Mpc1 (mitochondrial pyruvate carrier 1) - Rat Genome Database

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Gene: Mpc1 (mitochondrial pyruvate carrier 1) Ictidomys tridecemlineatus
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Symbol: Mpc1
Name: mitochondrial pyruvate carrier 1
RGD ID: 12632990
Description: ENCODES a protein that exhibits pyruvate transmembrane transporter activity (ortholog); INVOLVED IN cellular response to leukemia inhibitory factor (ortholog); mitochondrial acetyl-CoA biosynthetic process from pyruvate (ortholog); mitochondrial pyruvate transmembrane transport (ortholog); PARTICIPATES IN citric acid cycle pathway; fructose-1,6-bisphosphatase deficiency pathway; fumaric aciduria pathway; ASSOCIATED WITH Fraser syndrome 3 (ortholog); mitochondrial pyruvate carrier deficiency (ortholog); substance-related disorder (ortholog); FOUND IN mitochondrion (ortholog)
Type: protein-coding
RefSeq Status: MODEL
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: SpeTri2.0 - Squirrel SpeTri2.0 Assembly
Position:
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024404946148,927,328 - 148,929,837 (-)NCBI
SpeTri2.0NW_00493648916,179,321 - 16,181,991 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

Comparative Map Data
Mpc1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024404946148,927,328 - 148,929,837 (-)NCBI
SpeTri2.0NW_00493648916,179,321 - 16,181,991 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
MPC1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl6166,364,919 - 166,383,013 (-)EnsemblGRCh38hg38GRCh38
GRCh386166,364,919 - 166,382,940 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh376166,778,407 - 166,796,428 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 366166,698,397 - 166,716,476 (-)NCBINCBI36hg18NCBI36
Build 346166,748,820 - 166,766,897NCBI
Celera6167,517,772 - 167,535,855 (-)NCBI
Cytogenetic Map6q27NCBI
HuRef6164,249,365 - 164,267,463 (-)NCBIHuRef
CHM1_16167,042,136 - 167,060,235 (-)NCBICHM1_1
Mpc1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39178,502,590 - 8,516,499 (+)NCBIGRCm39mm39
GRCm39 Ensembl178,501,736 - 8,516,493 (+)Ensembl
GRCm38178,283,787 - 8,297,667 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl178,282,904 - 8,297,661 (+)EnsemblGRCm38mm10GRCm38
MGSCv37178,476,678 - 8,490,526 (+)NCBIGRCm37mm9NCBIm37
MGSCv36178,121,987 - 8,135,835 (+)NCBImm8
Celera12112,049,395 - 112,049,996 (-)NCBICelera
Cytogenetic Map17A1NCBI
cM Map174.92NCBI
Mpc1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.2152,437,745 - 52,449,369 (-)NCBImRatBN7.2
mRatBN7.2 Ensembl152,437,741 - 52,449,400 (-)Ensembl
Rnor_6.0153,026,608 - 53,038,229 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl153,026,608 - 53,038,229 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0154,275,046 - 54,286,667 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4147,077,723 - 47,089,344 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1147,080,667 - 47,092,289 (-)NCBI
Celera148,200,723 - 48,212,344 (-)NCBICelera
Cytogenetic Map1q12NCBI
Mpc1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495543915,516,090 - 15,531,116 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495543915,515,966 - 15,531,618 (+)NCBIChiLan1.0ChiLan1.0
MPC1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.16169,313,271 - 169,318,685 (-)NCBIpanpan1.1PanPan1.1panPan2
Mhudiblu_PPA_v06164,331,604 - 164,349,747 (-)NCBIMhudiblu_PPA_v0panPan3
MPC1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1154,379,195 - 54,395,697 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha155,167,961 - 55,184,449 (-)NCBI
ROS_Cfam_1.0154,557,931 - 54,574,673 (-)NCBI
UMICH_Zoey_3.1154,455,224 - 54,471,730 (-)NCBI
UNSW_CanFamBas_1.0154,304,263 - 54,320,827 (-)NCBI
UU_Cfam_GSD_1.0154,928,921 - 54,945,422 (-)NCBI
MPC1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.112,541,475 - 2,552,864 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.213,681,075 - 3,692,480 (+)NCBISscrofa10.2Sscrofa10.2susScr3
MPC1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11394,080,417 - 94,100,149 (-)NCBIChlSab1.1chlSab2
Vero_WHO_p1.0NW_02366604065,907,418 - 65,927,150 (-)NCBIVero_WHO_p1.0
Mpc1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_00462478512,876,942 - 12,892,417 (+)NCBIHetGla_female_1.0hetGla2


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts XM_005321436 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide JAESOR010000005 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: XM_005321436   ⟹   XP_005321493
RefSeq Status:
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_024404946148,927,328 - 148,929,837 (-)NCBI
SpeTri2.0NW_00493648916,179,321 - 16,181,991 (-)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_005321493 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein KAG3290561 (Get FASTA)   NCBI Sequence Viewer  
Reference Sequences
RefSeq Acc Id: XP_005321493   ⟸   XM_005321436
- Sequence:


Additional Information

Database Acc Id Source(s)
NCBI Gene Mpc1 ENTREZGENE