Mef2c (myocyte enhancer factor 2C) - Rat Genome Database

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Gene: Mef2c (myocyte enhancer factor 2C) Ictidomys tridecemlineatus
Analyze
Symbol: Mef2c
Name: myocyte enhancer factor 2C
RGD ID: 12609170
Description: ENCODES a protein that exhibits chromatin binding (ortholog); cis-regulatory region sequence-specific DNA binding (ortholog); DNA binding (ortholog); INVOLVED IN B cell homeostasis (ortholog); B cell proliferation (ortholog); B cell receptor signaling pathway (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); autistic disorder (ortholog); autosomal dominant mental retardation 20 (ortholog); FOUND IN cytoplasm (ortholog); intracellular membrane-bounded organelle (ortholog); nuclear speck (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Also known as: myocyte enhancer factor 2C, transcript variant X1; myocyte enhancer factor 2C, transcript variant X10; myocyte enhancer factor 2C, transcript variant X11; myocyte enhancer factor 2C, transcript variant X12; myocyte enhancer factor 2C, transcript variant X13; myocyte enhancer factor 2C, transcript variant X14; myocyte enhancer factor 2C, transcript variant X15; myocyte enhancer factor 2C, transcript variant X16; myocyte enhancer factor 2C, transcript variant X17; myocyte enhancer factor 2C, transcript variant X18; myocyte enhancer factor 2C, transcript variant X19; myocyte enhancer factor 2C, transcript variant X2; myocyte enhancer factor 2C, transcript variant X3; myocyte enhancer factor 2C, transcript variant X4; myocyte enhancer factor 2C, transcript variant X5; myocyte enhancer factor 2C, transcript variant X6; myocyte enhancer factor 2C, transcript variant X7; myocyte enhancer factor 2C, transcript variant X8; myocyte enhancer factor 2C, transcript variant X9; myocyte-specific enhancer factor 2C
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: SpeTri2.0 - Squirrel SpeTri2.0 Assembly
Position:
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024407213175,400,303 - 175,565,279 (+)NCBI
SpeTri2.0NW_0049364697,060,480 - 7,225,497 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process
B cell homeostasis  (ISO)
B cell proliferation  (ISO)
B cell receptor signaling pathway  (ISO)
blood vessel development  (ISO)
blood vessel remodeling  (ISO)
cardiac muscle cell differentiation  (ISO)
cardiac muscle hypertrophy in response to stress  (ISO)
cardiac ventricle formation  (ISO)
cartilage morphogenesis  (ISO)
cell fate commitment  (ISO)
cell morphogenesis involved in neuron differentiation  (ISO)
cellular response to calcium ion  (ISO)
cellular response to fluid shear stress  (ISO)
cellular response to glucose stimulus  (ISO)
cellular response to growth factor stimulus  (ISO)
cellular response to lipopolysaccharide  (ISO)
cellular response to organic cyclic compound  (ISO)
cellular response to parathyroid hormone stimulus  (ISO)
cellular response to retinoic acid  (ISO)
cellular response to transforming growth factor beta stimulus  (ISO)
cellular response to trichostatin A  (ISO)
cellular response to xenobiotic stimulus  (ISO)
chondrocyte differentiation  (ISO)
dentate gyrus development  (ISO)
embryonic heart tube development  (ISO)
embryonic skeletal system morphogenesis  (ISO)
embryonic viscerocranium morphogenesis  (ISO)
endochondral ossification  (ISO)
epithelial cell proliferation involved in renal tubule morphogenesis  (ISO)
excitatory postsynaptic potential  (ISO)
gene expression  (ISO)
germinal center formation  (ISO)
glomerulus morphogenesis  (ISO)
heart development  (ISO)
heart looping  (ISO)
humoral immune response  (ISO)
learning or memory  (ISO)
MAPK cascade  (ISO)
melanocyte differentiation  (ISO)
monocyte differentiation  (ISO)
muscle cell fate determination  (ISO)
myotube differentiation  (ISO)
negative regulation of blood vessel endothelial cell migration  (ISO)
negative regulation of epithelial cell proliferation  (ISO)
