38	17	40,904,727 - 40,923,048 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	17	40,904,618 - 40,914,350 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	17	41,041,690 - 41,051,299 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	17	40,368,225 - 40,376,239 (-)	NCBI		MGSCv36	mm8
Celera	17	44,314,932 - 44,324,945 (-)	NCBI		Celera
Cytogenetic Map	17	B2	NCBI
cM Map	17	19.55	NCBI

Glyatl3
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	9	27,474,057 - 27,492,281 (+)	NCBI		GRCr8
mRatBN7.2	9	19,977,493 - 19,995,723 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	9	19,977,302 - 19,995,650 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	9	28,555,452 - 28,565,981 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	9	33,630,005 - 33,640,537 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	9	31,937,028 - 31,947,315 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	9	23,372,614 - 23,390,764 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	9	23,379,200 - 23,390,487 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	9	22,236,745 - 22,248,032 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	9	16,119,729 - 16,131,491 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
Celera	9	17,661,422 - 17,672,330 (+)	NCBI		Celera
Cytogenetic Map	9	q13	NCBI

Glyatl3
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955410	33,444,100 - 33,462,285 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955410	33,444,100 - 33,462,285 (-)	NCBI	ChiLan1.0	ChiLan1.0

GLYATL3
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	5	63,989,981 - 64,011,474 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	6	59,854,701 - 59,876,197 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	6	49,075,808 - 49,097,303 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	6	50,337,934 - 50,359,318 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	6	50,337,934 - 50,359,318 (+)	Ensembl	panpan1.1		panPan2

GLYATL3
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	12	17,359,085 - 17,375,833 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	12	17,362,736 - 17,375,694 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	12	17,259,077 - 17,275,637 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	12	17,855,371 - 17,871,923 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	12	17,858,986 - 17,870,755 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	12	17,375,110 - 17,391,850 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	12	17,480,383 - 17,497,143 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	12	17,610,009 - 17,626,571 (+)	NCBI		UU_Cfam_GSD_1.0

GLYATL3
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	7	43,639,946 - 43,659,566 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	7	43,641,443 - 43,659,754 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	7	50,130,074 - 50,144,643 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

GLYATL3
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	17	22,871,047 - 22,894,071 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	17	22,872,486 - 22,892,476 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666044	49,485,043 - 49,505,679 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Glyatl3
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624783	1,796,386 - 1,813,262 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624783	1,796,648 - 1,813,268 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Expression

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_013355731	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	JAESOR010000005	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSSTOT00000001428 ⟹ ENSSTOP00000001281

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
SpeTri2.0 Ensembl	NW_004936476	11,172,032 - 11,183,099 (-)	Ensembl

RefSeq Acc Id:

XM_013355731 ⟹ XP_013211185

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024404946	52,776,950 - 52,788,712 (+)	NCBI
SpeTri2.0	NW_004936476	11,172,032 - 11,183,099 (-)	NCBI

Sequence:

show sequence

ATGTTGGTGCTAAACTGTTCTACCAAATTACTGATGCTAGAGAAAATATTGAAGAATCACTTTC
CTGAATCACTCAAGGTTTATGGAGCAGTGATGAACATAAATCGTGGGAATCCCTTTCAAAAGGA
AGTGGTACTAGATTCATGGCCAGACTTCAAAGCTGTTATCACCCGAAGGCAGAGAGAGGCTGAG
ACAGATAACCTTGACCATTATACTAATGCCTATGCTGTGTTCTACAAGGATGTCAGGGCTTACC
AACAGCTATTGGAAGAACATGATGTCATTAACTGGAACCAAGTTTTTCAAATACAAGGGCTACA
GAGTGAGTTATATGATGCTTCCAAAGCTGTTGCCAATTCAAAGCAATTGGATATAAAGCTGACT
TCCTTCAAGGCTGTTCATTTTTCTCCTGTTTCATCTCTGCCAGATACCAGTTTCCTAACGGGGT
CTTCCCCGAGACTCACCTATCTGAGTGTTGCGGATGCTGATCTCCTCAACCGCACTTGGTCAAG
GGGTGGCAATGAGCAGTGTCTCCGGTACATTGCCAAACTCATCTCCTGCTTCCCCAGTGTGTGT
GTCCGTGATGACAAGGGAAACCCGGTATCCTGGTCTATCACAGACCAGTTTGCCACCATGTGCC
ACGGCTACACCCTGCCAGATCATCGCAGGAAAGGTTATAGCCGGCTGGTGGCCCTCACACTGGC
CAGGAAGCTGCAAAGCCGGGGATTCCCCTCTCAGGGAAATGTTCTGGATGACAACATGCCATCT
ATAAATCTTCTCAAGAGTGTCCATGCTGAGTTCTTGCCTTGTCGTTTTCACAGGCTTATTCTTA
CCCCCAAACCTTTCTCTGACCAAGCTCACCTTTAG

hide sequence

Protein Sequences


Protein RefSeqs	XP_013211185	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSSTOP00000001281.2
GenBank Protein	KAG3289599	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:

XP_013211185 ⟸ XM_013355731

- UniProtKB:

I3LYK4 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MLVLNCSTKLLMLEKILKNHFPESLKVYGAVMNINRGNPFQKEVVLDSWPDFKAVITRRQREAE
TDNLDHYTNAYAVFYKDVRAYQQLLEEHDVINWNQVFQIQGLQSELYDASKAVANSKQLDIKLT
SFKAVHFSPVSSLPDTSFLTGSSPRLTYLSVADADLLNRTWSRGGNEQCLRYIAKLISCFPSVC
VRDDKGNPVSWSITDQFATMCHGYTLPDHRRKGYSRLVALTLARKLQSRGFPSQGNVLDDNMPS
INLLKSVHAEFLPCRFHRLILTPKPFSDQAHL

hide sequence

RefSeq Acc Id:

ENSSTOP00000001281 ⟸ ENSSTOT00000001428

Protein Domains

Glycine N-acyltransferase C-terminal Glycine N-acyltransferase N-terminal

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSSTOG00000001428	Ensembl, UniProtKB/TrEMBL
Ensembl Transcript	ENSSTOT00000001428.2	UniProtKB/TrEMBL
Gene3D-CATH	3.40.630.30	UniProtKB/TrEMBL
InterPro	Acyl_CoA_acyltransferase	UniProtKB/TrEMBL
	Glycine_N-acyltransferase	UniProtKB/TrEMBL
	Glycine_N-acyltransferase_C	UniProtKB/TrEMBL
	Glycine_N-acyltransferase_N	UniProtKB/TrEMBL
NCBI Gene	Glyatl3	ENTREZGENE
PANTHER	GLYCINE N-ACYLTRANSFERASE-LIKE PROTEIN 3	UniProtKB/TrEMBL
	PTHR15298	UniProtKB/TrEMBL
Pfam	Gly_acyl_tr_C	UniProtKB/TrEMBL
	Gly_acyl_tr_N	UniProtKB/TrEMBL
Superfamily-SCOP	SSF55729	UniProtKB/TrEMBL
UniProt	I3LYK4	ENTREZGENE, UniProtKB/TrEMBL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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