Apip (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
HiC_Itri_2 | NW_024404947 | 30,091,219 - 30,114,204 (+) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936533 | 3,216,187 - 3,238,776 (+) | Ensembl | SpeTri2.0 | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936533 | 3,216,020 - 3,238,999 (+) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
|
APIP (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCh38 | 11 | 34,882,295 - 34,916,379 (-) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 11 | 34,853,094 - 34,916,379 (-) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 11 | 34,903,842 - 34,937,926 (-) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 11 | 34,860,421 - 34,894,484 (-) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Celera | 11 | 35,051,185 - 35,085,276 (-) | NCBI | | Celera | | | Cytogenetic Map | 11 | p13 | NCBI | | | | | HuRef | 11 | 34,602,325 - 34,636,417 (-) | NCBI | | HuRef | | | CHM1_1 | 11 | 34,902,113 - 34,936,196 (-) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 11 | 35,020,271 - 35,054,314 (-) | NCBI | | T2T-CHM13v2.0 | | |
|
Apip (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCm39 | 2 | 102,904,020 - 102,922,994 (+) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 2 | 102,904,020 - 102,922,989 (+) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 2 | 103,073,675 - 103,092,649 (+) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 2 | 103,073,675 - 103,092,644 (+) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 2 | 102,913,832 - 102,932,806 (+) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 2 | 102,874,514 - 102,893,460 (+) | NCBI | | MGSCv36 | mm8 | | Celera | 2 | 104,317,769 - 104,336,727 (+) | NCBI | | Celera | | | Cytogenetic Map | 2 | E2 | NCBI | | | | | cM Map | 2 | 54.29 | NCBI | | | | |
|
Apip (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCr8 | 3 | 109,886,919 - 109,913,295 (+) | NCBI | | GRCr8 | | | mRatBN7.2 | 3 | 89,431,964 - 89,458,000 (+) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 3 | 89,432,037 - 89,458,340 (+) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 3 | 92,931,217 - 92,957,295 (+) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 3 | 101,530,251 - 101,556,331 (+) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 3 | 99,359,187 - 99,385,302 (+) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 3 | 92,969,128 - 92,998,104 (+) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 3 | 92,969,141 - 92,995,483 (+) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 3 | 99,612,110 - 99,640,878 (+) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 3 | 88,306,123 - 88,332,800 (+) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | Celera | 3 | 88,509,653 - 88,535,688 (+) | NCBI | | Celera | | | Cytogenetic Map | 3 | q32 | NCBI | | | | |
|
Apip (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
ChiLan1.0 Ensembl | NW_004955422 | 11,405,721 - 11,429,146 (+) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955422 | 11,405,721 - 11,426,700 (+) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
|
APIP (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
NHGRI_mPanPan1-v2 | 9 | 37,103,066 - 37,137,097 (-) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 11 | 37,107,771 - 37,141,802 (-) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 11 | 34,855,437 - 34,889,486 (-) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 11 | 34,730,671 - 34,764,732 (-) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 11 | 34,730,671 - 34,764,732 (-) | Ensembl | panpan1.1 | | panPan2 | |
|
APIP (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
CanFam3.1 | 18 | 33,012,049 - 33,033,453 (+) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 18 | 33,011,121 - 33,033,435 (+) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 18 | 32,617,866 - 32,639,261 (+) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 18 | 33,623,160 - 33,644,563 (+) | NCBI | | ROS_Cfam_1.0 | | | UMICH_Zoey_3.1 | 18 | 33,183,124 - 33,204,482 (+) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 18 | 32,774,401 - 32,795,973 (+) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 18 | 33,409,813 - 33,431,215 (+) | NCBI | | UU_Cfam_GSD_1.0 | | |
|
APIP (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
Sscrofa11.1 Ensembl | 2 | 26,095,038 - 26,115,464 (+) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 2 | 26,095,020 - 26,115,462 (+) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 2 | 28,461,921 - 28,482,434 (+) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
|
APIP (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
ChlSab1.1 | 1 | 30,344,658 - 30,374,741 (+) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 1 | 30,344,690 - 30,374,737 (+) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666038 | 127,458,535 - 127,492,516 (+) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
|
Apip (Heterocephalus glaber - naked mole-rat) |
|