negative regulation of gene expression  (ISO)
negative regulation of neuron apoptotic process  (ISO)
negative regulation of ossification  (ISO)
negative regulation of transcription by RNA polymerase II  (ISO)
negative regulation of vascular associated smooth muscle cell migration  (ISO)
negative regulation of vascular associated smooth muscle cell proliferation  (ISO)
negative regulation of vascular endothelial cell proliferation  (ISO)
nephron tubule epithelial cell differentiation  (ISO)
neural crest cell differentiation  (ISO)
neuron development  (ISO)
neuron differentiation  (ISO)
neuron migration  (ISO)
osteoblast differentiation  (ISO)
outflow tract morphogenesis  (ISO)
platelet formation  (ISO)
positive regulation of alkaline phosphatase activity  (ISO)
positive regulation of B cell proliferation  (ISO)
positive regulation of behavioral fear response  (ISO)
positive regulation of bone mineralization  (ISO)
positive regulation of cardiac muscle cell differentiation  (ISO)
positive regulation of cardiac muscle cell proliferation  (ISO)
positive regulation of cardiac muscle hypertrophy  (ISO)
positive regulation of cell proliferation in bone marrow  (ISO)
positive regulation of gene expression  (ISO)
positive regulation of macrophage apoptotic process  (ISO)
positive regulation of myoblast differentiation  (ISO)
positive regulation of neuron differentiation  (ISO)
positive regulation of osteoblast differentiation  (ISO)
positive regulation of skeletal muscle cell differentiation  (ISO)
positive regulation of skeletal muscle tissue development  (ISO)
positive regulation of transcription by RNA polymerase II  (ISO)
positive regulation of transcription, DNA-templated  (ISO)
primary heart field specification  (ISO)
regulation of AMPA receptor activity  (ISO)
regulation of dendritic spine development  (ISO)
regulation of germinal center formation  (ISO)
regulation of megakaryocyte differentiation  (ISO)
regulation of neuron apoptotic process  (ISO)
regulation of neurotransmitter secretion  (ISO)
regulation of NMDA receptor activity  (ISO)
regulation of sarcomere organization  (ISO)
regulation of synapse assembly  (ISO)
regulation of synaptic activity  (ISO)
regulation of synaptic plasticity  (ISO)
regulation of synaptic transmission, glutamatergic  (ISO)
regulation of transcription, DNA-templated  (ISO)
renal tubule morphogenesis  (ISO)
response to nutrient levels  (ISO)
response to vitamin E  (ISO)
roof of mouth development  (ISO)
secondary heart field specification  (ISO)
semaphorin-plexin signaling pathway involved in axon guidance  (ISO)
sinoatrial valve morphogenesis  (ISO)
skeletal muscle cell differentiation  (ISO)
skeletal muscle tissue development  (ISO)
smooth muscle cell differentiation  (ISO)
sympathetic neuron axon guidance  (ISO)
transdifferentiation  (ISO)
ventricular cardiac muscle cell differentiation  (ISO)

Cellular Component

References
Additional References at PubMed
PMID:20617369   PMID:22513076  


Genomics

Comparative Map Data
Mef2c
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024407213175,400,303 - 175,565,279 (+)NCBI
SpeTri2.0NW_0049364697,060,480 - 7,225,497 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
MEF2C
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl588,717,117 - 88,904,257 (-)EnsemblGRCh38hg38GRCh38
GRCh38588,717,117 - 88,904,105 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh37588,012,934 - 88,199,922 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36588,051,922 - 88,214,780 (-)NCBINCBI36hg18NCBI36
Build 34588,051,921 - 88,214,780NCBI
Celera583,907,023 - 84,092,551 (-)NCBI
Cytogenetic Map5q14.3NCBI
HuRef583,218,989 - 83,404,187 (-)NCBIHuRef
CHM1_1587,447,103 - 87,632,656 (-)NCBICHM1_1
Mef2c
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391383,652,136 - 83,815,198 (+)NCBIGRCm39mm39
GRCm39 Ensembl1383,652,153 - 83,815,199 (+)Ensembl
