Tpm3 (tropomyosin 3) - Rat Genome Database

Name: Tpm3
Creator: Rat Genome Database
License: Creative Commons CC BY 4.0
Keywords: Rat Gene RGD Genome

Gene: Tpm3 (tropomyosin 3) Ictidomys tridecemlineatus

Analyze

Symbol:

Tpm3

Name:

tropomyosin 3

RGD ID:

12616211

Description:

ENCODES a protein that exhibits actin binding (inferred); actin filament binding (inferred); INVOLVED IN actin filament organization (inferred); muscle contraction (inferred); ASSOCIATED WITH adenocarcinoma (ortholog); Animal Mammary Neoplasms (ortholog); carcinoma (ortholog); FOUND IN actin cytoskeleton (ortholog); brush border (ortholog); cleavage furrow (ortholog)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

tropomyosin 3, transcript variant X1; tropomyosin 3, transcript variant X10; tropomyosin 3, transcript variant X11; tropomyosin 3, transcript variant X12; tropomyosin 3, transcript variant X13; tropomyosin 3, transcript variant X14; tropomyosin 3, transcript variant X15; tropomyosin 3, transcript variant X16; tropomyosin 3, transcript variant X17; tropomyosin 3, transcript variant X18; tropomyosin 3, transcript variant X19; tropomyosin 3, transcript variant X2; tropomyosin 3, transcript variant X3; tropomyosin 3, transcript variant X4; tropomyosin 3, transcript variant X5; tropomyosin 3, transcript variant X6; tropomyosin 3, transcript variant X7; tropomyosin 3, transcript variant X8; tropomyosin 3, transcript variant X9; tropomyosin alpha-3 chain

RGD Orthologs

Alliance Genes

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	TPM3 (tropomyosin 3)	NCBI	Ortholog
Mus musculus (house mouse):	Tpm3 (tropomyosin 3, gamma)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus norvegicus (Norway rat):	Tpm3 (tropomyosin 3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Tpm3 (tropomyosin 3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	LOC100977130 (tropomyosin alpha-3 chain)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	TPM3 (tropomyosin 3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	TPM3 (tropomyosin 3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	TPM3 (tropomyosin 3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Tpm3 (tropomyosin 3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline

Latest Assembly:

SpeTri2.0 - Squirrel SpeTri2.0 Assembly

Position:

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405058	24,829,962 - 24,859,535 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936580	3,860,190 - 3,889,978 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936580	3,860,185 - 3,893,251 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

adenocarcinoma (ISO)

Animal Mammary Neoplasms (ISO)

carcinoma (ISO)

Charcot-Marie-Tooth disease type 2 (ISO)

Colonic Neoplasms (ISO)

congenital myopathy 4A (ISO)

congenital structural myopathy (ISO)

Experimental Liver Cirrhosis (ISO)

Experimental Mammary Neoplasms (ISO)

gastrointestinal stromal tumor (ISO)

genetic disease (ISO)

immunodeficiency 42 (ISO)

MHC class II deficiency (ISO)

myopathy (ISO)

nemaline myopathy (ISO)

nemaline myopathy 1 (ISO)

parathyroid carcinoma (ISO)

severe congenital neutropenia 3 (ISO)

severe congenital neutropenia 5 (ISO)

Stomach Neoplasms (ISO)

thyroid gland papillary carcinoma (ISO)

Thyroid Neoplasms (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

actin filament organization (IEA)

muscle contraction (IEA)

Cellular Component

actin cytoskeleton (ISO)

actin filament (IEA)

brush border (ISO)

cleavage furrow (ISO)

cortical cytoskeleton (ISO)

cytoplasm (ISO)

cytoskeleton (IEA)

cytosol (ISO)

growth cone (ISO)

neuron projection (ISO)

podosome (ISO)

stress fiber (ISO)

Molecular Function

actin binding (IEA)

actin filament binding (IEA)

protein binding (ISO)

References

Additional References at PubMed

PMID:30032202

Genomics

Comparative Map Data

Tpm3
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405058	24,829,962 - 24,859,535 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936580	3,860,190 - 3,889,978 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936580	3,860,185 - 3,893,251 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

TPM3
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	1	154,155,308 - 154,192,100 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	1	154,155,308 - 154,194,648 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	1	154,127,784 - 154,164,576 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	1	152,394,404 - 152,431,233 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Celera	1	127,199,522 - 127,236,328 (-)	NCBI		Celera
Cytogenetic Map	1	q21.3	NCBI
HuRef	1	125,491,124 - 125,527,939 (-)	NCBI		HuRef
CHM1_1	1	155,524,124 - 155,560,933 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	1	153,292,536 - 153,329,333 (-)	NCBI		T2T-CHM13v2.0

Tpm3
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	3	89,979,958 - 90,008,209 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	3	89,979,956 - 90,008,209 (+)	Ensembl		GRCm39 Ensembl
GRCm38	3	90,072,651 - 90,100,902 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	3	90,072,649 - 90,100,902 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	3	89,876,616 - 89,904,526 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	3	90,158,621 - 90,186,531 (+)	NCBI		MGSCv36	mm8
Celera	3	90,109,227 - 90,137,142 (+)	NCBI		Celera
Cytogenetic Map	3	F1	NCBI
cM Map	3	39.2	NCBI

Tpm3
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	2	177,812,534 - 177,842,661 (+)	NCBI		GRCr8
mRatBN7.2	2	175,517,198 - 175,545,014 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	2	175,517,226 - 175,545,013 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	2	182,663,687 - 182,691,187 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	2	180,686,074 - 180,713,576 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	2	175,286,696 - 175,314,195 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	2	189,423,534 - 189,451,340 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	2	189,423,559 - 189,451,029 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	2	208,856,598 - 208,884,385 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	2	182,303,994 - 182,324,994 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	2	182,254,141 - 182,273,295 (+)	NCBI
Celera	2	169,456,120 - 169,483,632 (+)	NCBI		Celera
Cytogenetic Map	2	q34	NCBI

Tpm3
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955545	715,280 - 746,575 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955545	715,860 - 746,580 (-)	NCBI	ChiLan1.0	ChiLan1.0

LOC100977130
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	1	95,647,935 - 95,677,160 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	1	95,383,171 - 95,413,437 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	1	129,511,914 - 129,538,703 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	1	133,126,641 - 133,153,318 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	1	133,126,641 - 133,161,894 (-)	Ensembl	panpan1.1		panPan2

TPM3
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	7	43,039,360 - 43,067,297 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	7	43,039,382 - 43,067,296 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	7	42,535,529 - 42,557,676 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	7	42,909,915 - 42,937,862 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	7	42,885,880 - 42,937,862 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	7	42,694,385 - 42,716,552 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	7	42,747,421 - 42,769,582 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	7	43,031,793 - 43,053,953 (+)	NCBI		UU_Cfam_GSD_1.0

TPM3
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	4	95,542,473 - 95,572,938 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	4	95,542,329 - 95,572,946 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	4	104,459,666 - 104,490,146 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

TPM3
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	20	9,630,056 - 9,669,819 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	20	9,638,678 - 9,653,039 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666038	8,999,639 - 9,027,826 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Tpm3
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624885	3,109,436 - 3,139,789 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624885	3,109,360 - 3,139,664 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Expression

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_005331280	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_005331282	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_005331284	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_005331285	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_005331286	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_005331287	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_005331289	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_005331290	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_005331292	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_013361125	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_013361126	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_013361128	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_013361130	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_021730489	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_021730490	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_021730491	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_021730492	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_021730494	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_021730495	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_040287600	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	JAESOR010000117	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSSTOT00000023433 ⟹ ENSSTOP00000018908

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
SpeTri2.0 Ensembl	NW_004936580	3,860,190 - 3,889,978 (-)	Ensembl

RefSeq Acc Id:

ENSSTOT00000032762 ⟹ ENSSTOP00000025789

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
SpeTri2.0 Ensembl	NW_004936580	3,860,994 - 3,882,959 (-)	Ensembl

RefSeq Acc Id:

ENSSTOT00000033705 ⟹ ENSSTOP00000027543

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
SpeTri2.0 Ensembl	NW_004936580	3,869,885 - 3,889,978 (-)	Ensembl

RefSeq Acc Id:

ENSSTOT00000039883 ⟹ ENSSTOP00000031657

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
SpeTri2.0 Ensembl	NW_004936580	3,861,006 - 3,883,056 (-)	Ensembl

RefSeq Acc Id:

XM_005331280 ⟹ XP_005331337

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024405058	24,839,489 - 24,859,533 (-)	NCBI
SpeTri2.0	NW_004936580	3,869,876 - 3,890,057 (-)	NCBI

Sequence:

show sequence

TTGTTGGTGGTGATGTCAGTCCATCAAAGTGTCTCACCCTGTGTTCCCCCGGGAGAATACTGAT
GGGGGTGGAGGGAGTTGGAAAGACCATATTGGGAATAAGAGGTGGAGCCCTAAGCAGAGATAAA
GGCTCAAGTCTGGGGACCCCTCCTTGCTCCTCCTTTCTTGTCCTAGTCTCTAGTTCTCCATTGT
TCACAGGTAATCCCACCAACAGCCACTGCTCATGATGGAGGCCATCAAGAAAAAAATGCAGATG
CTGAAGTTGGACAAGGAGAACGCTCTGGACCGGGCAGAGCAGGCTGAAGCGGAGCAGAAGCAGG
CCGAGGAAAGGAGTAAGCAGCTGGAGGATGAATTAGCAGCTATGCAGAAGAAGCTGAAAGGGAC
AGAGGATGAGCTGGACAAGTATTCTGAAGCCTTAAAGGATGCCCAGGAGAAGCTGGAGCTAGCA
GAGAAGAAAGCAGCTGATGCTGAGGCTGAGGTAGCCTCCTTGAACCGAAGGATCCAACTGGTTG
AAGAGGAGCTGGACCGTGCTCAGGAGCGCCTTGCTACTGCCCTGCAAAAGCTGGAGGAAGCAGA
AAAAGCTGCTGATGAGAGTGAGAGAGGTATGAAGGTTATTGAAAACCGGGCCCTAAAAGATGAA
GAAAAGATGGAACTCCAGGAAATCCAACTCAAAGAAGCTAAGCACATTGCAGAAGAAGCAGATA
GGAAGTATGAAGAGGTGGCTCGTAAGTTAGTGATTATTGAAGGAGACTTGGAACGCACAGAGGA
ACGAGCTGAGCTGGCAGAGTCTAAGTGTTCTGAGCTGGAGGAGGAGCTGAAGAATGTCACCAAC
AACCTCAAGTCTCTTGAGGCTCAGGCGGAGAAGTACTCTCAAAAAGAAGACAAATATGAGGAAG
AAATAAAGATTCTCACTGATAAACTCAAGGAGGCAGAGACCCGCGCTGAGTTTGCCGAGAGATC
GGTAGCCAAACTGGAAAAGACAATTGATGATTTGGAAGATGAGCTCTATGCCCAGAAACTGAAG
TACAAGGCCATTAGCGAGGAGCTGGACCACGCCCTCAATGACATGACTTCTATATGACTACCAT
CGTTTCTGCTCTGTTCTGGAACTGCCCCTTCCTGGGGAACCCAGCGCCCACTCTCGCTCTGGAT
TCTATTGGTCAGCCTCGCTGGTCCCCAAGGCATCAGGGTGCAGGGGACACAAAGCAACTTATGT
ACTCTATTCTACCCCCACCCCAAATTAAAATGCTAAGCTGCTGAAAGCCTCA

hide sequence

RefSeq Acc Id:

