Trim32 (tripartite motif containing 32)

Gene: Trim32 (tripartite motif containing 32) Ictidomys tridecemlineatus

Analyze

Symbol:

Trim32

Name:

tripartite motif containing 32

RGD ID:

12619020

Description:

ENCODES a protein that exhibits identical protein binding (inferred); metal ion binding (inferred); myosin binding (inferred); INVOLVED IN actin ubiquitination (ortholog); axon development (ortholog); muscle cell cellular homeostasis (ortholog); ASSOCIATED WITH autosomal recessive limb-girdle muscular dystrophy (ortholog); autosomal recessive limb-girdle muscular dystrophy type 2H (ortholog); Bardet-Biedl syndrome (ortholog); FOUND IN autophagosome (ortholog); centrosome (ortholog)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

E3 ubiquitin-protein ligase TRIM32; tripartite motif containing 32, transcript variant X1; tripartite motif containing 32, transcript variant X2; tripartite motif containing 32, transcript variant X3; tripartite motif containing 32, transcript variant X4; tripartite motif containing 32, transcript variant X5

RGD Orthologs

Alliance Genes

More Info

more info ...

Latest Assembly:

SpeTri2.0 - Squirrel SpeTri2.0 Assembly

Position:

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404947	185,838,158 - 185,861,448 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936487	5,606,693 - 5,619,856 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936487	5,606,690 - 5,619,856 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

autosomal recessive limb-girdle muscular dystrophy (ISO)

autosomal recessive limb-girdle muscular dystrophy type 2H (ISO)

Bardet-Biedl syndrome (ISO)

Bardet-Biedl syndrome 11 (ISO)

genetic disease (ISO)

limb-girdle muscular dystrophy (ISO)

muscular dystrophy (ISO)

myopathy (ISO)

schizophrenia (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

actin ubiquitination (IEA,ISO)

axon development (IEA,ISO)

fat cell differentiation (IEA)

free ubiquitin chain polymerization (IEA)

innate immune response (IEA)

muscle cell cellular homeostasis (IEA,ISO)

negative regulation of cilium assembly (IEA)

negative regulation of fibroblast proliferation (IEA)

negative regulation of intrinsic apoptotic signaling pathway in response to DNA damage (IEA)

negative regulation of toll-like receptor 4 signaling pathway (IEA)

negative regulation of viral transcription (IEA)

positive regulation of autophagosome assembly (ISO)

positive regulation of autophagy (IEA)

positive regulation of canonical NF-kappaB signal transduction (IEA)

positive regulation of cell cycle (IEA)

positive regulation of cell growth (IEA)

positive regulation of cell migration (IEA)

positive regulation of cell motility (IEA)

positive regulation of chemokine (C-C motif) ligand 20 production (IEA,ISO)

positive regulation of DNA-templated transcription (IEA)

positive regulation of interleukin-17-mediated signaling pathway (IEA,ISO)

positive regulation of neurogenesis (IEA)

positive regulation of neuron differentiation (IEA)

positive regulation of protein catabolic process (IEA,ISO)

positive regulation of proteolysis (IEA)

positive regulation of striated muscle cell differentiation (IEA,ISO)

positive regulation of tumor necrosis factor-mediated signaling pathway (IEA,ISO)

protein K48-linked ubiquitination (IEA)

protein K63-linked ubiquitination (ISO)

protein polyubiquitination (IEA,ISO)

protein ubiquitination (IEA,ISO)

response to oxidative stress (ISO)

response to starvation (ISO)

response to tumor necrosis factor (IEA)

response to UV (IEA)

suppression of viral release by host (IEA)

tissue homeostasis (IEA,ISO)

ubiquitin-dependent protein catabolic process (IEA)

Cellular Component

autophagosome (ISO)

centrosome (IEA,ISO)

cytoplasm (IEA)

nucleus (IEA)

striated muscle myosin thick filament (IEA)

Molecular Function

identical protein binding (IEA)

metal ion binding (IEA)

myosin binding (IEA)

obsolete protein self-association (IEA)

protein binding (ISO)

protein-macromolecule adaptor activity (IEA)

RNA binding (IEA)

transcription coactivator activity (IEA)

transferase activity (IEA)

translation initiation factor binding (IEA)

ubiquitin binding (IEA)

ubiquitin protein ligase activity (IEA)

ubiquitin-protein transferase activity (IEA)

zinc ion binding (IEA)

References

Additional References at PubMed

PMID:22301074

Genomics

Comparative Map Data

Trim32
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404947	185,838,158 - 185,861,448 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936487	5,606,693 - 5,619,856 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936487	5,606,690 - 5,619,856 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

TRIM32
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	9	116,687,305 - 116,701,299 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	9	116,687,305 - 116,701,300 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	9	119,449,584 - 119,463,578 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	9	118,489,402 - 118,503,400 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	9	116,529,162 - 116,542,582	NCBI
Celera	9	90,097,223 - 90,111,221 (+)	NCBI		Celera
Cytogenetic Map	9	q33.1	NCBI
HuRef	9	89,054,928 - 89,068,929 (+)	NCBI		HuRef
CHM1_1	9	119,596,015 - 119,610,013 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	9	128,880,322 - 128,894,320 (+)	NCBI		T2T-CHM13v2.0

Trim32
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	4	65,523,223 - 65,534,477 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	4	65,523,223 - 65,534,475 (+)	Ensembl		GRCm39 Ensembl
GRCm38	4	65,604,986 - 65,616,240 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	4	65,604,986 - 65,616,238 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	4	65,266,020 - 65,277,274 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	4	65,091,379 - 65,102,599 (+)	NCBI		MGSCv36	mm8
Celera	4	64,238,387 - 64,249,387 (+)	NCBI		Celera
Cytogenetic Map	4	C1	NCBI
cM Map	4	34.43	NCBI