GRCm381383,504,017 - 83,667,079 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1383,504,034 - 83,667,080 (+)EnsemblGRCm38mm10GRCm38
MGSCv371383,643,033 - 83,806,684 (+)NCBIGRCm37mm9NCBIm37
MGSCv361383,981,532 - 84,141,286 (+)NCBImm8
Celera1385,760,645 - 85,921,930 (+)NCBICelera
Cytogenetic Map13C3NCBI
cM Map1343.68NCBI
Mef2c
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.2213,973,299 - 14,136,065 (+)NCBImRatBN7.2
Rnor_6.0 Ensembl211,658,568 - 11,822,787 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.0211,658,534 - 11,822,788 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0211,521,053 - 11,684,949 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4212,331,078 - 12,346,520 (-)NCBIRGSC3.4rn4RGSC3.4
Celera210,288,159 - 10,449,731 (+)NCBICelera
Cytogenetic Map2q11NCBI
Mef2c
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495541822,537,285 - 22,701,434 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495541822,537,388 - 22,701,434 (+)NCBIChiLan1.0ChiLan1.0
MEF2C
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.1526,620,837 - 26,786,426 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl526,681,700 - 26,786,426 (+)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v0526,480,489 - 26,650,813 (+)NCBIMhudiblu_PPA_v0panPan3
MEF2C
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1319,778,997 - 19,948,203 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl319,779,007 - 19,943,852 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha321,145,574 - 21,314,826 (+)NCBI
ROS_Cfam_1.0319,687,661 - 19,856,893 (+)NCBI
UMICH_Zoey_3.1319,665,907 - 19,834,881 (+)NCBI
UNSW_CanFamBas_1.0319,629,618 - 19,798,838 (+)NCBI
UU_Cfam_GSD_1.0319,916,077 - 20,085,117 (+)NCBI
MEF2C
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl296,122,407 - 96,296,842 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1296,122,407 - 96,296,927 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2298,794,388 - 98,885,272 (-)NCBISscrofa10.2Sscrofa10.2susScr3
MEF2C
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1482,702,378 - 82,887,491 (-)NCBI
ChlSab1.1 Ensembl482,706,738 - 82,788,152 (-)Ensembl
Vero_WHO_p1.0NW_02366604931,746,488 - 31,916,073 (-)NCBI
Mef2c
(Heterocephalus glaber - naked mole-rat)
Naked Mole-rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046247438,072,871 - 8,235,174 (-)NCBI


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts XM_013363609 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_013363705 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_013363828 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_013363846 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_013363873 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021725809 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021725838 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021725881 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021725911 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021725949 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021725990 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021726030 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021726066 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021726096 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021726120 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021726217 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021726246 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021726263 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021726301 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_040273508 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_040273510 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_040273511 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_040273512 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_040273513 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_040273514 