XM_005331282 ⟹ XP_005331339

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024405058	24,829,962 - 24,859,532 (-)	NCBI
SpeTri2.0	NW_004936580	3,860,185 - 3,890,059 (-)	NCBI

Sequence:

show sequence

TGTTGTTGGTGGTGATGTCAGTCCATCAAAGTGTCTCACCCTGTGTTCCCCCGGGAGAATACTG
ATGGGGGTGGAGGGAGTTGGAAAGACCATATTGGGAATAAGAGGTGGAGCCCTAAGCAGAGATA
AAGGCTCAAGTCTGGGGACCCCTCCTTGCTCCTCCTTTCTTGTCCTAGTCTCTAGTTCTCCATT
GTTCACAGGTAATCCCACCAACAGCCACTGCTCATGATGGAGGCCATCAAGAAAAAAATGCAGA
TGCTGAAGTTGGACAAGGAGAACGCTCTGGACCGGGCAGAGCAGGCTGAAGCGGAGCAGAAGCA
GGCCGAGGAAAGGAGTAAGCAGCTGGAGGATGAATTAGCAGCTATGCAGAAGAAGCTGAAAGGG
ACAGAGGATGAGCTGGACAAGTATTCTGAAGCCTTAAAGGATGCCCAGGAGAAGCTGGAGCTAG
CAGAGAAGAAAGCAGCTGATGCTGAGGCTGAGGTAGCCTCCTTGAACCGAAGGATCCAACTGGT
TGAAGAGGAGCTGGACCGTGCTCAGGAGCGCCTTGCTACTGCCCTGCAAAAGCTGGAGGAAGCA
GAAAAAGCTGCTGATGAGAGTGAGAGAGGTATGAAGGTTATTGAAAACCGGGCCCTAAAAGATG
AAGAAAAGATGGAACTCCAGGAAATCCAACTCAAAGAAGCTAAGCACATTGCAGAAGAAGCAGA
TAGGAAGTATGAAGAGGTGGCTCGTAAGTTAGTGATTATTGAAGGAGACTTGGAACGCACAGAG
GAACGAGCTGAGCTGGCAGAGTCCCGTTGCCGAGAGATGGATGAGCAGATCAGACTGATGGACC
AGAACCTGAAGTGTCTGAATGCTGCTGAAGAAAAGTACTCTCAAAAAGAAGACAAATATGAGGA
AGAAATAAAGATTCTCACTGATAAACTCAAGGAGGCAGAGACCCGCGCTGAGTTTGCCGAGAGA
TCGGTAGCCAAACTGGAAAAGACAATTGATGATTTGGAAGATAAGCTGAAATGCACCAAAGAGG
AGCACCTCTGTACACAAAGGATGCTGGACCAGACTCTGCTTGACCTGAATGAGATGTAGAGCTC
CCCAGTCCCGCCCTGCTGCTGCTCCTCCCTCTGACCCTGACTCCGCCTGAGGCCAGCCAGCCCG
AAGCTGACCTTGAAACTGAGGGCTGATCTTTAACTGGAAGGCTGCTTTCTCCTTTCAACACCCC
CTCAACCCCCTACCCCCTTGTCTTTTTCACCAAACTGTCTCTGCTTCTTCCCAGAGATTCCAGC
TGGGCTAGAGGCTGAGCACCTTTGGGAACAGCATTTAAGGGAATGTGAGCACAACGCAAAGTGT
CTTTAAAAGCATGTTGTGATGTACACATTTTGTAATTACTTTTTTTTGTTGTTACAGTAACCAT
TTGTAAAACATTCCAAATAATTCCATAGCTCTGAAGCAGCAATCTAATTCCCTTCTCACTTTTG
GAAGGTAACTTTCCAGCCTAATCCCTATTGCCCTCTCCATAGAGGAGGAAAAGAGGAATGGGCC
TGCCTTACTGAGAGCCAAACAGAGCCCAGGAAAGACTCTACTATGGCAAACCTCATTGCTCTGT
GCAAAGTACTAGCCAAACCAGAAAGGTGATTCCAAGAGGAGTTAGCCAAAAAAACAAAAACCTT
GCTATTCAGGTTTTGTTTTATTTTTAGCTTTAAGGTATCTTTAGACAACTGTATTCTTATTTTT
TACTTTTTTTCATCAGAAATGACCAAATTAACATGGTGAGACCTCTGAGACTTTTTGTTTTTCT
GGTGCTGGGGATTGAACCCAG

hide sequence

RefSeq Acc Id:

XM_005331284 ⟹ XP_005331341

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024405058	24,831,496 - 24,859,533 (-)	NCBI
SpeTri2.0	NW_004936580	3,861,881 - 3,890,056 (-)	NCBI

Sequence:

show sequence

TGTTGGTGGTGATGTCAGTCCATCAAAGTGTCTCACCCTGTGTTCCCCCGGGAGAATACTGATG
GGGGTGGAGGGAGTTGGAAAGACCATATTGGGAATAAGAGGTGGAGCCCTAAGCAGAGATAAAG
GCTCAAGTCTGGGGACCCCTCCTTGCTCCTCCTTTCTTGTCCTAGTCTCTAGTTCTCCATTGTT
CACAGGTAATCCCACCAACAGCCACTGCTCATGATGGAGGCCATCAAGAAAAAAATGCAGATGC
TGAAGTTGGACAAGGAGAACGCTCTGGACCGGGCAGAGCAGGCTGAAGCGGAGCAGAAGCAGGC
CGAGGAAAGGAGTAAGCAGCTGGAGGATGAATTAGCAGCTATGCAGAAGAAGCTGAAAGGGACA
GAGGATGAGCTGGACAAGTATTCTGAAGCCTTAAAGGATGCCCAGGAGAAGCTGGAGCTAGCAG
AGAAGAAAGCAGCTGATGCTGAGGCTGAGGTAGCCTCCTTGAACCGAAGGATCCAACTGGTTGA
AGAGGAGCTGGACCGTGCTCAGGAGCGCCTTGCTACTGCCCTGCAAAAGCTGGAGGAAGCAGAA
AAAGCTGCTGATGAGAGTGAGAGAGGTATGAAGGTTATTGAAAACCGGGCCCTAAAAGATGAAG
AAAAGATGGAACTCCAGGAAATCCAACTCAAAGAAGCTAAGCACATTGCAGAAGAAGCAGATAG
GAAGTATGAAGAGGTGGCTCGTAAGTTAGTGATTATTGAAGGAGACTTGGAACGCACAGAGGAA
CGAGCTGAGCTGGCAGAGTCTAAGTGTTCTGAGCTGGAGGAGGAGCTGAAGAATGTCACCAACA
ACCTCAAGTCTCTTGAGGCTCAGGCGGAGAAGTACTCTCAAAAAGAAGACAAATATGAGGAAGA
AATAAAGATTCTCACTGATAAACTCAAGGAGGCAGAGACCCGCGCTGAGTTTGCCGAGAGATCG
GTAGCCAAACTGGAAAAGACAATTGATGATTTGGAAGAGCGTCTCTACAGCCAACTTGAGCGAA
ACCGCCTGCTTTCTAATGAGCTGAAGCTAACGCTGCATGATCTGTGTGACTGATGGGCAGGGCT
CACAGATGCCCAGTAAACCACTGACCTGGACCCCAGCAAAAAAAGCTGATTGTCTTTTAAAAAG
TTATTATTTTGCCCTAAGCAAGTTGCTTTTTAATTGGGGCAGTTAGAACACTGTTGATTTCCTA
ACCGCATTGTTAAGTTAGAACAGTTGGATACTGCATTTTTATCCCTTTAAAAGAGATGATGTAA
CTCATCTCTGAAGGAAAGGGCCTGAGATTATAGTGAAAACTTTTCTCCCCTTTCACTGCTGCTC
TTTCATGTGTGCACTGACTAGGATATGTTCTTTTGCATGGATGTTTTCTAACAATAAAGAGACT
GACTTTA

hide sequence

RefSeq Acc Id:

XM_005331285 ⟹ XP_005331342

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024405058	24,829,962 - 24,852,679 (-)	NCBI
SpeTri2.0	NW_004936580	3,860,185 - 3,883,056 (-)	NCBI