Trim32
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	5	84,020,604 - 84,031,483 (+)	NCBI		GRCr8
mRatBN7.2	5	79,005,139 - 79,016,615 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	5	78,999,389 - 79,022,018 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	5	81,389,235 - 81,400,062 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	5	83,206,527 - 83,217,355 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	5	83,182,098 - 83,192,925 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	5	81,431,554 - 81,449,023 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	5	81,431,600 - 81,442,451 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	5	85,530,347 - 85,541,240 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	5	82,380,439 - 82,391,290 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	5	82,385,551 - 82,396,402 (+)	NCBI
Celera	5	77,919,712 - 77,930,564 (+)	NCBI		Celera
Cytogenetic Map	5	q24	NCBI

Trim32
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955419	11,151,751 - 11,168,041 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955419	11,151,751 - 11,168,046 (-)	NCBI	ChiLan1.0	ChiLan1.0

TRIM32
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	11	22,644,786 - 22,658,273 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	9	22,647,147 - 22,660,624 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	9	87,819,723 - 87,838,684 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	9	116,173,546 - 116,187,300 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	9	116,183,746 - 116,185,707 (+)	Ensembl	panpan1.1		panPan2

TRIM32
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	11	70,453,130 - 70,465,030 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	11	70,462,007 - 70,463,974 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	11	68,861,539 - 68,873,667 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	11	71,578,469 - 71,590,603 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	11	71,578,495 - 71,590,597 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	11	70,098,438 - 70,110,545 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	11	70,132,364 - 70,144,497 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	11	70,863,600 - 70,875,730 (+)	NCBI		UU_Cfam_GSD_1.0

TRIM32
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	1	257,054,228 - 257,066,909 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	1	257,051,421 - 257,066,911 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	1	288,450,251 - 288,461,926 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

TRIM32
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	12	22,893,689 - 22,906,913 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	12	22,894,886 - 22,896,847 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666035	19,970,768 - 19,983,855 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Trim32
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624760	18,585,279 - 18,599,659 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624760	18,577,764 - 18,600,869 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Expression

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_005320886	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_005320887	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_013356747	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_021723470	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_021723471	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	JAESOR010000006	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSSTOT00000020197 ⟹ ENSSTOP00000016129

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
SpeTri2.0 Ensembl	NW_004936487	5,616,580 - 5,618,793 (+)	Ensembl

RefSeq Acc Id:

ENSSTOT00000041197 ⟹ ENSSTOP00000025507

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
SpeTri2.0 Ensembl	NW_004936487	5,606,693 - 5,619,856 (+)	Ensembl

RefSeq Acc Id:

XM_005320886 ⟹ XP_005320943

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024404947	185,838,158 - 185,861,448 (+)	NCBI
SpeTri2.0	NW_004936487	5,606,692 - 5,619,856 (+)	NCBI

Sequence:

show sequence

CGGCGGGCGGGTGGGCTGGCGGTGGTGGACGCGTTGGAGCCGCGGGCGGTCAGCAGGAGTCCGA
CTCTCTGCGGCATGAATGCTAAGCTGTTCAGTTCTGGGCTGTGCTAGCAGGATCCTTCAAAGAA
GAGCAATGGCTTCAGCAGCAGCTTCTCACCTGAACCTGGATGCCCTCCGTGAAGTGCTAGAATG
CCCTATCTGTATGGAGTCCTTCACAGAAGAGCAGCTACGGCCCAAGCTCTTGCACTGTGGCCAT
ACCATCTGCCGCCAGTGCTTGGAAAAGTTACTAGCTAGTAGCATCAATGGGGTTCGCTGTCCCT
TTTGCAGCAAGATTACCCGCATAACCAGCCTGACTCAGCTCACAGACAACCTGACAGTGCTGAA
GATCATTGACACAGCTGGGCTCAGCGAGGCTGTGGGGCTGCTCATGTGCCGGTCCTGTGGGCGG
CGGCTGCCCAGGCAATTCTGTAGGAGCTGCAGTTTGGTGTTGTGTGAGCCCTGCCGGGAGGCAG
ACCACCAGCCTCCCAGCCACTGTACACTCCCTGTCAAAGAGGCAGCTGAGGAACGGCGGCGGGA
CTTTGGAGAAAAGTTGACACGTCTGCGGGAGCTTATGGGGGAGCTGCAGCGGCGGAAGGTAGCT
TTGGAAGGTGTCTCCAAAGACCTTCAGGCAAGGTATAAAGCAGTCCTCCAGGAGTATGGGCATG
AGGAACGCAGGGTCCAGGAGGAGTTGGCTCGCTCTCGGAAGTTCTTCACAGGCTCTTTGGCTGA
AGTTGAGAAGTGTAATAGTCAAGTGGTAGAGGAGCAGAGTTACCTGCTTAACATTGCAGAGGTG
CAGGCTGTGTCTCGCTGTGACTATTTTCTGGCCAAGATCAAGCAGGCTGACGTAGCCCTACTGG
AGGAGACAGCTGATGAGGAGGAGCCAGAGCTCACTGCCAGCTTGCCCCGGGAGCTCACTCTGCA
AGATGTGGAGCTCCTTAAGGTAGGTCATGTTGGCCCCCTCCAAATTGGGCAAGCTGTTAAGAAG
CCCCGGACAGTTAACATGGAAGATTCCTGGGCCATGGAGGCTGCAGCCTCTGCTGCCTCTCCCT
CTGTTACATTTAGAGAGATGGACATGAGCCCCGAGGAAGTGGTTGCCAGCCCCAGAGCCTCGCC
TGCTAAACAGCGGAGTTCTGAGGCAGCCGCCAGTATCCAGCAGTGCCTCTTTCTCAAGAAGATG
GGAGCCAAAGGCAGCACTCCAGGCATGTTCAATCTTCCTGTCAGTCTCTACGTGACCAGTCAAG
GTGAGGTGCTGGTTGCTGACCGTGGCAACTACCGTATACAAGTCTTTACTCGCAAAGGTTTTTT
GAAAGAGATACGCCGCAGCCCCAGTGGCATTGATAGCTTCGTGCTAAGCTTCCTTGGGGCTGAT
TTGCCCAATCTTACTCCTCTCTCTGTGGCCATGAACTGCCATGGTCTCATTGGTGTGACTGACA
GCTATGACAACTCCCTCAAGGTATATACCTTGGATGGCCACTGCGTGGCCTGTCACAGGAGCCA
GCTGAGTAAACCATGGGGCATCACAGCCTTGCCATCTGGCCAGTTCGTGGTAACTGATGTGGAA
GGTGGAAAACTCTGGTGTTTTACTGTTGACCGAGGAGCAGGAGTGGTCAAATACAGCTGTCTCT
GCAGTGCTGTGCGACCCAAGTTTGTCACCTGTGATGCTGAAGGCACCGTCTACTTCACCCAGGG
CTTGGGCCTCAATCTGGAAAATAGGCAGAATGAGCACCACTTAGAGGGTGGTTTCTCCATCGGT
TCAGTGGGTCCTGATGGGCAGCTGGGTCGCCAGATTAGCCATTTCTTCTCAGAGAATGAGGATT
TCCGCTGCATTGCTGGCATGTGTGTGGATGCCCGTGGTGACCTCATCGTGGCTGATAGTAGTCG
CAAGGAAATTCTCCATTTTCCTAAGGGTGGGGGCTATAGTGTCCTTATTCGAGAAGGGCTCACC
TGTCCAGTGGGCATTGCCCTCACTCCTAAGGGACAGCTATTGGTCTTGGACTGTTGGGATCATT
GCATCAAGATCTACAGCTACCATCTAAGAAGATATTCTACCCCTTAGAGGATGAGAAATACCAG
TCTTCTGCTCCCAGCCAATTTTCCTTCCCTTAGTCCTTCCTTGGTTGTTGGCAGTATTATAGAG
TAGACTTGGCCTATGTACTGATTCCAGCTGGGTTGTTCTAGCATTTTAGAAGTTCTGTTTTTTA
GTGTTTGTTATTCCCCTCTCCACACCATATCCTATCCCCTACCTAAATTTAGAGCTTTAACAGA
TGCATTTCCCCAAATAGAACACATGATGGTGTTAGCTGATGTTTGATTAGAAACTAGGCACTTC
TAAGGCTTCAGTACAGAGCCACTTTTAGGCTTTTGCCCCTGTGTTTGAAATTTGCCCCCCTGCT
TAAATCCTTGTTGATTTCTTTGGGCTTTGATGTCATTCCGTGGTTCATTGTTTCCTTCCTATTA
TAATGTGCTTCATCTATGATACTTTCTCTTCAACTCTGGTTGCATTCTGGGTGCATGCTCCAAT
TGGATCTGCTTCACATTTCAGTGACATTTCAGACATCGCATCCCTGTAGCATGATGTTCCAGGT
TTGATCACCTTCACCAGTGCGAAAGCACATTCATTAAGTGCCACCAAGAGAGAGAGAACACAGT
CTCTTAGGGGAAGCAGTACTCTTGGCTAAGGAATTTGTGTCATCTTAGGTTGGTCTCCATTGCA
GATGTGCCAGAGAATGGACTGACTCTAGTTGGTTGGTGTTGAAGACTTCAGCCTGAAAATTGCT
TGCCTTTTAAAGGATTGGAATTACACCACAGCATAGGAAGATAGGAATAAGCAAAGAGAAATGC
TTGTGTAGTCTGCAAACTTAATAGCCTTTGGGGCTTTCTGTTTTTTGGGTTTTTTTTTCCTCTT
TCCACTGAACTGTGCTGAGTCGTATGAGAAACTGTACAACACAGGCCAGGGCCAATAAAGCAGG
GAGGTGGACACATCCATTTTCATTACTAAAACAAACATCAAAACTGTTGGATAGTTACTCTGTA
TTTTTCTCCAGTGAGTGTATATTGTTTGGCTTCAGAATTTATTTCCATTCTTGTATCAGGCATT
AAATAATTGATAACTTTCTTCA

hide sequence

RefSeq Acc Id:

XM_005320887 ⟹ XP_005320944

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024404947	185,838,160 - 185,861,448 (+)	NCBI
SpeTri2.0	NW_004936487	5,606,690 - 5,619,856 (+)	NCBI

Sequence:

show sequence

GGCGGCGGGCGGGTGGGCTGGCGGTGGTGGACGCGTTGGAGCCGCGGGCGGTCAGGAGTCCGAC
TCTCTGCGGCATGAATGCTAAGCTGTTCAGTTCTGGGCTGTGCTAGCAGGATCCTTCAAAGAAG
AGCAATGGCTTCAGCAGCAGCTTCTCACCTGAACCTGGATGCCCTCCGTGAAGTGCTAGAATGC
CCTATCTGTATGGAGTCCTTCACAGAAGAGCAGCTACGGCCCAAGCTCTTGCACTGTGGCCATA
CCATCTGCCGCCAGTGCTTGGAAAAGTTACTAGCTAGTAGCATCAATGGGGTTCGCTGTCCCTT
TTGCAGCAAGATTACCCGCATAACCAGCCTGACTCAGCTCACAGACAACCTGACAGTGCTGAAG
ATCATTGACACAGCTGGGCTCAGCGAGGCTGTGGGGCTGCTCATGTGCCGGTCCTGTGGGCGGC
GGCTGCCCAGGCAATTCTGTAGGAGCTGCAGTTTGGTGTTGTGTGAGCCCTGCCGGGAGGCAGA
CCACCAGCCTCCCAGCCACTGTACACTCCCTGTCAAAGAGGCAGCTGAGGAACGGCGGCGGGAC
TTTGGAGAAAAGTTGACACGTCTGCGGGAGCTTATGGGGGAGCTGCAGCGGCGGAAGGTAGCTT
TGGAAGGTGTCTCCAAAGACCTTCAGGCAAGGTATAAAGCAGTCCTCCAGGAGTATGGGCATGA
GGAACGCAGGGTCCAGGAGGAGTTGGCTCGCTCTCGGAAGTTCTTCACAGGCTCTTTGGCTGAA
GTTGAGAAGTGTAATAGTCAAGTGGTAGAGGAGCAGAGTTACCTGCTTAACATTGCAGAGGTGC
AGGCTGTGTCTCGCTGTGACTATTTTCTGGCCAAGATCAAGCAGGCTGACGTAGCCCTACTGGA
GGAGACAGCTGATGAGGAGGAGCCAGAGCTCACTGCCAGCTTGCCCCGGGAGCTCACTCTGCAA
GATGTGGAGCTCCTTAAGGTAGGTCATGTTGGCCCCCTCCAAATTGGGCAAGCTGTTAAGAAGC
CCCGGACAGTTAACATGGAAGATTCCTGGGCCATGGAGGCTGCAGCCTCTGCTGCCTCTCCCTC
TGTTACATTTAGAGAGATGGACATGAGCCCCGAGGAAGTGGTTGCCAGCCCCAGAGCCTCGCCT
GCTAAACAGCGGAGTTCTGAGGCAGCCGCCAGTATCCAGCAGTGCCTCTTTCTCAAGAAGATGG
GAGCCAAAGGCAGCACTCCAGGCATGTTCAATCTTCCTGTCAGTCTCTACGTGACCAGTCAAGG
TGAGGTGCTGGTTGCTGACCGTGGCAACTACCGTATACAAGTCTTTACTCGCAAAGGTTTTTTG
AAAGAGATACGCCGCAGCCCCAGTGGCATTGATAGCTTCGTGCTAAGCTTCCTTGGGGCTGATT
TGCCCAATCTTACTCCTCTCTCTGTGGCCATGAACTGCCATGGTCTCATTGGTGTGACTGACAG
CTATGACAACTCCCTCAAGGTATATACCTTGGATGGCCACTGCGTGGCCTGTCACAGGAGCCAG
CTGAGTAAACCATGGGGCATCACAGCCTTGCCATCTGGCCAGTTCGTGGTAACTGATGTGGAAG
GTGGAAAACTCTGGTGTTTTACTGTTGACCGAGGAGCAGGAGTGGTCAAATACAGCTGTCTCTG
CAGTGCTGTGCGACCCAAGTTTGTCACCTGTGATGCTGAAGGCACCGTCTACTTCACCCAGGGC
TTGGGCCTCAATCTGGAAAATAGGCAGAATGAGCACCACTTAGAGGGTGGTTTCTCCATCGGTT
CAGTGGGTCCTGATGGGCAGCTGGGTCGCCAGATTAGCCATTTCTTCTCAGAGAATGAGGATTT
CCGCTGCATTGCTGGCATGTGTGTGGATGCCCGTGGTGACCTCATCGTGGCTGATAGTAGTCGC
AAGGAAATTCTCCATTTTCCTAAGGGTGGGGGCTATAGTGTCCTTATTCGAGAAGGGCTCACCT
GTCCAGTGGGCATTGCCCTCACTCCTAAGGGACAGCTATTGGTCTTGGACTGTTGGGATCATTG
CATCAAGATCTACAGCTACCATCTAAGAAGATATTCTACCCCTTAGAGGATGAGAAATACCAGT
CTTCTGCTCCCAGCCAATTTTCCTTCCCTTAGTCCTTCCTTGGTTGTTGGCAGTATTATAGAGT
AGACTTGGCCTATGTACTGATTCCAGCTGGGTTGTTCTAGCATTTTAGAAGTTCTGTTTTTTAG
TGTTTGTTATTCCCCTCTCCACACCATATCCTATCCCCTACCTAAATTTAGAGCTTTAACAGAT
GCATTTCCCCAAATAGAACACATGATGGTGTTAGCTGATGTTTGATTAGAAACTAGGCACTTCT
AAGGCTTCAGTACAGAGCCACTTTTAGGCTTTTGCCCCTGTGTTTGAAATTTGCCCCCCTGCTT
AAATCCTTGTTGATTTCTTTGGGCTTTGATGTCATTCCGTGGTTCATTGTTTCCTTCCTATTAT
AATGTGCTTCATCTATGATACTTTCTCTTCAACTCTGGTTGCATTCTGGGTGCATGCTCCAATT
GGATCTGCTTCACATTTCAGTGACATTTCAGACATCGCATCCCTGTAGCATGATGTTCCAGGTT
TGATCACCTTCACCAGTGCGAAAGCACATTCATTAAGTGCCACCAAGAGAGAGAGAACACAGTC
TCTTAGGGGAAGCAGTACTCTTGGCTAAGGAATTTGTGTCATCTTAGGTTGGTCTCCATTGCAG
ATGTGCCAGAGAATGGACTGACTCTAGTTGGTTGGTGTTGAAGACTTCAGCCTGAAAATTGCTT
GCCTTTTAAAGGATTGGAATTACACCACAGCATAGGAAGATAGGAATAAGCAAAGAGAAATGCT
TGTGTAGTCTGCAAACTTAATAGCCTTTGGGGCTTTCTGTTTTTTGGGTTTTTTTTTCCTCTTT
CCACTGAACTGTGCTGAGTCGTATGAGAAACTGTACAACACAGGCCAGGGCCAATAAAGCAGGG
AGGTGGACACATCCATTTTCATTACTAAAACAAACATCAAAACTGTTGGATAGTTACTCTGTAT
TTTTCTCCAGTGAGTGTATATTGTTTGGCTTCAGAATTTATTTCCATTCTTGTATCAGGCATTA
AATAATTGATAACTTTCTTCA

hide sequence

RefSeq Acc Id:

XM_013356747 ⟹ XP_013212201

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024404947	185,838,384 - 185,861,448 (+)	NCBI
SpeTri2.0	NW_004936487	5,606,929 - 5,619,856 (+)	NCBI