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_040273515 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_040273516 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_040273517 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_040273518 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_040273519 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_040273520 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_040273521 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide GU434272 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAESOR010002273 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: XM_013363609   ⟹   XP_013219063
RefSeq Status:
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_024407213175,421,321 - 175,565,279 (+)NCBI
SpeTri2.0NW_0049364697,060,480 - 7,204,409 (-)NCBI
Sequence:
RefSeq Acc Id: XM_013363705   ⟹   XP_013219159
RefSeq Status:
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
SpeTri2.0NW_0049364697,060,480 - 7,204,410 (-)NCBI
Sequence:
RefSeq Acc Id: XM_013363828   ⟹   XP_013219282
RefSeq Status:
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_024407213175,421,323 - 175,565,279 (+)NCBI
SpeTri2.0NW_0049364697,060,480 - 7,204,408 (-)NCBI
Sequence:
RefSeq Acc Id: XM_013363846   ⟹   XP_013219300
RefSeq Status:
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
SpeTri2.0NW_0049364697,060,480 - 7,204,410 (-)NCBI
Sequence:
RefSeq Acc Id: XM_013363873   ⟹   XP_013219327
RefSeq Status:
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
SpeTri2.0NW_0049364697,060,480 - 7,204,411 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021725809   ⟹   XP_021581484
RefSeq Status:
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_024407213175,421,324 - 175,565,279 (+)NCBI
SpeTri2.0NW_0049364697,060,480 - 7,204,647 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021725838   ⟹   XP_021581513
RefSeq Status:
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_024407213175,421,324 - 175,565,279 (+)NCBI
SpeTri2.0NW_0049364697,060,480 - 7,204,647 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021725881   ⟹   XP_021581556
RefSeq Status:
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
SpeTri2.0NW_0049364697,060,480 - 7,154,346 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021725911   ⟹   XP_021581586
RefSeq Status:
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
SpeTri2.0NW_0049364697,060,480 - 7,154,346 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021725949   ⟹   XP_021581624
RefSeq Status:
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_024407213175,400,303 - 175,565,279 (+)NCBI
SpeTri2.0NW_0049364697,060,480 - 7,208,840 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021725990   ⟹   XP_021581665
RefSeq Status:
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_024407213175,470,350 - 175,565,279 (+)NCBI
SpeTri2.0NW_0049364697,060,480 - 7,155,455 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021726030   ⟹   XP_021581705
RefSeq Status:
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_024407213175,400,303 - 175,565,279 (+)NCBI
SpeTri2.0NW_0049364697,060,480 - 7,208,788 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021726066   ⟹   XP_021581741
RefSeq Status:
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_024407213175,470,357 - 175,565,279 (+)NCBI
SpeTri2.0NW_0049364697,060,480 - 7,155,455 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021726096   ⟹   XP_021581771
RefSeq Status:
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
SpeTri2.0NW_0049364697,060,480 - 7,204,411 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021726120   ⟹   XP_021581795
RefSeq Status:
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
SpeTri2.0NW_0049364697,060,480 - 7,204,409 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021726217   ⟹   XP_021581892
RefSeq Status:
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