Sequence:

show sequence

TATTTCAGGGCGTAGCAGGCGGAAGTAGGGGTGAGAAGCGGCTGCAGCGCCGAGAGGAGGCAGA
AGGCAGATAACGAGAAGCCGCTGGGTGGGCACCATGGCCGGGATCACCACCGTCGAGGCGGTGA
AGCGCAAGATCCAGGTTCTGCAGCAGCAAGCGGATGATGCCGAGGAGAGGGCTGAGCGCCTCCA
GCGGGAAGTTGAGGGAGAAAGGCGGGCCCGGGAACAGGCTGAGGCTGAGGTAGCCTCCTTGAAC
CGAAGGATCCAACTGGTTGAAGAGGAGCTGGACCGTGCTCAGGAGCGCCTTGCTACTGCCCTGC
AAAAGCTGGAGGAAGCAGAAAAAGCTGCTGATGAGAGTGAGAGAGGTATGAAGGTTATTGAAAA
CCGGGCCCTAAAAGATGAAGAAAAGATGGAACTCCAGGAAATCCAACTCAAAGAAGCTAAGCAC
ATTGCAGAAGAAGCAGATAGGAAGTATGAAGAGGTGGCTCGTAAGTTAGTGATTATTGAAGGAG
ACTTGGAACGCACAGAGGAACGAGCTGAGCTGGCAGAGTCCCGTTGCCGAGAGATGGATGAGCA
GATCAGACTGATGGACCAGAACCTGAAGTGTCTGAATGCTGCTGAAGAAAAGTACTCTCAAAAA
GAAGACAAATATGAGGAAGAAATAAAGATTCTCACTGATAAACTCAAGGAGGCAGAGACCCGCG
CTGAGTTTGCCGAGAGATCGGTAGCCAAACTGGAAAAGACAATTGATGATTTGGAAGATAAGCT
GAAATGCACCAAAGAGGAGCACCTCTGTACACAAAGGATGCTGGACCAGACTCTGCTTGACCTG
AATGAGATGTAGAGCTCCCCAGTCCCGCCCTGCTGCTGCTCCTCCCTCTGACCCTGACTCCGCC
TGAGGCCAGCCAGCCCGAAGCTGACCTTGAAACTGAGGGCTGATCTTTAACTGGAAGGCTGCTT
TCTCCTTTCAACACCCCCTCAACCCCCTACCCCCTTGTCTTTTTCACCAAACTGTCTCTGCTTC
TTCCCAGAGATTCCAGCTGGGCTAGAGGCTGAGCACCTTTGGGAACAGCATTTAAGGGAATGTG
AGCACAACGCAAAGTGTCTTTAAAAGCATGTTGTGATGTACACATTTTGTAATTACTTTTTTTT
GTTGTTACAGTAACCATTTGTAAAACATTCCAAATAATTCCATAGCTCTGAAGCAGCAATCTAA
TTCCCTTCTCACTTTTGGAAGGTAACTTTCCAGCCTAATCCCTATTGCCCTCTCCATAGAGGAG
GAAAAGAGGAATGGGCCTGCCTTACTGAGAGCCAAACAGAGCCCAGGAAAGACTCTACTATGGC
AAACCTCATTGCTCTGTGCAAAGTACTAGCCAAACCAGAAAGGTGATTCCAAGAGGAGTTAGCC
AAAAAAACAAAAACCTTGCTATTCAGGTTTTGTTTTATTTTTAGCTTTAAGGTATCTTTAGACA
ACTGTATTCTTATTTTTTACTTTTTTTCATCAGAAATGACCAAATTAACATGGTGAGACCTCTG
AGACTTTTTGTTTTTCTGGTGCTGGGGATTGAACCCAG

hide sequence

RefSeq Acc Id:

XM_005331286 ⟹ XP_005331343

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024405058	24,840,349 - 24,852,679 (-)	NCBI
SpeTri2.0	NW_004936580	3,870,731 - 3,883,056 (-)	NCBI

Sequence:

show sequence

TATTTCAGGGCGTAGCAGGCGGAAGTAGGGGTGAGAAGCGGCTGCAGCGCCGAGAGGAGGCAGA
AGGCAGATAACGAGAAGCCGCTGGGTGGGCACCATGGCCGGGATCACCACCGTCGAGGCGGTGA
AGCGCAAGATCCAGGTTCTGCAGCAGCAAGCGGATGATGCCGAGGAGAGGGCTGAGCGCCTCCA
GCGGGAAGTTGAGGGAGAAAGGCGGGCCCGGGAACAGGCTGAGGCTGAGGTAGCCTCCTTGAAC
CGAAGGATCCAACTGGTTGAAGAGGAGCTGGACCGTGCTCAGGAGCGCCTTGCTACTGCCCTGC
AAAAGCTGGAGGAAGCAGAAAAAGCTGCTGATGAGAGTGAGAGAGGTATGAAGGTTATTGAAAA
CCGGGCCCTAAAAGATGAAGAAAAGATGGAACTCCAGGAAATCCAACTCAAAGAAGCTAAGCAC
ATTGCAGAAGAAGCAGATAGGAAGTATGAAGAGGTGGCTCGTAAGTTAGTGATTATTGAAGGAG
ACTTGGAACGCACAGAGGAACGAGCTGAGCTGGCAGAGTCTAAGTGTTCTGAGCTGGAGGAGGA
GCTGAAGAATGTCACCAACAACCTCAAGTCTCTTGAGGCTCAGGCGGAGAAGTACTCTCAAAAA
GAAGACAAATATGAGGAAGAAATAAAGATTCTCACTGATAAACTCAAGGAGGCAGAGACCCGCG
CTGAGTTTGCCGAGAGATCGGTAGCCAAACTGGAAAAGACAATTGATGATTTGGAAGATGAGCT
CTATGCCCAGAAACTGAAGTACAAGGCCATTAGCGAGGAGCTGGACCACGCCCTCAATGACATG
ACTTCTATGTAA

hide sequence

RefSeq Acc Id:

XM_005331287 ⟹ XP_005331344

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024405058	24,829,962 - 24,852,678 (-)	NCBI
SpeTri2.0	NW_004936580	3,860,185 - 3,883,056 (-)	NCBI

Sequence:

show sequence

TATTTCAGGGCGTAGCAGGCGGAAGTAGGGGTGAGAAGCGGCTGCAGCGCCGAGAGGAGGCAGA
AGGCAGATAACGAGAAGCCGCTGGGTGGGCACCATGGCCGGGATCACCACCGTCGAGGCGGTGA
AGCGCAAGATCCAGGTTCTGCAGCAGCAAGCGGATGATGCCGAGGAGAGGGCTGAGCGCCTCCA
GCGGGAAGTTGAGGGAGAAAGGCGGGCCCGGGAACAGGCTGAGGCTGAGGTAGCCTCCTTGAAC
CGAAGGATCCAACTGGTTGAAGAGGAGCTGGACCGTGCTCAGGAGCGCCTTGCTACTGCCCTGC
AAAAGCTGGAGGAAGCAGAAAAAGCTGCTGATGAGAGTGAGAGAGGTATGAAGGTTATTGAAAA
CCGGGCCCTAAAAGATGAAGAAAAGATGGAACTCCAGGAAATCCAACTCAAAGAAGCTAAGCAC
ATTGCAGAAGAAGCAGATAGGAAGTATGAAGAGGTGGCTCGTAAGTTAGTGATTATTGAAGGAG
ACTTGGAACGCACAGAGGAACGAGCTGAGCTGGCAGAGTCTAAGTGTTCTGAGCTGGAGGAGGA
GCTGAAGAATGTCACCAACAACCTCAAGTCTCTTGAGGCTCAGGCGGAGAAGTACTCTCAAAAA
GAAGACAAATATGAGGAAGAAATAAAGATTCTCACTGATAAACTCAAGGAGGCAGAGACCCGCG
CTGAGTTTGCCGAGAGATCGGTAGCCAAACTGGAAAAGACAATTGATGATTTGGAAGATAAGCT
GAAATGCACCAAAGAGGAGCACCTCTGTACACAAAGGATGCTGGACCAGACTCTGCTTGACCTG
AATGAGATGTAGAGCTCCCCAGTCCCGCCCTGCTGCTGCTCCTCCCTCTGACCCTGACTCCGCC
TGAGGCCAGCCAGCCCGAAGCTGACCTTGAAACTGAGGGCTGATCTTTAACTGGAAGGCTGCTT
TCTCCTTTCAACACCCCCTCAACCCCCTACCCCCTTGTCTTTTTCACCAAACTGTCTCTGCTTC
TTCCCAGAGATTCCAGCTGGGCTAGAGGCTGAGCACCTTTGGGAACAGCATTTAAGGGAATGTG
AGCACAACGCAAAGTGTCTTTAAAAGCATGTTGTGATGTACACATTTTGTAATTACTTTTTTTT
GTTGTTACAGTAACCATTTGTAAAACATTCCAAATAATTCCATAGCTCTGAAGCAGCAATCTAA
TTCCCTTCTCACTTTTGGAAGGTAACTTTCCAGCCTAATCCCTATTGCCCTCTCCATAGAGGAG
GAAAAGAGGAATGGGCCTGCCTTACTGAGAGCCAAACAGAGCCCAGGAAAGACTCTACTATGGC
AAACCTCATTGCTCTGTGCAAAGTACTAGCCAAACCAGAAAGGTGATTCCAAGAGGAGTTAGCC
AAAAAAACAAAAACCTTGCTATTCAGGTTTTGTTTTATTTTTAGCTTTAAGGTATCTTTAGACA
ACTGTATTCTTATTTTTTACTTTTTTTCATCAGAAATGACCAAATTAACATGGTGAGACCTCTG
AGACTTTTTGTTTTTCTGGTGCTGGGGATTGAACCCAG

hide sequence

RefSeq Acc Id:

XM_005331289 ⟹ XP_005331346

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024405058	24,831,496 - 24,852,679 (-)	NCBI
SpeTri2.0	NW_004936580	3,861,881 - 3,883,056 (-)	NCBI