Sequence:

show sequence

GAGATGCAGCTGGGGGAGGGGAGCGAGTGGTTCTGCGAAGATTCGCAGTCGCAGCGTCTCGGTC
TCTGGAGGTATGAGCAGGAGTCCGACTCTCTGCGGCATGAATGCTAAGCTGTTCAGTTCTGGGC
TGTGCTAGCAGGATCCTTCAAAGAAGAGCAATGGCTTCAGCAGCAGCTTCTCACCTGAACCTGG
ATGCCCTCCGTGAAGTGCTAGAATGCCCTATCTGTATGGAGTCCTTCACAGAAGAGCAGCTACG
GCCCAAGCTCTTGCACTGTGGCCATACCATCTGCCGCCAGTGCTTGGAAAAGTTACTAGCTAGT
AGCATCAATGGGGTTCGCTGTCCCTTTTGCAGCAAGATTACCCGCATAACCAGCCTGACTCAGC
TCACAGACAACCTGACAGTGCTGAAGATCATTGACACAGCTGGGCTCAGCGAGGCTGTGGGGCT
GCTCATGTGCCGGTCCTGTGGGCGGCGGCTGCCCAGGCAATTCTGTAGGAGCTGCAGTTTGGTG
TTGTGTGAGCCCTGCCGGGAGGCAGACCACCAGCCTCCCAGCCACTGTACACTCCCTGTCAAAG
AGGCAGCTGAGGAACGGCGGCGGGACTTTGGAGAAAAGTTGACACGTCTGCGGGAGCTTATGGG
GGAGCTGCAGCGGCGGAAGGTAGCTTTGGAAGGTGTCTCCAAAGACCTTCAGGCAAGGTATAAA
GCAGTCCTCCAGGAGTATGGGCATGAGGAACGCAGGGTCCAGGAGGAGTTGGCTCGCTCTCGGA
AGTTCTTCACAGGCTCTTTGGCTGAAGTTGAGAAGTGTAATAGTCAAGTGGTAGAGGAGCAGAG
TTACCTGCTTAACATTGCAGAGGTGCAGGCTGTGTCTCGCTGTGACTATTTTCTGGCCAAGATC
AAGCAGGCTGACGTAGCCCTACTGGAGGAGACAGCTGATGAGGAGGAGCCAGAGCTCACTGCCA
GCTTGCCCCGGGAGCTCACTCTGCAAGATGTGGAGCTCCTTAAGGTAGGTCATGTTGGCCCCCT
CCAAATTGGGCAAGCTGTTAAGAAGCCCCGGACAGTTAACATGGAAGATTCCTGGGCCATGGAG
GCTGCAGCCTCTGCTGCCTCTCCCTCTGTTACATTTAGAGAGATGGACATGAGCCCCGAGGAAG
TGGTTGCCAGCCCCAGAGCCTCGCCTGCTAAACAGCGGAGTTCTGAGGCAGCCGCCAGTATCCA
GCAGTGCCTCTTTCTCAAGAAGATGGGAGCCAAAGGCAGCACTCCAGGCATGTTCAATCTTCCT
GTCAGTCTCTACGTGACCAGTCAAGGTGAGGTGCTGGTTGCTGACCGTGGCAACTACCGTATAC
AAGTCTTTACTCGCAAAGGTTTTTTGAAAGAGATACGCCGCAGCCCCAGTGGCATTGATAGCTT
CGTGCTAAGCTTCCTTGGGGCTGATTTGCCCAATCTTACTCCTCTCTCTGTGGCCATGAACTGC
CATGGTCTCATTGGTGTGACTGACAGCTATGACAACTCCCTCAAGGTATATACCTTGGATGGCC
ACTGCGTGGCCTGTCACAGGAGCCAGCTGAGTAAACCATGGGGCATCACAGCCTTGCCATCTGG
CCAGTTCGTGGTAACTGATGTGGAAGGTGGAAAACTCTGGTGTTTTACTGTTGACCGAGGAGCA
GGAGTGGTCAAATACAGCTGTCTCTGCAGTGCTGTGCGACCCAAGTTTGTCACCTGTGATGCTG
AAGGCACCGTCTACTTCACCCAGGGCTTGGGCCTCAATCTGGAAAATAGGCAGAATGAGCACCA
CTTAGAGGGTGGTTTCTCCATCGGTTCAGTGGGTCCTGATGGGCAGCTGGGTCGCCAGATTAGC
CATTTCTTCTCAGAGAATGAGGATTTCCGCTGCATTGCTGGCATGTGTGTGGATGCCCGTGGTG
ACCTCATCGTGGCTGATAGTAGTCGCAAGGAAATTCTCCATTTTCCTAAGGGTGGGGGCTATAG
TGTCCTTATTCGAGAAGGGCTCACCTGTCCAGTGGGCATTGCCCTCACTCCTAAGGGACAGCTA
TTGGTCTTGGACTGTTGGGATCATTGCATCAAGATCTACAGCTACCATCTAAGAAGATATTCTA
CCCCTTAGAGGATGAGAAATACCAGTCTTCTGCTCCCAGCCAATTTTCCTTCCCTTAGTCCTTC
CTTGGTTGTTGGCAGTATTATAGAGTAGACTTGGCCTATGTACTGATTCCAGCTGGGTTGTTCT
AGCATTTTAGAAGTTCTGTTTTTTAGTGTTTGTTATTCCCCTCTCCACACCATATCCTATCCCC
TACCTAAATTTAGAGCTTTAACAGATGCATTTCCCCAAATAGAACACATGATGGTGTTAGCTGA
TGTTTGATTAGAAACTAGGCACTTCTAAGGCTTCAGTACAGAGCCACTTTTAGGCTTTTGCCCC
TGTGTTTGAAATTTGCCCCCCTGCTTAAATCCTTGTTGATTTCTTTGGGCTTTGATGTCATTCC
GTGGTTCATTGTTTCCTTCCTATTATAATGTGCTTCATCTATGATACTTTCTCTTCAACTCTGG
TTGCATTCTGGGTGCATGCTCCAATTGGATCTGCTTCACATTTCAGTGACATTTCAGACATCGC
ATCCCTGTAGCATGATGTTCCAGGTTTGATCACCTTCACCAGTGCGAAAGCACATTCATTAAGT
GCCACCAAGAGAGAGAGAACACAGTCTCTTAGGGGAAGCAGTACTCTTGGCTAAGGAATTTGTG
TCATCTTAGGTTGGTCTCCATTGCAGATGTGCCAGAGAATGGACTGACTCTAGTTGGTTGGTGT
TGAAGACTTCAGCCTGAAAATTGCTTGCCTTTTAAAGGATTGGAATTACACCACAGCATAGGAA
GATAGGAATAAGCAAAGAGAAATGCTTGTGTAGTCTGCAAACTTAATAGCCTTTGGGGCTTTCT
GTTTTTTGGGTTTTTTTTTCCTCTTTCCACTGAACTGTGCTGAGTCGTATGAGAAACTGTACAA
CACAGGCCAGGGCCAATAAAGCAGGGAGGTGGACACATCCATTTTCATTACTAAAACAAACATC
AAAACTGTTGGATAGTTACTCTGTATTTTTCTCCAGTGAGTGTATATTGTTTGGCTTCAGAATT
TATTTCCATTCTTGTATCAGGCATTAAATAATTGATAACTTTCTTCA

hide sequence

RefSeq Acc Id:

XM_021723470 ⟹ XP_021579145

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024404947	185,838,410 - 185,861,448 (+)	NCBI
SpeTri2.0	NW_004936487	5,606,939 - 5,619,856 (+)	NCBI

Sequence:

show sequence

TGGGGGAGGGGAGCGAGTGGTTCTGCGAAGATTCGCAGTCGCAGCGTCTCGGTCTCTGGAGGTA
TGAGGAGTCCGACTCTCTGCGGCATGAATGCTAAGCTGTTCAGTTCTGGGCTGTGCTAGCAGGA
TCCTTCAAAGAAGAGCAATGGCTTCAGCAGCAGCTTCTCACCTGAACCTGGATGCCCTCCGTGA
AGTGCTAGAATGCCCTATCTGTATGGAGTCCTTCACAGAAGAGCAGCTACGGCCCAAGCTCTTG
CACTGTGGCCATACCATCTGCCGCCAGTGCTTGGAAAAGTTACTAGCTAGTAGCATCAATGGGG
TTCGCTGTCCCTTTTGCAGCAAGATTACCCGCATAACCAGCCTGACTCAGCTCACAGACAACCT
GACAGTGCTGAAGATCATTGACACAGCTGGGCTCAGCGAGGCTGTGGGGCTGCTCATGTGCCGG
TCCTGTGGGCGGCGGCTGCCCAGGCAATTCTGTAGGAGCTGCAGTTTGGTGTTGTGTGAGCCCT
GCCGGGAGGCAGACCACCAGCCTCCCAGCCACTGTACACTCCCTGTCAAAGAGGCAGCTGAGGA
ACGGCGGCGGGACTTTGGAGAAAAGTTGACACGTCTGCGGGAGCTTATGGGGGAGCTGCAGCGG
CGGAAGGTAGCTTTGGAAGGTGTCTCCAAAGACCTTCAGGCAAGGTATAAAGCAGTCCTCCAGG
AGTATGGGCATGAGGAACGCAGGGTCCAGGAGGAGTTGGCTCGCTCTCGGAAGTTCTTCACAGG
CTCTTTGGCTGAAGTTGAGAAGTGTAATAGTCAAGTGGTAGAGGAGCAGAGTTACCTGCTTAAC
ATTGCAGAGGTGCAGGCTGTGTCTCGCTGTGACTATTTTCTGGCCAAGATCAAGCAGGCTGACG
TAGCCCTACTGGAGGAGACAGCTGATGAGGAGGAGCCAGAGCTCACTGCCAGCTTGCCCCGGGA
GCTCACTCTGCAAGATGTGGAGCTCCTTAAGGTAGGTCATGTTGGCCCCCTCCAAATTGGGCAA
GCTGTTAAGAAGCCCCGGACAGTTAACATGGAAGATTCCTGGGCCATGGAGGCTGCAGCCTCTG
CTGCCTCTCCCTCTGTTACATTTAGAGAGATGGACATGAGCCCCGAGGAAGTGGTTGCCAGCCC
CAGAGCCTCGCCTGCTAAACAGCGGAGTTCTGAGGCAGCCGCCAGTATCCAGCAGTGCCTCTTT
CTCAAGAAGATGGGAGCCAAAGGCAGCACTCCAGGCATGTTCAATCTTCCTGTCAGTCTCTACG
TGACCAGTCAAGGTGAGGTGCTGGTTGCTGACCGTGGCAACTACCGTATACAAGTCTTTACTCG
CAAAGGTTTTTTGAAAGAGATACGCCGCAGCCCCAGTGGCATTGATAGCTTCGTGCTAAGCTTC
CTTGGGGCTGATTTGCCCAATCTTACTCCTCTCTCTGTGGCCATGAACTGCCATGGTCTCATTG
GTGTGACTGACAGCTATGACAACTCCCTCAAGGTATATACCTTGGATGGCCACTGCGTGGCCTG
TCACAGGAGCCAGCTGAGTAAACCATGGGGCATCACAGCCTTGCCATCTGGCCAGTTCGTGGTA
ACTGATGTGGAAGGTGGAAAACTCTGGTGTTTTACTGTTGACCGAGGAGCAGGAGTGGTCAAAT
ACAGCTGTCTCTGCAGTGCTGTGCGACCCAAGTTTGTCACCTGTGATGCTGAAGGCACCGTCTA
CTTCACCCAGGGCTTGGGCCTCAATCTGGAAAATAGGCAGAATGAGCACCACTTAGAGGGTGGT
TTCTCCATCGGTTCAGTGGGTCCTGATGGGCAGCTGGGTCGCCAGATTAGCCATTTCTTCTCAG
AGAATGAGGATTTCCGCTGCATTGCTGGCATGTGTGTGGATGCCCGTGGTGACCTCATCGTGGC
TGATAGTAGTCGCAAGGAAATTCTCCATTTTCCTAAGGGTGGGGGCTATAGTGTCCTTATTCGA
GAAGGGCTCACCTGTCCAGTGGGCATTGCCCTCACTCCTAAGGGACAGCTATTGGTCTTGGACT
GTTGGGATCATTGCATCAAGATCTACAGCTACCATCTAAGAAGATATTCTACCCCTTAGAGGAT
GAGAAATACCAGTCTTCTGCTCCCAGCCAATTTTCCTTCCCTTAGTCCTTCCTTGGTTGTTGGC
AGTATTATAGAGTAGACTTGGCCTATGTACTGATTCCAGCTGGGTTGTTCTAGCATTTTAGAAG
TTCTGTTTTTTAGTGTTTGTTATTCCCCTCTCCACACCATATCCTATCCCCTACCTAAATTTAG
AGCTTTAACAGATGCATTTCCCCAAATAGAACACATGATGGTGTTAGCTGATGTTTGATTAGAA
ACTAGGCACTTCTAAGGCTTCAGTACAGAGCCACTTTTAGGCTTTTGCCCCTGTGTTTGAAATT
TGCCCCCCTGCTTAAATCCTTGTTGATTTCTTTGGGCTTTGATGTCATTCCGTGGTTCATTGTT
TCCTTCCTATTATAATGTGCTTCATCTATGATACTTTCTCTTCAACTCTGGTTGCATTCTGGGT
GCATGCTCCAATTGGATCTGCTTCACATTTCAGTGACATTTCAGACATCGCATCCCTGTAGCAT
GATGTTCCAGGTTTGATCACCTTCACCAGTGCGAAAGCACATTCATTAAGTGCCACCAAGAGAG
AGAGAACACAGTCTCTTAGGGGAAGCAGTACTCTTGGCTAAGGAATTTGTGTCATCTTAGGTTG
GTCTCCATTGCAGATGTGCCAGAGAATGGACTGACTCTAGTTGGTTGGTGTTGAAGACTTCAGC
CTGAAAATTGCTTGCCTTTTAAAGGATTGGAATTACACCACAGCATAGGAAGATAGGAATAAGC
AAAGAGAAATGCTTGTGTAGTCTGCAAACTTAATAGCCTTTGGGGCTTTCTGTTTTTTGGGTTT
TTTTTTCCTCTTTCCACTGAACTGTGCTGAGTCGTATGAGAAACTGTACAACACAGGCCAGGGC
CAATAAAGCAGGGAGGTGGACACATCCATTTTCATTACTAAAACAAACATCAAAACTGTTGGAT
AGTTACTCTGTATTTTTCTCCAGTGAGTGTATATTGTTTGGCTTCAGAATTTATTTCCATTCTT
GTATCAGGCATTAAATAATTGATAACTTTCTTCA