SpeTri2.0NW_0049364697,060,480 - 7,225,497 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021726246   ⟹   XP_021581921
RefSeq Status:
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
SpeTri2.0NW_0049364697,060,480 - 7,204,409 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021726263   ⟹   XP_021581938
RefSeq Status:
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
SpeTri2.0NW_0049364697,060,480 - 7,204,411 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021726301   ⟹   XP_021581976
RefSeq Status:
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_024407213175,421,325 - 175,565,279 (+)NCBI
SpeTri2.0NW_0049364697,060,480 - 7,204,408 (-)NCBI
Sequence:
RefSeq Acc Id: XM_040273508   ⟹   XP_040129442
RefSeq Status:
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_024407213175,415,132 - 175,565,279 (+)NCBI
RefSeq Acc Id: XM_040273510   ⟹   XP_040129444
RefSeq Status:
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_024407213175,415,132 - 175,565,279 (+)NCBI
RefSeq Acc Id: XM_040273511   ⟹   XP_040129445
RefSeq Status:
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_024407213175,421,324 - 175,565,279 (+)NCBI
RefSeq Acc Id: XM_040273512   ⟹   XP_040129446
RefSeq Status:
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_024407213175,421,320 - 175,565,279 (+)NCBI
RefSeq Acc Id: XM_040273513   ⟹   XP_040129447
RefSeq Status:
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_024407213175,421,321 - 175,565,279 (+)NCBI
RefSeq Acc Id: XM_040273514   ⟹   XP_040129448
RefSeq Status:
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_024407213175,421,321 - 175,565,279 (+)NCBI
RefSeq Acc Id: XM_040273515   ⟹   XP_040129449
RefSeq Status:
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_024407213175,421,319 - 175,565,279 (+)NCBI
RefSeq Acc Id: XM_040273516   ⟹   XP_040129450
RefSeq Status:
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_024407213175,421,325 - 175,565,279 (+)NCBI
RefSeq Acc Id: XM_040273517   ⟹   XP_040129451
RefSeq Status:
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_024407213175,415,132 - 175,565,279 (+)NCBI
RefSeq Acc Id: XM_040273518   ⟹   XP_040129452
RefSeq Status:
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_024407213175,421,323 - 175,565,279 (+)NCBI
RefSeq Acc Id: XM_040273519   ⟹   XP_040129453
RefSeq Status:
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_024407213175,470,335 - 175,565,279 (+)NCBI
RefSeq Acc Id: XM_040273520   ⟹   XP_040129454
RefSeq Status:
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_024407213175,470,335 - 175,565,279 (+)NCBI
RefSeq Acc Id: XM_040273521   ⟹   XP_040129455
RefSeq Status:
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_024407213175,421,111 - 175,565,279 (+)NCBI
Protein Sequences
Protein RefSeqs XP_013219063 (Get FASTA)   NCBI Sequence Viewer  
  XP_013219282 (Get FASTA)   NCBI Sequence Viewer  
  XP_021581484 (Get FASTA)   NCBI Sequence Viewer  
  XP_021581513 (Get FASTA)   NCBI Sequence Viewer  
  XP_021581624 (Get FASTA)   NCBI Sequence Viewer  
  XP_021581665 (Get FASTA)   NCBI Sequence Viewer  
  XP_021581705 (Get FASTA)   NCBI Sequence Viewer  
  XP_021581741 (Get FASTA)   NCBI Sequence Viewer  
  XP_021581976 (Get FASTA)   NCBI Sequence Viewer  
  XP_040129442 (Get FASTA)   NCBI Sequence Viewer  
  XP_040129444 (Get FASTA)   NCBI Sequence Viewer  
  XP_040129445 (Get FASTA)   NCBI Sequence Viewer  
  XP_040129446 (Get FASTA)   NCBI Sequence Viewer  
  XP_040129447 (Get FASTA)   NCBI Sequence Viewer  
  XP_040129448 (Get FASTA)   NCBI Sequence Viewer  
  XP_040129449 (Get FASTA)   NCBI Sequence Viewer  
  XP_040129450 (Get FASTA)   NCBI Sequence Viewer  
  XP_040129451 (Get FASTA)   NCBI Sequence Viewer  
  XP_040129452 (Get FASTA)   NCBI Sequence Viewer  
  XP_040129453 (Get FASTA)   NCBI Sequence Viewer  
  XP_040129454 (Get FASTA)   NCBI Sequence Viewer  
