Fcer1a (Fc fragment of IgE receptor Ia) - Rat Genome Database
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Gene: Fcer1a (Fc fragment of IgE receptor Ia) Ictidomys tridecemlineatus
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Symbol: Fcer1a
Name: Fc fragment of IgE receptor Ia
RGD ID: 12616261
Description: ENCODES a protein that exhibits IgE binding (ortholog); IgE receptor activity (ortholog); INVOLVED IN activation of JUN kinase activity (ortholog); activation of MAPK activity (ortholog); cell surface receptor signaling pathway (ortholog); PARTICIPATES IN Fc epsilon receptor mediated signaling pathway; ASSOCIATED WITH asthma (ortholog); drug allergy (ortholog); Drug Eruptions (ortholog); FOUND IN cell surface (ortholog); external side of plasma membrane (ortholog); integral component of plasma membrane (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Also known as: high affinity immunoglobulin epsilon receptor subunit alpha
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: SpeTri2.0 - Squirrel SpeTri2.0 Assembly
Position:
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
SpeTri2.0NW_0049367401,201,370 - 1,206,871 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View
asthma  (ISO)
drug allergy  (ISO)
Drug Eruptions  (ISO)
rhinitis  (ISO)
urticaria  (ISO)

Molecular Pathway Annotations     Click to see Annotation Detail View
References

Genomics

Comparative Map Data
Fcer1a
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
SpeTri2.0NW_0049367401,201,370 - 1,206,871 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
FCER1A
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl1159,289,714 - 159,308,224 (+)EnsemblGRCh38hg38GRCh38
GRCh381159,283,575 - 159,308,202 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh371159,253,365 - 159,277,992 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361157,526,128 - 157,544,638 (+)NCBINCBI36hg18NCBI36
Build 341156,072,576 - 156,091,086NCBI
Celera1132,329,745 - 132,348,256 (+)NCBI
Cytogenetic Map1q23.2NCBI
HuRef1130,610,827 - 130,635,025 (+)NCBIHuRef
CHM1_11160,649,107 - 160,673,443 (+)NCBICHM1_1
Fcer1a
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391173,048,836 - 173,054,799 (-)NCBIGRCm39mm39
GRCm39 Ensembl1173,048,851 - 173,054,781 (-)Ensembl
GRCm381173,221,269 - 173,227,232 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1173,221,284 - 173,227,214 (-)EnsemblGRCm38mm10GRCm38
MGSCv371175,151,402 - 175,157,360 (-)NCBIGRCm37mm9NCBIm37
MGSCv361175,057,959 - 175,063,889 (-)NCBImm8
Celera1176,073,170 - 176,079,126 (-)NCBICelera
Cytogenetic Map1H3NCBI
cM Map180.33NCBI
Fcer1a
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.21385,686,099 - 85,692,394 (-)NCBI
Rnor_6.0 Ensembl1391,730,925 - 91,737,053 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.01391,727,253 - 91,737,106 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01396,245,261 - 96,251,522 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41389,429,982 - 89,436,507 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11389,618,865 - 89,625,338 (-)NCBI
Celera1385,289,763 - 85,295,958 (-)NCBICelera
RH 3.4 Map13566.1RGD
Cytogenetic Map13q24NCBI
Fcer1a
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495546811,094,788 - 11,101,173 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495546811,094,792 - 11,101,191 (+)NCBIChiLan1.0ChiLan1.0
FCER1A
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.11138,439,921 - 138,458,258 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1138,439,921 - 138,458,258 (+)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v01134,655,230 - 134,660,961 (+)NCBIMhudiblu_PPA_v0panPan3
FCER1A
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1 Ensembl3822,683,477 - 22,690,763 (-)EnsemblCanFam3.1canFam3CanFam3.1
CanFam3.13822,683,478 - 22,688,842 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
FCER1A
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl491,118,879 - 91,125,437 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1491,118,867 - 91,125,448 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2499,069,615 - 99,075,656 (+)NCBISscrofa10.2Sscrofa10.2susScr3
FCER1A
(Chlorocebus sabaeus - African green monkey)
Vervet AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1204,635,316 - 4,640,787 (-)NCBI
ChlSab1.1 Ensembl204,635,328 - 4,640,590 (-)Ensembl
Fcer1a
(Heterocephalus glaber - naked mole-rat)
Molerat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046247942,003,031 - 2,008,930 (-)NCBI


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts XM_005339418 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AGTP01101631 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: XM_005339418   ⟹   XP_005339475
RefSeq Status:
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
SpeTri2.0NW_0049367401,201,370 - 1,206,871 (-)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_005339475 (Get FASTA)   NCBI Sequence Viewer  
Reference Sequences
RefSeq Acc Id: XP_005339475   ⟸   XM_005339418
- Sequence:


Additional Information

Database Acc Id Source(s)
NCBI Gene Fcer1a ENTREZGENE