Sequence:

show sequence

TATTTCAGGGCGTAGCAGGCGGAAGTAGGGGTGAGAAGCGGCTGCAGCGCCGAGAGGAGGCAGA
AGGCAGATAACGAGAAGCCGCTGGGTGGGCACCATGGCCGGGATCACCACCGTCGAGGCGGTGA
AGCGCAAGATCCAGGTTCTGCAGCAGCAAGCGGATGATGCCGAGGAGAGGGCTGAGCGCCTCCA
GCGGGAAGTTGAGGGAGAAAGGCGGGCCCGGGAACAGGCTGAGGCTGAGGTAGCCTCCTTGAAC
CGAAGGATCCAACTGGTTGAAGAGGAGCTGGACCGTGCTCAGGAGCGCCTTGCTACTGCCCTGC
AAAAGCTGGAGGAAGCAGAAAAAGCTGCTGATGAGAGTGAGAGAGGTATGAAGGTTATTGAAAA
CCGGGCCCTAAAAGATGAAGAAAAGATGGAACTCCAGGAAATCCAACTCAAAGAAGCTAAGCAC
ATTGCAGAAGAAGCAGATAGGAAGTATGAAGAGGTGGCTCGTAAGTTAGTGATTATTGAAGGAG
ACTTGGAACGCACAGAGGAACGAGCTGAGCTGGCAGAGTCTAAGTGTTCTGAGCTGGAGGAGGA
GCTGAAGAATGTCACCAACAACCTCAAGTCTCTTGAGGCTCAGGCGGAGAAGTACTCTCAAAAA
GAAGACAAATATGAGGAAGAAATAAAGATTCTCACTGATAAACTCAAGGAGGCAGAGACCCGCG
CTGAGTTTGCCGAGAGATCGGTAGCCAAACTGGAAAAGACAATTGATGATTTGGAAGAGCGTCT
CTACAGCCAACTTGAGCGAAACCGCCTGCTTTCTAATGAGCTGAAGCTAACGCTGCATGATCTG
TGTGACTGATGGGCAGGGCTCACAGATGCCCAGTAAACCACTGACCTGGACCCCAGCAAAAAAA
GCTGATTGTCTTTTAAAAAGTTATTATTTTGCCCTAAGCAAGTTGCTTTTTAATTGGGGCAGTT
AGAACACTGTTGATTTCCTAACCGCATTGTTAAGTTAGAACAGTTGGATACTGCATTTTTATCC
CTTTAAAAGAGATGATGTAACTCATCTCTGAAGGAAAGGGCCTGAGATTATAGTGAAAACTTTT
CTCCCCTTTCACTGCTGCTCTTTCATGTGTGCACTGACTAGGATATGTTCTTTTGCATGGATGT
TTTCTAACAATAAAGAGACTGACTTTA

hide sequence

RefSeq Acc Id:

XM_005331290 ⟹ XP_005331347

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024405058	24,831,496 - 24,852,680 (-)	NCBI
SpeTri2.0	NW_004936580	3,861,881 - 3,883,056 (-)	NCBI

Sequence:

show sequence

TATTTCAGGGCGTAGCAGGCGGAAGTAGGGGTGAGAAGCGGCTGCAGCGCCGAGAGGAGGCAGA
AGGCAGATAACGAGAAGCCGCTGGGTGGGCACCATGGCCGGGATCACCACCGTCGAGGCGGTGA
AGCGCAAGATCCAGGTTCTGCAGCAGCAAGCGGATGATGCCGAGGAGAGGGCTGAGCGCCTCCA
GCGGGAAGTTGAGGGAGAAAGGCGGGCCCGGGAACAGGCTGAGGCTGAGGTAGCCTCCTTGAAC
CGAAGGATCCAACTGGTTGAAGAGGAGCTGGACCGTGCTCAGGAGCGCCTTGCTACTGCCCTGC
AAAAGCTGGAGGAAGCAGAAAAAGCTGCTGATGAGAGTGAGAGAGGTATGAAGGTTATTGAAAA
CCGGGCCCTAAAAGATGAAGAAAAGATGGAACTCCAGGAAATCCAACTCAAAGAAGCTAAGCAC
ATTGCAGAAGAAGCAGATAGGAAGTATGAAGAGGTGGCTCGTAAGTTAGTGATTATTGAAGGAG
ACTTGGAACGCACAGAGGAACGAGCTGAGCTGGCAGAGTCCCGTTGCCGAGAGATGGATGAGCA
GATCAGACTGATGGACCAGAACCTGAAGTGTCTGAATGCTGCTGAAGAAAAGTACTCTCAAAAA
GAAGACAAATATGAGGAAGAAATAAAGATTCTCACTGATAAACTCAAGGAGGCAGAGACCCGCG
CTGAGTTTGCCGAGAGATCGGTAGCCAAACTGGAAAAGACAATTGATGATTTGGAAGAGCGTCT
CTACAGCCAACTTGAGCGAAACCGCCTGCTTTCTAATGAGCTGAAGCTAACGCTGCATGATCTG
TGTGACTGATGGGCAGGGCTCACAGATGCCCAGTAAACCACTGACCTGGACCCCAGCAAAAAAA
GCTGATTGTCTTTTAAAAAGTTATTATTTTGCCCTAAGCAAGTTGCTTTTTAATTGGGGCAGTT
AGAACACTGTTGATTTCCTAACCGCATTGTTAAGTTAGAACAGTTGGATACTGCATTTTTATCC
CTTTAAAAGAGATGATGTAACTCATCTCTGAAGGAAAGGGCCTGAGATTATAGTGAAAACTTTT
CTCCCCTTTCACTGCTGCTCTTTCATGTGTGCACTGACTAGGATATGTTCTTTTGCATGGATGT
TTTCTAACAATAAAGAGACTGACTTTA

hide sequence

RefSeq Acc Id:

XM_005331292 ⟹ XP_005331349

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024405058	24,829,962 - 24,852,513 (-)	NCBI
SpeTri2.0	NW_004936580	3,860,185 - 3,882,895 (-)	NCBI

Sequence:

show sequence

ATGATGCCGAGGAGAGGGCTGAGCGCCTCCAGCGGGAAGTTGAGGGAGAAAGGCGGGCCCGGGA
ACAGAGGTATGAAGGTTATTGAAAACCGGGCCCTAAAAGATGAAGAAAAGATGGAACTCCAGGA
AATCCAACTCAAAGAAGCTAAGCACATTGCAGAAGAAGCAGATAGGAAGTATGAAGAGGTGGCT
CGTAAGTTAGTGATTATTGAAGGAGACTTGGAACGCACAGAGGAACGAGCTGAGCTGGCAGAGT
CCCGTTGCCGAGAGATGGATGAGCAGATCAGACTGATGGACCAGAACCTGAAGTGTCTGAATGC
TGCTGAAGAAAAGTACTCTCAAAAAGAAGACAAATATGAGGAAGAAATAAAGATTCTCACTGAT
AAACTCAAGGAGGCAGAGACCCGCGCTGAGTTTGCCGAGAGATCGGTAGCCAAACTGGAAAAGA
CAATTGATGATTTGGAAGATAAGCTGAAATGCACCAAAGAGGAGCACCTCTGTACACAAAGGAT
GCTGGACCAGACTCTGCTTGACCTGAATGAGATGTAGAGCTCCCCAGTCCCGCCCTGCTGCTGC
TCCTCCCTCTGACCCTGACTCCGCCTGAGGCCAGCCAGCCCGAAGCTGACCTTGAAACTGAGGG
CTGATCTTTAACTGGAAGGCTGCTTTCTCCTTTCAACACCCCCTCAACCCCCTACCCCCTTGTC
TTTTTCACCAAACTGTCTCTGCTTCTTCCCAGAGATTCCAGCTGGGCTAGAGGCTGAGCACCTT
TGGGAACAGCATTTAAGGGAATGTGAGCACAACGCAAAGTGTCTTTAAAAGCATGTTGTGATGT
ACACATTTTGTAATTACTTTTTTTTGTTGTTACAGTAACCATTTGTAAAACATTCCAAATAATT
CCATAGCTCTGAAGCAGCAATCTAATTCCCTTCTCACTTTTGGAAGGTAACTTTCCAGCCTAAT
CCCTATTGCCCTCTCCATAGAGGAGGAAAAGAGGAATGGGCCTGCCTTACTGAGAGCCAAACAG
AGCCCAGGAAAGACTCTACTATGGCAAACCTCATTGCTCTGTGCAAAGTACTAGCCAAACCAGA
AAGGTGATTCCAAGAGGAGTTAGCCAAAAAAACAAAAACCTTGCTATTCAGGTTTTGTTTTATT
TTTAGCTTTAAGGTATCTTTAGACAACTGTATTCTTATTTTTTACTTTTTTTCATCAGAAATGA
CCAAATTAACATGGTGAGACCTCTGAGACTTTTTGTTTTTCTGGTGCTGGGGATTGAACCCAG

hide sequence

RefSeq Acc Id:

XM_013361125 ⟹ XP_013216579

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024405058	24,829,962 - 24,859,533 (-)	NCBI
SpeTri2.0	NW_004936580	3,860,185 - 3,890,058 (-)	NCBI

Sequence:

show sequence

GTTGTTGGTGGTGATGTCAGTCCATCAAAGTGTCTCACCCTGTGTTCCCCCGGGAGAATACTGA
TGGGGGTGGAGGGAGTTGGAAAGACCATATTGGGAATAAGAGGTGGAGCCCTAAGCAGAGATAA
AGGCTCAAGTCTGGGGACCCCTCCTTGCTCCTCCTTTCTTGTCCTAGTCTCTAGTTCTCCATTG
TTCACAGGTAATCCCACCAACAGCCACTGCTCATGATGGAGGCCATCAAGAAAAAAATGCAGAT
GCTGAAGTTGGACAAGGAGAACGCTCTGGACCGGGCAGAGCAGGCTGAAGCGGAGCAGAAGCAG
GCCGAGGAAAGGAGTAAGCAGCTGGAGGATGAATTAGCAGCTATGCAGAAGAAGCTGAAAGGGA
CAGAGGATGAGCTGGACAAGTATTCTGAAGCCTTAAAGGATGCCCAGGAGAAGCTGGAGCTAGC
AGAGAAGAAAGCAGCTGATGCTGAGGCTGAGGTAGCCTCCTTGAACCGAAGGATCCAACTGGTT
GAAGAGGAGCTGGACCGTGCTCAGGAGCGCCTTGCTACTGCCCTGCAAAAGCTGGAGGAAGCAG
AAAAAGCTGCTGATGAGAGTGAGAGAGGTATGAAGGTTATTGAAAACCGGGCCCTAAAAGATGA
AGAAAAGATGGAACTCCAGGAAATCCAACTCAAAGAAGCTAAGCACATTGCAGAAGAAGCAGAT
AGGAAGTATGAAGAGGTGGCTCGTAAGTTAGTGATTATTGAAGGAGACTTGGAACGCACAGAGG
AACGAGCTGAGCTGGCAGAGTCTAAGTGTTCTGAGCTGGAGGAGGAGCTGAAGAATGTCACCAA
CAACCTCAAGTCTCTTGAGGCTCAGGCGGAGAAGTACTCTCAAAAAGAAGACAAATATGAGGAA
GAAATAAAGATTCTCACTGATAAACTCAAGGAGGCAGAGACCCGCGCTGAGTTTGCCGAGAGAT
CGGTAGCCAAACTGGAAAAGACAATTGATGATTTGGAAGATGAGCTCTATGCCCAGAAACTGAA
GTACAAGGCCATTAGCGAGGAGCTGGACCACGCCCTCAATGACATGACTTCTATATAAGCTGAA
ATGCACCAAAGAGGAGCACCTCTGTACACAAAGGATGCTGGACCAGACTCTGCTTGACCTGAAT
GAGATGTAGAGCTCCCCAGTCCCGCCCTGCTGCTGCTCCTCCCTCTGACCCTGACTCCGCCTGA
GGCCAGCCAGCCCGAAGCTGACCTTGAAACTGAGGGCTGATCTTTAACTGGAAGGCTGCTTTCT
CCTTTCAACACCCCCTCAACCCCCTACCCCCTTGTCTTTTTCACCAAACTGTCTCTGCTTCTTC
CCAGAGATTCCAGCTGGGCTAGAGGCTGAGCACCTTTGGGAACAGCATTTAAGGGAATGTGAGC
ACAACGCAAAGTGTCTTTAAAAGCATGTTGTGATGTACACATTTTGTAATTACTTTTTTTTGTT
GTTACAGTAACCATTTGTAAAACATTCCAAATAATTCCATAGCTCTGAAGCAGCAATCTAATTC
CCTTCTCACTTTTGGAAGGTAACTTTCCAGCCTAATCCCTATTGCCCTCTCCATAGAGGAGGAA
AAGAGGAATGGGCCTGCCTTACTGAGAGCCAAACAGAGCCCAGGAAAGACTCTACTATGGCAAA
CCTCATTGCTCTGTGCAAAGTACTAGCCAAACCAGAAAGGTGATTCCAAGAGGAGTTAGCCAAA
AAAACAAAAACCTTGCTATTCAGGTTTTGTTTTATTTTTAGCTTTAAGGTATCTTTAGACAACT
GTATTCTTATTTTTTACTTTTTTTCATCAGAAATGACCAAATTAACATGGTGAGACCTCTGAGA
CTTTTTGTTTTTCTGGTGCTGGGGATTGAACCCAG

hide sequence

RefSeq Acc Id:

XM_013361126 ⟹ XP_013216580

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024405058	24,829,962 - 24,859,530 (-)	NCBI
SpeTri2.0	NW_004936580	3,860,185 - 3,890,057 (-)	NCBI

Sequence:

show sequence

TTGTTGGTGGTGATGTCAGTCCATCAAAGTGTCTCACCCTGTGTTCCCCCGGGAGAATACTGAT
GGGGGTGGAGGGAGTTGGAAAGACCATATTGGGAATAAGAGGTGGAGCCCTAAGCAGAGATAAA
GGCTCAAGTCTGGGGACCCCTCCTTGCTCCTCCTTTCTTGTCCTAGTCTCTAGTTCTCCATTGT
TCACAGGTAATCCCACCAACAGCCACTGCTCATGATGGAGGCCATCAAGAAAAAAATGCAGATG
CTGAAGTTGGACAAGGAGAACGCTCTGGACCGGGCAGAGCAGGCTGAAGCGGAGCAGAAGCAGG
CCGAGGAAAGGAGTAAGCAGCTGGAGGATGAATTAGCAGCTATGCAGAAGAAGCTGAAAGGGAC
AGAGGATGAGCTGGACAAGTATTCTGAAGCCTTAAAGGATGCCCAGGAGAAGCTGGAGCTAGCA
GAGAAGAAAGCAGCTGATGCTGAGGCTGAGGTAGCCTCCTTGAACCGAAGGATCCAACTGGTTG
AAGAGGAGCTGGACCGTGCTCAGGAGCGCCTTGCTACTGCCCTGCAAAAGCTGGAGGAAGCAGA
AAAAGCTGCTGATGAGAGTGAGAGAGGTATGAAGGTTATTGAAAACCGGGCCCTAAAAGATGAA
GAAAAGATGGAACTCCAGGAAATCCAACTCAAAGAAGCTAAGCACATTGCAGAAGAAGCAGATA
GGAAGTATGAAGAGGTGGCTCGTAAGTTAGTGATTATTGAAGGAGACTTGGAACGCACAGAGGA
ACGAGCTGAGCTGGCAGAGTCTAAGTGTTCTGAGCTGGAGGAGGAGCTGAAGAATGTCACCAAC
AACCTCAAGTCTCTTGAGGCTCAGGCGGAGAAGTACTCTCAAAAAGAAGACAAATATGAGGAAG
AAATAAAGATTCTCACTGATAAACTCAAGGAGGCAGAGACCCGCGCTGAGTTTGCCGAGAGATC
GGTAGCCAAACTGGAAAAGACAATTGATGATTTGGAAGATAAGCTGAAATGCACCAAAGAGGAG
CACCTCTGTACACAAAGGATGCTGGACCAGACTCTGCTTGACCTGAATGAGATGTAGAGCTCCC
CAGTCCCGCCCTGCTGCTGCTCCTCCCTCTGACCCTGACTCCGCCTGAGGCCAGCCAGCCCGAA
GCTGACCTTGAAACTGAGGGCTGATCTTTAACTGGAAGGCTGCTTTCTCCTTTCAACACCCCCT
CAACCCCCTACCCCCTTGTCTTTTTCACCAAACTGTCTCTGCTTCTTCCCAGAGATTCCAGCTG
GGCTAGAGGCTGAGCACCTTTGGGAACAGCATTTAAGGGAATGTGAGCACAACGCAAAGTGTCT
TTAAAAGCATGTTGTGATGTACACATTTTGTAATTACTTTTTTTTGTTGTTACAGTAACCATTT
GTAAAACATTCCAAATAATTCCATAGCTCTGAAGCAGCAATCTAATTCCCTTCTCACTTTTGGA
AGGTAACTTTCCAGCCTAATCCCTATTGCCCTCTCCATAGAGGAGGAAAAGAGGAATGGGCCTG
CCTTACTGAGAGCCAAACAGAGCCCAGGAAAGACTCTACTATGGCAAACCTCATTGCTCTGTGC
AAAGTACTAGCCAAACCAGAAAGGTGATTCCAAGAGGAGTTAGCCAAAAAAACAAAAACCTTGC
TATTCAGGTTTTGTTTTATTTTTAGCTTTAAGGTATCTTTAGACAACTGTATTCTTATTTTTTA
CTTTTTTTCATCAGAAATGACCAAATTAACATGGTGAGACCTCTGAGACTTTTTGTTTTTCTGG
TGCTGGGGATTGAACCCAG

hide sequence

RefSeq Acc Id:

XM_013361130 ⟹ XP_013216584

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024405058	24,831,496 - 24,852,680 (-)	NCBI
SpeTri2.0	NW_004936580	3,861,881 - 3,883,056 (-)	NCBI

Sequence:

show sequence

TATTTCAGGGCGTAGCAGGCGGAAGTAGGGGTGAGAAGCGGCTGCAGCGCCGAGAGGAGGCAGA
AGGCAGATAACGAGAAGCCGCTGGGTGGGCACCATGGCCGGGATCACCACCGTCGAGGCGGTGA
AGCGCAAGATCCAGGTTCTGCAGCAGCAAGCGGATGATGCCGAGGAGAGGGCTGAGCGCCTCCA
GCGGGAAGTTGAGGGAGAAAGGCGGGCCCGGGAACAGGCTGAGGCTGAGGTAGCCTCCTTGAAC
CGAAGGATCCAACTGGTTGAAGAGGAGCTGGACCGTGCTCAGGAGCGCCTTGCTACTGCCCTGC
AAAAGCTGGAGGAAGCAGAAAAAGCTGCTGATGAGAGTGAGAGAGGTATGAAGGTTATTGAAAA
CCGGGCCCTAAAAGATGAAGAAAAGATGGAACTCCAGGAAATCCAACTCAAAGAAGCTAAGCAC
ATTGCAGAAGAAGCAGATAGGAAGTATGAAGAGGTGGCTCGTAAGTTAGTGATTATTGAAGGAG
ACTTGGAACGCACAGAGGAACGAGCTGAGCTGGCAGAGTCCCGTTGCCGAGAGATGGATGAGCA
GATCAGACTGATGGACCAGAACCTGAAGTGTCTGAATGCTGCTGAAGAAAAGTACTCTCAAAAA
GAAGACAAATATGAGGAAGAAATAAAGATTCTCACTGATAAACTCAAGGAGGCAGAGACCCGCG
CTGAGTTTGCCGAGAGATCGGTAGCCAAACTGGAAAAGACAATTGATGATTTGGAAGATGAGCT
CTATGCCCAGAAACTGAAGTACAAGGCCATTAGCGAGGAGCTGGACCACGCCCTCAATGACATG
ACTTCTATAGCGTCTCTACAGCCAACTTGAGCGAAACCGCCTGCTTTCTAATGAGCTGAAGCTA
ACGCTGCATGATCTGTGTGACTGATGGGCAGGGCTCACAGATGCCCAGTAAACCACTGACCTGG
ACCCCAGCAAAAAAAGCTGATTGTCTTTTAAAAAGTTATTATTTTGCCCTAAGCAAGTTGCTTT
TTAATTGGGGCAGTTAGAACACTGTTGATTTCCTAACCGCATTGTTAAGTTAGAACAGTTGGAT
ACTGCATTTTTATCCCTTTAAAAGAGATGATGTAACTCATCTCTGAAGGAAAGGGCCTGAGATT
ATAGTGAAAACTTTTCTCCCCTTTCACTGCTGCTCTTTCATGTGTGCACTGACTAGGATATGTT
CTTTTGCATGGATGTTTTCTAACAATAAAGAGACTGACTTTA

hide sequence

RefSeq Acc Id:

XM_021730489 ⟹ XP_021586164

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024405058	24,831,496 - 24,859,533 (-)	NCBI
SpeTri2.0	NW_004936580	3,861,881 - 3,890,058 (-)	NCBI