  XP_040129455 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein ADD21633 (Get FASTA)   NCBI Sequence Viewer  
  KAG3266377 (Get FASTA)   NCBI Sequence Viewer  
  KAG3266378 (Get FASTA)   NCBI Sequence Viewer  
  KAG3266379 (Get FASTA)   NCBI Sequence Viewer  
  KAG3266380 (Get FASTA)   NCBI Sequence Viewer  
  KAG3266381 (Get FASTA)   NCBI Sequence Viewer  
  KAG3266382 (Get FASTA)   NCBI Sequence Viewer  
  KAG3266383 (Get FASTA)   NCBI Sequence Viewer  
  KAG3266384 (Get FASTA)   NCBI Sequence Viewer  
  KAG3266385 (Get FASTA)   NCBI Sequence Viewer  
  KAG3266386 (Get FASTA)   NCBI Sequence Viewer  
  KAG3266387 (Get FASTA)   NCBI Sequence Viewer  
  KAG3266388 (Get FASTA)   NCBI Sequence Viewer  
  KAG3266389 (Get FASTA)   NCBI Sequence Viewer  
  KAG3266390 (Get FASTA)   NCBI Sequence Viewer  
  KAG3266391 (Get FASTA)   NCBI Sequence Viewer  
  KAG3266392 (Get FASTA)   NCBI Sequence Viewer  
  KAG3266393 (Get FASTA)   NCBI Sequence Viewer  
  KAG3266394 (Get FASTA)   NCBI Sequence Viewer  
  KAG3266395 (Get FASTA)   NCBI Sequence Viewer  
Reference Sequences
RefSeq Acc Id: XP_013219063   ⟸   XM_013363609
- Peptide Label: isoform X3
- UniProtKB: A0A287D797 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_013219300   ⟸   XM_013363846
- Peptide Label: isoform X10
- Sequence:
RefSeq Acc Id: XP_013219159   ⟸   XM_013363705
- Peptide Label: isoform X5
- Sequence:
RefSeq Acc Id: XP_013219327   ⟸   XM_013363873
- Peptide Label: isoform X11
- Sequence:
RefSeq Acc Id: XP_013219282   ⟸   XM_013363828
- Peptide Label: isoform X7
- Sequence:
RefSeq Acc Id: XP_021581892   ⟸   XM_021726217
- Peptide Label: isoform X5
- Sequence:
RefSeq Acc Id: XP_021581624   ⟸   XM_021725949
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_021581705   ⟸   XM_021726030
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_021581484   ⟸   XM_021725809
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_021581513   ⟸   XM_021725838
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_021581938   ⟸   XM_021726263
- Peptide Label: isoform X7
- Sequence:
RefSeq Acc Id: XP_021581771   ⟸   XM_021726096
- Peptide Label: isoform X2
- Sequence:
RefSeq Acc Id: XP_021581795   ⟸   XM_021726120
- Peptide Label: isoform X3
- Sequence:
RefSeq Acc Id: XP_021581921   ⟸   XM_021726246
- Peptide Label: isoform X6
- Sequence:
RefSeq Acc Id: XP_021581976   ⟸   XM_021726301
- Peptide Label: isoform X6
- Sequence:
RefSeq Acc Id: XP_021581665   ⟸   XM_021725990
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_021581741   ⟸   XM_021726066
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_021581556   ⟸   XM_021725881
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_021581586   ⟸   XM_021725911
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_040129442   ⟸   XM_040273508
- Peptide Label: isoform X1
RefSeq Acc Id: XP_040129444   ⟸   XM_040273510
- Peptide Label: isoform X1
RefSeq Acc Id: XP_040129451   ⟸   XM_040273517
- Peptide Label: isoform X6
RefSeq Acc Id: XP_040129455   ⟸   XM_040273521
- Peptide Label: isoform X8
RefSeq Acc Id: XP_040129449   ⟸   XM_040273515
- Peptide Label: isoform X5
RefSeq Acc Id: XP_040129446   ⟸   XM_040273512
- Peptide Label: isoform X2
RefSeq Acc Id: XP_040129447   ⟸   XM_040273513
- Peptide Label: isoform X3
RefSeq Acc Id: XP_040129448   ⟸   XM_040273514
- Peptide Label: isoform X4
RefSeq Acc Id: XP_040129452   ⟸   XM_040273518
- Peptide Label: isoform X7
RefSeq Acc Id: XP_040129445   ⟸   XM_040273511
- Peptide Label: isoform X1
RefSeq Acc Id: XP_040129450   ⟸   XM_040273516
- Peptide Label: isoform X6
RefSeq Acc Id: XP_040129454   ⟸   XM_040273520
- Peptide Label: isoform X7
RefSeq Acc Id: XP_040129453   ⟸   XM_040273519
- Peptide Label: isoform X7
Protein Domains
MADS-box


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSSTOG00000001883 ENTREZGENE
Ensembl Protein ENSSTOP00000001678 ENTREZGENE
  ENSSTOP00000029409 ENTREZGENE
NCBI Gene Mef2c ENTREZGENE
UniProt A0A287D797 ENTREZGENE