Plk2 (polo like kinase 2) - Rat Genome Database

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Gene: Plk2 (polo like kinase 2) Ictidomys tridecemlineatus
Analyze
Symbol: Plk2
Name: polo like kinase 2
RGD ID: 12619034
Description: ENCODES a protein that exhibits ATPase binding (ortholog); clathrin heavy chain binding (ortholog); GTPase binding (ortholog); INVOLVED IN long-term synaptic depression (ortholog); long-term synaptic potentiation (ortholog); mitotic cell cycle (ortholog); ASSOCIATED WITH Animal Mammary Neoplasms (ortholog); carcinoma (ortholog); Drug-Related Side Effects and Adverse Reactions (ortholog); FOUND IN dendrite (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: serine/threonine-protein kinase PLK2
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: SpeTri2.0 - Squirrel SpeTri2.0 Assembly
Position:
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024407213200,743,971 - 200,750,098 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049364809,680,449 - 9,686,595 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049364809,680,461 - 9,686,593 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component
centriole  (IEA)
centrosome  (IEA)
chromatin  (IEA)
cytoplasm  (IEA)
dendrite  (ISO)
kinetochore  (IEA)
nucleus  (IEA)
spindle pole  (IEA)

References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
Plk2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024407213200,743,971 - 200,750,098 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049364809,680,449 - 9,686,595 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049364809,680,461 - 9,686,593 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
PLK2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38558,453,982 - 58,460,086 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl558,453,982 - 58,460,139 (-)EnsemblGRCh38hg38GRCh38
GRCh37557,749,809 - 57,755,913 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36557,785,566 - 57,791,670 (-)NCBINCBI36Build 36hg18NCBI36
Build 34557,785,569 - 57,791,844NCBI
Celera554,688,300 - 54,694,404 (-)NCBICelera
Cytogenetic Map5q11.2NCBI
HuRef554,706,921 - 54,713,078 (-)NCBIHuRef
CHM1_1557,749,420 - 57,755,577 (-)NCBICHM1_1
T2T-CHM13v2.0559,272,431 - 59,278,533 (-)NCBIT2T-CHM13v2.0
Plk2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm3913110,531,578 - 110,537,378 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl13110,531,580 - 110,537,378 (+)EnsemblGRCm39 Ensembl
GRCm3813110,395,044 - 110,400,844 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl13110,395,046 - 110,400,844 (+)EnsemblGRCm38mm10GRCm38
MGSCv3713111,185,252 - 111,191,052 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv3613111,515,940 - 111,521,722 (+)NCBIMGSCv36mm8
Celera13114,729,888 - 114,735,651 (+)NCBICelera
Cytogenetic Map13D2.1NCBI
cM Map1361.97NCBI
Plk2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8243,702,536 - 43,708,305 (+)NCBIGRCr8
mRatBN7.2241,969,176 - 41,974,945 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl241,969,176 - 41,974,947 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx249,090,164 - 49,095,930 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0247,148,897 - 47,154,663 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0242,001,899 - 42,007,665 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0241,911,143 - 41,916,901 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl241,911,131 - 41,916,901 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0260,970,300 - 60,976,058 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4241,800,745 - 41,806,503 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1241,721,113 - 41,726,872 (+)NCBI
Celera237,785,007 - 37,790,765 (+)NCBICelera
Cytogenetic Map2q14NCBI
Plk2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554469,671,090 - 9,677,188 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554469,671,090 - 9,676,956 (+)NCBIChiLan1.0ChiLan1.0
PLK2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2455,454,341 - 55,461,398 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1553,607,973 - 53,614,939 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0555,543,828 - 55,550,116 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1557,178,503 - 57,184,793 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl557,177,836 - 57,184,793 (+)Ensemblpanpan1.1panPan2
PLK2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1245,359,865 - 45,365,496 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl245,360,374 - 45,367,441 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha242,431,127 - 42,436,818 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0245,844,932 - 45,850,642 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl245,844,939 - 45,850,697 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1242,914,745 - 42,920,462 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0243,720,594 - 43,726,300 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0244,541,169 - 44,546,873 (-)NCBIUU_Cfam_GSD_1.0
PLK2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1637,299,119 - 37,305,114 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11637,299,116 - 37,305,114 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21640,067,358 - 40,073,357 (-)NCBISscrofa10.2Sscrofa10.2susScr3
PLK2
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1454,629,868 - 54,636,134 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl454,629,194 - 54,636,032 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_0236660493,546,484 - 3,552,760 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Plk2
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_004624759811,316 - 817,474 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_004624759811,320 - 817,401 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts XM_005319604 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide JAESOR010002273 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

RefSeq Acc Id: ENSSTOT00000000138   ⟹   ENSSTOP00000000123
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
SpeTri2.0 EnsemblNW_0049364809,680,449 - 9,686,595 (+)Ensembl
RefSeq Acc Id: XM_005319604   ⟹   XP_005319661
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_024407213200,743,971 - 200,750,098 (+)NCBI
SpeTri2.0NW_0049364809,680,461 - 9,686,593 (+)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_005319661 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSSTOP00000000123.2
GenBank Protein KAG3266654 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: XP_005319661   ⟸   XM_005319604
- UniProtKB: I3LW17 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSSTOP00000000123   ⟸   ENSSTOT00000000138
Protein Domains
POLO box   Protein kinase


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSSTOG00000000137 Ensembl, UniProtKB/TrEMBL
Ensembl Transcript ENSSTOT00000000138.3 UniProtKB/TrEMBL
Gene3D-CATH 3.30.1120.30 UniProtKB/TrEMBL
  Transferase(Phosphotransferase) domain 1 UniProtKB/TrEMBL
InterPro Kinase-like_dom_sf UniProtKB/TrEMBL
  PLK2_STKc UniProtKB/TrEMBL
  POLO_box_1 UniProtKB/TrEMBL
  POLO_box_2 UniProtKB/TrEMBL
  POLO_box_dom UniProtKB/TrEMBL
  POLO_box_dom_sf UniProtKB/TrEMBL
  Prot_kinase_dom UniProtKB/TrEMBL
  Protein_kinase_ATP_BS UniProtKB/TrEMBL
  Ser/Thr_kinase_AS UniProtKB/TrEMBL
NCBI Gene Plk2 ENTREZGENE
PANTHER SERINE/THREONINE-PROTEIN KINASE PLK UniProtKB/TrEMBL
  SERINE/THREONINE-PROTEIN KINASE PLK2 UniProtKB/TrEMBL
Pfam Pkinase UniProtKB/TrEMBL
  POLO_box UniProtKB/TrEMBL
PROSITE POLO_BOX UniProtKB/TrEMBL
  PROTEIN_KINASE_ATP UniProtKB/TrEMBL
  PROTEIN_KINASE_DOM UniProtKB/TrEMBL
  PROTEIN_KINASE_ST UniProtKB/TrEMBL
SMART S_TKc UniProtKB/TrEMBL
Superfamily-SCOP Polo-box domain UniProtKB/TrEMBL
  SSF56112 UniProtKB/TrEMBL
UniProt I3LW17 ENTREZGENE, UniProtKB/TrEMBL