Sequence:

show sequence

GTTGTTGGTGGTGATGTCAGTCCATCAAAGTGTCTCACCCTGTGTTCCCCCGGGAGAATACTGA
TGGGGGTGGAGGGAGTTGGAAAGACCATATTGGGAATAAGAGGTGGAGCCCTAAGCAGAGATAA
AGGCTCAAGTCTGGGGACCCCTCCTTGCTCCTCCTTTCTTGTCCTAGTCTCTAGTTCTCCATTG
TTCACAGGTAATCCCACCAACAGCCACTGCTCATGATGGAGGCCATCAAGAAAAAAATGCAGAT
GCTGAAGTTGGACAAGGAGAACGCTCTGGACCGGGCAGAGCAGGCTGAAGCGGAGCAGAAGCAG
GCCGAGGAAAGGAGTAAGCAGCTGGAGGATGAATTAGCAGCTATGCAGAAGAAGCTGAAAGGGA
CAGAGGATGAGCTGGACAAGTATTCTGAAGCCTTAAAGGATGCCCAGGAGAAGCTGGAGCTAGC
AGAGAAGAAAGCAGCTGATGCTGAGGCTGAGGTAGCCTCCTTGAACCGAAGGATCCAACTGGTT
GAAGAGGAGCTGGACCGTGCTCAGGAGCGCCTTGCTACTGCCCTGCAAAAGCTGGAGGAAGCAG
AAAAAGCTGCTGATGAGAGTGAGAGAGGTATGAAGGTTATTGAAAACCGGGCCCTAAAAGATGA
AGAAAAGATGGAACTCCAGGAAATCCAACTCAAAGAAGCTAAGCACATTGCAGAAGAAGCAGAT
AGGAAGTATGAAGAGGTGGCTCGTAAGTTAGTGATTATTGAAGGAGACTTGGAACGCACAGAGG
AACGAGCTGAGCTGGCAGAGTCTAAGTGTTCTGAGCTGGAGGAGGAGCTGAAGAATGTCACCAA
CAACCTCAAGTCTCTTGAGGCTCAGGCGGAGAAGTACTCTCAAAAAGAAGACAAATATGAGGAA
GAAATAAAGATTCTCACTGATAAACTCAAGGAGGCAGAGACCCGCGCTGAGTTTGCCGAGAGAT
CGGTAGCCAAACTGGAAAAGACAATTGATGATTTGGAAGATGAGCTCTATGCCCAGAAACTGAA
GTACAAGGCCATTAGCGAGGAGCTGGACCACGCCCTCAATGACATGACTTCTATAGCGTCTCTA
CAGCCAACTTGAGCGAAACCGCCTGCTTTCTAATGAGCTGAAGCTAACGCTGCATGATCTGTGT
GACTGATGGGCAGGGCTCACAGATGCCCAGTAAACCACTGACCTGGACCCCAGCAAAAAAAGCT
GATTGTCTTTTAAAAAGTTATTATTTTGCCCTAAGCAAGTTGCTTTTTAATTGGGGCAGTTAGA
ACACTGTTGATTTCCTAACCGCATTGTTAAGTTAGAACAGTTGGATACTGCATTTTTATCCCTT
TAAAAGAGATGATGTAACTCATCTCTGAAGGAAAGGGCCTGAGATTATAGTGAAAACTTTTCTC
CCCTTTCACTGCTGCTCTTTCATGTGTGCACTGACTAGGATATGTTCTTTTGCATGGATGTTTT
CTAACAATAAAGAGACTGACTTTA

hide sequence

RefSeq Acc Id:

XM_021730492 ⟹ XP_021586167

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024405058	24,831,496 - 24,859,535 (-)	NCBI
SpeTri2.0	NW_004936580	3,861,881 - 3,890,061 (-)	NCBI

Sequence:

show sequence

GTTGTTGTTGGTGGTGATGTCAGTCCATCAAAGTGTCTCACCCTGTGTTCCCCCGGGAGAATAC
TGATGGGGGTGGAGGGAGTTGGAAAGACCATATTGGGAATAAGAGGTGGAGCCCTAAGCAGAGA
TAAAGGCTCAAGTCTGGGGACCCCTCCTTGCTCCTCCTTTCTTGTCCTAGTCTCTAGTTCTCCA
TTGTTCACAGGTAATCCCACCAACAGCCACTGCTCATGATGGAGGCCATCAAGAAAAAAATGCA
GATGCTGAAGTTGGACAAGGAGAACGCTCTGGACCGGGCAGAGCAGGCTGAAGCGGAGCAGAAG
CAGGCCGAGGAAAGGAGTAAGCAGCTGGAGGATGAATTAGCAGCTATGCAGAAGAAGCTGAAAG
GGACAGAGGATGAGCTGGACAAGTATTCTGAAGCCTTAAAGGATGCCCAGGAGAAGCTGGAGCT
AGCAGAGAAGAAAGCAGCTGATGCTGAGGCTGAGGTAGCCTCCTTGAACCGAAGGATCCAACTG
GTTGAAGAGGAGCTGGACCGTGCTCAGGAGCGCCTTGCTACTGCCCTGCAAAAGCTGGAGGAAG
CAGAAAAAGCTGCTGATGAGAGTGAGAGAGGTATGAAGGTTATTGAAAACCGGGCCCTAAAAGA
TGAAGAAAAGATGGAACTCCAGGAAATCCAACTCAAAGAAGCTAAGCACATTGCAGAAGAAGCA
GATAGGAAGTATGAAGAGGTGGCTCGTAAGTTAGTGATTATTGAAGGAGACTTGGAACGCACAG
AGGAACGAGCTGAGCTGGCAGAGTCCCGTTGCCGAGAGATGGATGAGCAGATCAGACTGATGGA
CCAGAACCTGAAGTGTCTGAATGCTGCTGAAGAAAAGTACTCTCAAAAAGAAGACAAATATGAG
GAAGAAATAAAGATTCTCACTGATAAACTCAAGGAGGCAGAGACCCGCGCTGAGTTTGCCGAGA
GATCGGTAGCCAAACTGGAAAAGACAATTGATGATTTGGAAGATGAGCTCTATGCCCAGAAACT
GAAGTACAAGGCCATTAGCGAGGAGCTGGACCACGCCCTCAATGACATGACTTCTATAGCGTCT
CTACAGCCAACTTGAGCGAAACCGCCTGCTTTCTAATGAGCTGAAGCTAACGCTGCATGATCTG
TGTGACTGATGGGCAGGGCTCACAGATGCCCAGTAAACCACTGACCTGGACCCCAGCAAAAAAA
GCTGATTGTCTTTTAAAAAGTTATTATTTTGCCCTAAGCAAGTTGCTTTTTAATTGGGGCAGTT
AGAACACTGTTGATTTCCTAACCGCATTGTTAAGTTAGAACAGTTGGATACTGCATTTTTATCC
CTTTAAAAGAGATGATGTAACTCATCTCTGAAGGAAAGGGCCTGAGATTATAGTGAAAACTTTT
CTCCCCTTTCACTGCTGCTCTTTCATGTGTGCACTGACTAGGATATGTTCTTTTGCATGGATGT
TTTCTAACAATAAAGAGACTGACTTTA

hide sequence

RefSeq Acc Id:

XM_021730494 ⟹ XP_021586169

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024405058	24,831,496 - 24,852,679 (-)	NCBI
SpeTri2.0	NW_004936580	3,861,881 - 3,883,056 (-)	NCBI

Sequence:

show sequence

TATTTCAGGGCGTAGCAGGCGGAAGTAGGGGTGAGAAGCGGCTGCAGCGCCGAGAGGAGGCAGA
AGGCAGATAACGAGAAGCCGCTGGGTGGGCACCATGGCCGGGATCACCACCGTCGAGGCGGTGA
AGCGCAAGATCCAGGTTCTGCAGCAGCAAGCGGATGATGCCGAGGAGAGGGCTGAGCGCCTCCA
GCGGGAAGTTGAGGGAGAAAGGCGGGCCCGGGAACAGGCTGAGGCTGAGGTAGCCTCCTTGAAC
CGAAGGATCCAACTGGTTGAAGAGGAGCTGGACCGTGCTCAGGAGCGCCTTGCTACTGCCCTGC
AAAAGCTGGAGGAAGCAGAAAAAGCTGCTGATGAGAGTGAGAGAGGTATGAAGGTTATTGAAAA
CCGGGCCCTAAAAGATGAAGAAAAGATGGAACTCCAGGAAATCCAACTCAAAGAAGCTAAGCAC
ATTGCAGAAGAAGCAGATAGGAAGTATGAAGAGGTGGCTCGTAAGTTAGTGATTATTGAAGGAG
ACTTGGAACGCACAGAGGAACGAGCTGAGCTGGCAGAGTCTAAGTGTTCTGAGCTGGAGGAGGA
GCTGAAGAATGTCACCAACAACCTCAAGTCTCTTGAGGCTCAGGCGGAGAAGTACTCTCAAAAA
GAAGACAAATATGAGGAAGAAATAAAGATTCTCACTGATAAACTCAAGGAGGCAGAGACCCGCG
CTGAGTTTGCCGAGAGATCGGTAGCCAAACTGGAAAAGACAATTGATGATTTGGAAGATGAGCT
CTATGCCCAGAAACTGAAGTACAAGGCCATTAGCGAGGAGCTGGACCACGCCCTCAATGACATG
ACTTCTATAGCGTCTCTACAGCCAACTTGAGCGAAACCGCCTGCTTTCTAATGAGCTGAAGCTA
ACGCTGCATGATCTGTGTGACTGATGGGCAGGGCTCACAGATGCCCAGTAAACCACTGACCTGG
ACCCCAGCAAAAAAAGCTGATTGTCTTTTAAAAAGTTATTATTTTGCCCTAAGCAAGTTGCTTT
TTAATTGGGGCAGTTAGAACACTGTTGATTTCCTAACCGCATTGTTAAGTTAGAACAGTTGGAT
ACTGCATTTTTATCCCTTTAAAAGAGATGATGTAACTCATCTCTGAAGGAAAGGGCCTGAGATT
ATAGTGAAAACTTTTCTCCCCTTTCACTGCTGCTCTTTCATGTGTGCACTGACTAGGATATGTT
CTTTTGCATGGATGTTTTCTAACAATAAAGAGACTGACTTTA

hide sequence

RefSeq Acc Id:

XM_021730495 ⟹ XP_021586170

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024405058	24,829,962 - 24,852,679 (-)	NCBI
SpeTri2.0	NW_004936580	3,860,185 - 3,883,056 (-)	NCBI