hide sequence

Protein Sequences


Protein RefSeqs	XP_005320943	(Get FASTA)	NCBI Sequence Viewer
	XP_005320944	(Get FASTA)	NCBI Sequence Viewer
	XP_013212201	(Get FASTA)	NCBI Sequence Viewer
	XP_021579145	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSSTOP00000016129.2
	ENSSTOP00000025507.1
GenBank Protein	KAG3287797	(Get FASTA)	NCBI Sequence Viewer
	KAG3287798	(Get FASTA)	NCBI Sequence Viewer
	KAG3287799	(Get FASTA)	NCBI Sequence Viewer
	KAG3287800	(Get FASTA)	NCBI Sequence Viewer
	KAG3287801	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:

XP_005320944 ⟸ XM_005320887

- UniProtKB:

A0A287CW27 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MLSCSVLGCASRILQRRAMASAAASHLNLDALREVLECPICMESFTEEQLRPKLLHCGHTICRQ
CLEKLLASSINGVRCPFCSKITRITSLTQLTDNLTVLKIIDTAGLSEAVGLLMCRSCGRRLPRQ
FCRSCSLVLCEPCREADHQPPSHCTLPVKEAAEERRRDFGEKLTRLRELMGELQRRKVALEGVS
KDLQARYKAVLQEYGHEERRVQEELARSRKFFTGSLAEVEKCNSQVVEEQSYLLNIAEVQAVSR
CDYFLAKIKQADVALLEETADEEEPELTASLPRELTLQDVELLKVGHVGPLQIGQAVKKPRTVN
MEDSWAMEAAASAASPSVTFREMDMSPEEVVASPRASPAKQRSSEAAASIQQCLFLKKMGAKGS
TPGMFNLPVSLYVTSQGEVLVADRGNYRIQVFTRKGFLKEIRRSPSGIDSFVLSFLGADLPNLT
PLSVAMNCHGLIGVTDSYDNSLKVYTLDGHCVACHRSQLSKPWGITALPSGQFVVTDVEGGKLW
CFTVDRGAGVVKYSCLCSAVRPKFVTCDAEGTVYFTQGLGLNLENRQNEHHLEGGFSIGSVGPD
GQLGRQISHFFSENEDFRCIAGMCVDARGDLIVADSSRKEILHFPKGGGYSVLIREGLTCPVGI
ALTPKGQLLVLDCWDHCIKIYSYHLRRYSTP

hide sequence

RefSeq Acc Id:

XP_005320943 ⟸ XM_005320886

- UniProtKB:

A0A287CW27 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MLSCSVLGCASRILQRRAMASAAASHLNLDALREVLECPICMESFTEEQLRPKLLHCGHTICRQ
CLEKLLASSINGVRCPFCSKITRITSLTQLTDNLTVLKIIDTAGLSEAVGLLMCRSCGRRLPRQ
FCRSCSLVLCEPCREADHQPPSHCTLPVKEAAEERRRDFGEKLTRLRELMGELQRRKVALEGVS
KDLQARYKAVLQEYGHEERRVQEELARSRKFFTGSLAEVEKCNSQVVEEQSYLLNIAEVQAVSR
CDYFLAKIKQADVALLEETADEEEPELTASLPRELTLQDVELLKVGHVGPLQIGQAVKKPRTVN
MEDSWAMEAAASAASPSVTFREMDMSPEEVVASPRASPAKQRSSEAAASIQQCLFLKKMGAKGS
TPGMFNLPVSLYVTSQGEVLVADRGNYRIQVFTRKGFLKEIRRSPSGIDSFVLSFLGADLPNLT
PLSVAMNCHGLIGVTDSYDNSLKVYTLDGHCVACHRSQLSKPWGITALPSGQFVVTDVEGGKLW
CFTVDRGAGVVKYSCLCSAVRPKFVTCDAEGTVYFTQGLGLNLENRQNEHHLEGGFSIGSVGPD
GQLGRQISHFFSENEDFRCIAGMCVDARGDLIVADSSRKEILHFPKGGGYSVLIREGLTCPVGI
ALTPKGQLLVLDCWDHCIKIYSYHLRRYSTP

hide sequence

RefSeq Acc Id:

XP_013212201 ⟸ XM_013356747

- UniProtKB:

A0A287CW27 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MLSCSVLGCASRILQRRAMASAAASHLNLDALREVLECPICMESFTEEQLRPKLLHCGHTICRQ
CLEKLLASSINGVRCPFCSKITRITSLTQLTDNLTVLKIIDTAGLSEAVGLLMCRSCGRRLPRQ
FCRSCSLVLCEPCREADHQPPSHCTLPVKEAAEERRRDFGEKLTRLRELMGELQRRKVALEGVS
KDLQARYKAVLQEYGHEERRVQEELARSRKFFTGSLAEVEKCNSQVVEEQSYLLNIAEVQAVSR
CDYFLAKIKQADVALLEETADEEEPELTASLPRELTLQDVELLKVGHVGPLQIGQAVKKPRTVN
MEDSWAMEAAASAASPSVTFREMDMSPEEVVASPRASPAKQRSSEAAASIQQCLFLKKMGAKGS
TPGMFNLPVSLYVTSQGEVLVADRGNYRIQVFTRKGFLKEIRRSPSGIDSFVLSFLGADLPNLT
PLSVAMNCHGLIGVTDSYDNSLKVYTLDGHCVACHRSQLSKPWGITALPSGQFVVTDVEGGKLW
CFTVDRGAGVVKYSCLCSAVRPKFVTCDAEGTVYFTQGLGLNLENRQNEHHLEGGFSIGSVGPD
GQLGRQISHFFSENEDFRCIAGMCVDARGDLIVADSSRKEILHFPKGGGYSVLIREGLTCPVGI
ALTPKGQLLVLDCWDHCIKIYSYHLRRYSTP

hide sequence

RefSeq Acc Id:

XP_021579145 ⟸ XM_021723470

- UniProtKB:

A0A287CW27 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MLSCSVLGCASRILQRRAMASAAASHLNLDALREVLECPICMESFTEEQLRPKLLHCGHTICRQ
CLEKLLASSINGVRCPFCSKITRITSLTQLTDNLTVLKIIDTAGLSEAVGLLMCRSCGRRLPRQ
FCRSCSLVLCEPCREADHQPPSHCTLPVKEAAEERRRDFGEKLTRLRELMGELQRRKVALEGVS
KDLQARYKAVLQEYGHEERRVQEELARSRKFFTGSLAEVEKCNSQVVEEQSYLLNIAEVQAVSR
CDYFLAKIKQADVALLEETADEEEPELTASLPRELTLQDVELLKVGHVGPLQIGQAVKKPRTVN
MEDSWAMEAAASAASPSVTFREMDMSPEEVVASPRASPAKQRSSEAAASIQQCLFLKKMGAKGS
TPGMFNLPVSLYVTSQGEVLVADRGNYRIQVFTRKGFLKEIRRSPSGIDSFVLSFLGADLPNLT
PLSVAMNCHGLIGVTDSYDNSLKVYTLDGHCVACHRSQLSKPWGITALPSGQFVVTDVEGGKLW
CFTVDRGAGVVKYSCLCSAVRPKFVTCDAEGTVYFTQGLGLNLENRQNEHHLEGGFSIGSVGPD
GQLGRQISHFFSENEDFRCIAGMCVDARGDLIVADSSRKEILHFPKGGGYSVLIREGLTCPVGI
ALTPKGQLLVLDCWDHCIKIYSYHLRRYSTP

hide sequence

RefSeq Acc Id:

ENSSTOP00000016129 ⟸ ENSSTOT00000020197

RefSeq Acc Id:

ENSSTOP00000025507 ⟸ ENSSTOT00000041197

Protein Domains

B box-type RING-type

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSSTOG00000020349	Ensembl, UniProtKB/TrEMBL
Ensembl Transcript	ENSSTOT00000020197.2	UniProtKB/TrEMBL
	ENSSTOT00000041197.1	UniProtKB/TrEMBL
Gene3D-CATH	2.120.10.30	UniProtKB/TrEMBL
	3.30.40.10	UniProtKB/TrEMBL
	Classic Zinc Finger	UniProtKB/TrEMBL
InterPro	6-blade_b-propeller_TolB-like	UniProtKB/TrEMBL
	NHL_repeat	UniProtKB/TrEMBL
	TRIM32_Bbox1_Znf	UniProtKB/TrEMBL
	Znf-RING_LisH	UniProtKB/TrEMBL
	Znf_B-box	UniProtKB/TrEMBL
	Znf_RING	UniProtKB/TrEMBL
	Znf_RING/FYVE/PHD	UniProtKB/TrEMBL
	Znf_RING_CS	UniProtKB/TrEMBL
NCBI Gene	Trim32	ENTREZGENE
PANTHER	E3 UBIQUITIN-PROTEIN LIGASE TRIM32	UniProtKB/TrEMBL
	TRIPARTITE MOTIF-CONTAINING PROTEIN 2-LIKE PROTEIN	UniProtKB/TrEMBL
Pfam	NHL	UniProtKB/TrEMBL
	zf-RING_UBOX	UniProtKB/TrEMBL
PROSITE	NHL	UniProtKB/TrEMBL
	ZF_BBOX	UniProtKB/TrEMBL
	ZF_RING_1	UniProtKB/TrEMBL
	ZF_RING_2	UniProtKB/TrEMBL
SMART	BBOX	UniProtKB/TrEMBL
	RING	UniProtKB/TrEMBL
Superfamily-SCOP	B-box zinc-binding domain	UniProtKB/TrEMBL
	NHL repeat	UniProtKB/TrEMBL
	RING/U-box	UniProtKB/TrEMBL
UniProt	A0A287CW27	ENTREZGENE, UniProtKB/TrEMBL
	I3MVI4_ICTTR	UniProtKB/TrEMBL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Imported Disease Annotations - ClinVar

Imported Disease Annotations - OMIM

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Imported Disease Annotations - ClinVar

Imported Disease Annotations - OMIM