Sequence:

show sequence

TATTTCAGGGCGTAGCAGGCGGAAGTAGGGGTGAGAAGCGGCTGCAGCGCCGAGAGGAGGCAGA
AGGCAGATAACGAGAAGCCGCTGGGTGGGCACCATGGCCGGGATCACCACCGTCGAGGCGGTGA
AGCGCAAGATCCAGGTTCTGCAGCAGCAAGCGGATGATGCCGAGGAGAGGGCTGAGCGCCTCCA
GCGGGAAGTTGAGGGAGAAAGGCGGGCCCGGGAACAGGCTGAGGCTGAGGTAGCCTCCTTGAAC
CGAAGGATCCAACTGGTTGAAGAGGAGCTGGACCGTGCTCAGGAGCGCCTTGCTACTGCCCTGC
AAAAGCTGGAGGAAGCAGAAAAAGCTGCTGATGAGAGTGAGAGAGGTATGAAGGTTATTGAAAA
CCGGGCCCTAAAAGATGAAGAAAAGATGGAACTCCAGGAAATCCAACTCAAAGAAGCTAAGCAC
ATTGCAGAAGAAGCAGATAGGAAGTATGAAGAGGTGGCTCGTAAGTTAGTGATTATTGAAGGAG
ACTTGGAACGCACAGAGGAACGAGCTGAGCTGGCAGAGTCTAAGTGTTCTGAGCTGGAGGAGGA
GCTGAAGAATGTCACCAACAACCTCAAGTCTCTTGAGGCTCAGGCGGAGAAGTACTCTCAAAAA
GAAGACAAATATGAGGAAGAAATAAAGATTCTCACTGATAAACTCAAGGAGGCAGAGACCCGCG
CTGAGTTTGCCGAGAGATCGGTAGCCAAACTGGAAAAGACAATTGATGATTTGGAAGATGAGCT
CTATGCCCAGAAACTGAAGTACAAGGCCATTAGCGAGGAGCTGGACCACGCCCTCAATGACATG
ACTTCTATATAAGCTGAAATGCACCAAAGAGGAGCACCTCTGTACACAAAGGATGCTGGACCAG
ACTCTGCTTGACCTGAATGAGATGTAGAGCTCCCCAGTCCCGCCCTGCTGCTGCTCCTCCCTCT
GACCCTGACTCCGCCTGAGGCCAGCCAGCCCGAAGCTGACCTTGAAACTGAGGGCTGATCTTTA
ACTGGAAGGCTGCTTTCTCCTTTCAACACCCCCTCAACCCCCTACCCCCTTGTCTTTTTCACCA
AACTGTCTCTGCTTCTTCCCAGAGATTCCAGCTGGGCTAGAGGCTGAGCACCTTTGGGAACAGC
ATTTAAGGGAATGTGAGCACAACGCAAAGTGTCTTTAAAAGCATGTTGTGATGTACACATTTTG
TAATTACTTTTTTTTGTTGTTACAGTAACCATTTGTAAAACATTCCAAATAATTCCATAGCTCT
GAAGCAGCAATCTAATTCCCTTCTCACTTTTGGAAGGTAACTTTCCAGCCTAATCCCTATTGCC
CTCTCCATAGAGGAGGAAAAGAGGAATGGGCCTGCCTTACTGAGAGCCAAACAGAGCCCAGGAA
AGACTCTACTATGGCAAACCTCATTGCTCTGTGCAAAGTACTAGCCAAACCAGAAAGGTGATTC
CAAGAGGAGTTAGCCAAAAAAACAAAAACCTTGCTATTCAGGTTTTGTTTTATTTTTAGCTTTA
AGGTATCTTTAGACAACTGTATTCTTATTTTTTACTTTTTTTCATCAGAAATGACCAAATTAAC
ATGGTGAGACCTCTGAGACTTTTTGTTTTTCTGGTGCTGGGGATTGAACCCAG

hide sequence

RefSeq Acc Id:

XM_040287600 ⟹ XP_040143534

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024405058	24,840,349 - 24,852,680 (-)	NCBI

Protein Sequences


Protein RefSeqs	XP_005331337	(Get FASTA)	NCBI Sequence Viewer
	XP_005331339	(Get FASTA)	NCBI Sequence Viewer
	XP_005331341	(Get FASTA)	NCBI Sequence Viewer
	XP_005331342	(Get FASTA)	NCBI Sequence Viewer
	XP_005331343	(Get FASTA)	NCBI Sequence Viewer
	XP_005331344	(Get FASTA)	NCBI Sequence Viewer
	XP_005331346	(Get FASTA)	NCBI Sequence Viewer
	XP_005331347	(Get FASTA)	NCBI Sequence Viewer
	XP_005331349	(Get FASTA)	NCBI Sequence Viewer
	XP_013216579	(Get FASTA)	NCBI Sequence Viewer
	XP_013216580	(Get FASTA)	NCBI Sequence Viewer
	XP_013216584	(Get FASTA)	NCBI Sequence Viewer
	XP_021586164	(Get FASTA)	NCBI Sequence Viewer
	XP_021586167	(Get FASTA)	NCBI Sequence Viewer
	XP_021586169	(Get FASTA)	NCBI Sequence Viewer
	XP_021586170	(Get FASTA)	NCBI Sequence Viewer
	XP_040143534	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSSTOP00000018908.2
	ENSSTOP00000025789.1
	ENSSTOP00000027543.1
	ENSSTOP00000031657.1
GenBank Protein	KAG3281648	(Get FASTA)	NCBI Sequence Viewer
	KAG3281649	(Get FASTA)	NCBI Sequence Viewer
	KAG3281650	(Get FASTA)	NCBI Sequence Viewer
	KAG3281651	(Get FASTA)	NCBI Sequence Viewer
	KAG3281652	(Get FASTA)	NCBI Sequence Viewer
	KAG3281653	(Get FASTA)	NCBI Sequence Viewer
	KAG3281654	(Get FASTA)	NCBI Sequence Viewer
	KAG3281655	(Get FASTA)	NCBI Sequence Viewer
	KAG3281656	(Get FASTA)	NCBI Sequence Viewer
	KAG3281657	(Get FASTA)	NCBI Sequence Viewer
	KAG3281658	(Get FASTA)	NCBI Sequence Viewer
	KAG3281659	(Get FASTA)	NCBI Sequence Viewer
	KAG3281660	(Get FASTA)	NCBI Sequence Viewer
	KAG3281661	(Get FASTA)	NCBI Sequence Viewer
	KAG3281662	(Get FASTA)	NCBI Sequence Viewer
	KAG3281663	(Get FASTA)	NCBI Sequence Viewer
	KAG3281664	(Get FASTA)	NCBI Sequence Viewer
	KAG3281665	(Get FASTA)	NCBI Sequence Viewer
	KAG3281666	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:

XP_013216580 ⟸ XM_013361126

- Peptide Label:

isoform X3

- Sequence:

show sequence

MMEAIKKKMQMLKLDKENALDRAEQAEAEQKQAEERSKQLEDELAAMQKKLKGTEDELDKYSEA
LKDAQEKLELAEKKAADAEAEVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGM
KVIENRALKDEEKMELQEIQLKEAKHIAEEADRKYEEVARKLVIIEGDLERTEERAELAESKCS
ELEEELKNVTNNLKSLEAQAEKYSQKEDKYEEEIKILTDKLKEAETRAEFAERSVAKLEKTIDD
LEDKLKCTKEEHLCTQRMLDQTLLDLNEM

hide sequence

RefSeq Acc Id:

XP_013216579 ⟸ XM_013361125

- Peptide Label:

isoform X5

- Sequence:

show sequence

MMEAIKKKMQMLKLDKENALDRAEQAEAEQKQAEERSKQLEDELAAMQKKLKGTEDELDKYSEA
LKDAQEKLELAEKKAADAEAEVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGM
KVIENRALKDEEKMELQEIQLKEAKHIAEEADRKYEEVARKLVIIEGDLERTEERAELAESKCS
ELEEELKNVTNNLKSLEAQAEKYSQKEDKYEEEIKILTDKLKEAETRAEFAERSVAKLEKTIDD
LEDELYAQKLKYKAISEELDHALNDMTSI

hide sequence

RefSeq Acc Id:	XP_005331339 ⟸ XM_005331282
- Peptide Label:	isoform X6
- UniProtKB:	I3N3G2 (UniProtKB/TrEMBL)
- Sequence:	show sequence MMEAIKKKMQMLKLDKENALDRAEQAEAEQKQAEERSKQLEDELAAMQKKLKGTEDELDKYSEA LKDAQEKLELAEKKAADAEAEVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGM KVIENRALKDEEKMELQEIQLKEAKHIAEEADRKYEEVARKLVIIEGDLERTEERAELAESRCR EMDEQIRLMDQNLKCLNAAEEKYSQKEDKYEEEIKILTDKLKEAETRAEFAERSVAKLEKTIDD LEDKLKCTKEEHLCTQRMLDQTLLDLNEM hide sequence

RefSeq Acc Id:

XP_005331344 ⟸ XM_005331287

- Peptide Label:

isoform X10

- Sequence:

show sequence

MAGITTVEAVKRKIQVLQQQADDAEERAERLQREVEGERRAREQAEAEVASLNRRIQLVEEELD
RAQERLATALQKLEEAEKAADESERGMKVIENRALKDEEKMELQEIQLKEAKHIAEEADRKYEE
VARKLVIIEGDLERTEERAELAESKCSELEEELKNVTNNLKSLEAQAEKYSQKEDKYEEEIKIL
TDKLKEAETRAEFAERSVAKLEKTIDDLEDKLKCTKEEHLCTQRMLDQTLLDLNEM

hide sequence

RefSeq Acc Id:

XP_005331342 ⟸ XM_005331285

- Peptide Label:

isoform X13

- Sequence:

show sequence

MAGITTVEAVKRKIQVLQQQADDAEERAERLQREVEGERRAREQAEAEVASLNRRIQLVEEELD
RAQERLATALQKLEEAEKAADESERGMKVIENRALKDEEKMELQEIQLKEAKHIAEEADRKYEE
VARKLVIIEGDLERTEERAELAESRCREMDEQIRLMDQNLKCLNAAEEKYSQKEDKYEEEIKIL
TDKLKEAETRAEFAERSVAKLEKTIDDLEDKLKCTKEEHLCTQRMLDQTLLDLNEM

hide sequence

RefSeq Acc Id:	XP_005331349 ⟸ XM_005331292
- Peptide Label:	isoform X17
- Sequence:	show sequence MMPRRGLSASSGKLREKGGPGNRGMKVIENRALKDEEKMELQEIQLKEAKHIAEEADRKYEEVA RKLVIIEGDLERTEERAELAESRCREMDEQIRLMDQNLKCLNAAEEKYSQKEDKYEEEIKILTD KLKEAETRAEFAERSVAKLEKTIDDLEDKLKCTKEEHLCTQRMLDQTLLDLNEM hide sequence

RefSeq Acc Id:

XP_005331341 ⟸ XM_005331284

- Peptide Label:

isoform X7

- Sequence:

show sequence

MMEAIKKKMQMLKLDKENALDRAEQAEAEQKQAEERSKQLEDELAAMQKKLKGTEDELDKYSEA
LKDAQEKLELAEKKAADAEAEVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGM
KVIENRALKDEEKMELQEIQLKEAKHIAEEADRKYEEVARKLVIIEGDLERTEERAELAESKCS
ELEEELKNVTNNLKSLEAQAEKYSQKEDKYEEEIKILTDKLKEAETRAEFAERSVAKLEKTIDD
LEERLYSQLERNRLLSNELKLTLHDLCD

hide sequence

RefSeq Acc Id:	XP_005331346 ⟸ XM_005331289
- Peptide Label:	isoform X15
- UniProtKB:	A0A287DDM7 (UniProtKB/TrEMBL)
- Sequence:	show sequence MAGITTVEAVKRKIQVLQQQADDAEERAERLQREVEGERRAREQAEAEVASLNRRIQLVEEELD RAQERLATALQKLEEAEKAADESERGMKVIENRALKDEEKMELQEIQLKEAKHIAEEADRKYEE VARKLVIIEGDLERTEERAELAESKCSELEEELKNVTNNLKSLEAQAEKYSQKEDKYEEEIKIL TDKLKEAETRAEFAERSVAKLEKTIDDLEERLYSQLERNRLLSNELKLTLHDLCD hide sequence

RefSeq Acc Id:

XP_005331347 ⟸ XM_005331290

- Peptide Label:

isoform X16

- Sequence:

show sequence

MAGITTVEAVKRKIQVLQQQADDAEERAERLQREVEGERRAREQAEAEVASLNRRIQLVEEELD
RAQERLATALQKLEEAEKAADESERGMKVIENRALKDEEKMELQEIQLKEAKHIAEEADRKYEE
VARKLVIIEGDLERTEERAELAESRCREMDEQIRLMDQNLKCLNAAEEKYSQKEDKYEEEIKIL
TDKLKEAETRAEFAERSVAKLEKTIDDLEERLYSQLERNRLLSNELKLTLHDLCD

hide sequence

RefSeq Acc Id:

XP_005331337 ⟸ XM_005331280

- Peptide Label:

isoform X4

- Sequence:

show sequence

MMEAIKKKMQMLKLDKENALDRAEQAEAEQKQAEERSKQLEDELAAMQKKLKGTEDELDKYSEA
LKDAQEKLELAEKKAADAEAEVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGM
KVIENRALKDEEKMELQEIQLKEAKHIAEEADRKYEEVARKLVIIEGDLERTEERAELAESKCS
ELEEELKNVTNNLKSLEAQAEKYSQKEDKYEEEIKILTDKLKEAETRAEFAERSVAKLEKTIDD
LEDELYAQKLKYKAISEELDHALNDMTSI

hide sequence

RefSeq Acc Id:

XP_005331343 ⟸ XM_005331286

- Peptide Label:

isoform X12

- Sequence:

show sequence

MAGITTVEAVKRKIQVLQQQADDAEERAERLQREVEGERRAREQAEAEVASLNRRIQLVEEELD
RAQERLATALQKLEEAEKAADESERGMKVIENRALKDEEKMELQEIQLKEAKHIAEEADRKYEE
VARKLVIIEGDLERTEERAELAESKCSELEEELKNVTNNLKSLEAQAEKYSQKEDKYEEEIKIL
TDKLKEAETRAEFAERSVAKLEKTIDDLEDELYAQKLKYKAISEELDHALNDMTSM

hide sequence

RefSeq Acc Id:

XP_013216584 ⟸ XM_013361130

- Peptide Label:

isoform X9

- Sequence:

show sequence

MAGITTVEAVKRKIQVLQQQADDAEERAERLQREVEGERRAREQAEAEVASLNRRIQLVEEELD
RAQERLATALQKLEEAEKAADESERGMKVIENRALKDEEKMELQEIQLKEAKHIAEEADRKYEE
VARKLVIIEGDLERTEERAELAESRCREMDEQIRLMDQNLKCLNAAEEKYSQKEDKYEEEIKIL
TDKLKEAETRAEFAERSVAKLEKTIDDLEDELYAQKLKYKAISEELDHALNDMTSIASLQPT

hide sequence

RefSeq Acc Id:	XP_021586170 ⟸ XM_021730495
- Peptide Label:	isoform X11
- UniProtKB:	A0A287CX05 (UniProtKB/TrEMBL)
- Sequence:	show sequence MAGITTVEAVKRKIQVLQQQADDAEERAERLQREVEGERRAREQAEAEVASLNRRIQLVEEELD RAQERLATALQKLEEAEKAADESERGMKVIENRALKDEEKMELQEIQLKEAKHIAEEADRKYEE VARKLVIIEGDLERTEERAELAESKCSELEEELKNVTNNLKSLEAQAEKYSQKEDKYEEEIKIL TDKLKEAETRAEFAERSVAKLEKTIDDLEDELYAQKLKYKAISEELDHALNDMTSI hide sequence

RefSeq Acc Id:

XP_021586167 ⟸ XM_021730492

- Peptide Label:

isoform X2

- Sequence:

show sequence

MMEAIKKKMQMLKLDKENALDRAEQAEAEQKQAEERSKQLEDELAAMQKKLKGTEDELDKYSEA
LKDAQEKLELAEKKAADAEAEVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGM
KVIENRALKDEEKMELQEIQLKEAKHIAEEADRKYEEVARKLVIIEGDLERTEERAELAESRCR
EMDEQIRLMDQNLKCLNAAEEKYSQKEDKYEEEIKILTDKLKEAETRAEFAERSVAKLEKTIDD
LEDELYAQKLKYKAISEELDHALNDMTSIASLQPT

hide sequence

RefSeq Acc Id:

XP_021586164 ⟸ XM_021730489

- Peptide Label:

isoform X1

- Sequence:

show sequence

MMEAIKKKMQMLKLDKENALDRAEQAEAEQKQAEERSKQLEDELAAMQKKLKGTEDELDKYSEA
LKDAQEKLELAEKKAADAEAEVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGM
KVIENRALKDEEKMELQEIQLKEAKHIAEEADRKYEEVARKLVIIEGDLERTEERAELAESKCS
ELEEELKNVTNNLKSLEAQAEKYSQKEDKYEEEIKILTDKLKEAETRAEFAERSVAKLEKTIDD
LEDELYAQKLKYKAISEELDHALNDMTSIASLQPT

hide sequence

RefSeq Acc Id:

XP_021586169 ⟸ XM_021730494

- Peptide Label:

isoform X8

- Sequence:

show sequence

MAGITTVEAVKRKIQVLQQQADDAEERAERLQREVEGERRAREQAEAEVASLNRRIQLVEEELD
RAQERLATALQKLEEAEKAADESERGMKVIENRALKDEEKMELQEIQLKEAKHIAEEADRKYEE
VARKLVIIEGDLERTEERAELAESKCSELEEELKNVTNNLKSLEAQAEKYSQKEDKYEEEIKIL
TDKLKEAETRAEFAERSVAKLEKTIDDLEDELYAQKLKYKAISEELDHALNDMTSIASLQPT

hide sequence

RefSeq Acc Id:	XP_040143534 ⟸ XM_040287600
- Peptide Label:	isoform X14

RefSeq Acc Id:

ENSSTOP00000027543 ⟸ ENSSTOT00000033705

RefSeq Acc Id:

ENSSTOP00000018908 ⟸ ENSSTOT00000023433

RefSeq Acc Id:

ENSSTOP00000031657 ⟸ ENSSTOT00000039883

RefSeq Acc Id:

ENSSTOP00000025789 ⟸ ENSSTOT00000032762

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSSTOG00000023525	Ensembl, UniProtKB/TrEMBL
Ensembl Transcript	ENSSTOT00000023433.2	UniProtKB/TrEMBL
	ENSSTOT00000032762.1	UniProtKB/TrEMBL
	ENSSTOT00000033705.1	UniProtKB/TrEMBL
	ENSSTOT00000039883.1	UniProtKB/TrEMBL
Gene3D-CATH	1.20.5.170	UniProtKB/TrEMBL
	1.20.5.340	UniProtKB/TrEMBL
	1.20.5.370	UniProtKB/TrEMBL
InterPro	Tropomyosin	UniProtKB/TrEMBL
	XRCC4-like_C	UniProtKB/TrEMBL
NCBI Gene	Tpm3	ENTREZGENE
PANTHER	TROPOMYOSIN	UniProtKB/TrEMBL
	TROPOMYOSIN 3, RELATED SEQUENCE 7	UniProtKB/TrEMBL
	TROPOMYOSIN ALPHA-3 CHAIN	UniProtKB/TrEMBL
Pfam	Tropomyosin	UniProtKB/TrEMBL
PRINTS	TROPOMYOSIN	UniProtKB/TrEMBL
PROSITE	TROPOMYOSIN	UniProtKB/TrEMBL
Superfamily-SCOP	Tropomyosin	UniProtKB/TrEMBL
UniProt	A0A287CX05	ENTREZGENE, UniProtKB/TrEMBL
	A0A287D1W0_ICTTR	UniProtKB/TrEMBL
	A0A287DDM7	ENTREZGENE, UniProtKB/TrEMBL
	I3N3G2	ENTREZGENE, UniProtKB/TrEMBL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

Imported Disease Annotations - OMIM

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Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

Imported Disease Annotations - OMIM