Apln (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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HiC_Itri_2 | X | 99,087,672 - 99,097,573 (-) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936479 | 1,890,229 - 1,899,730 (+) | Ensembl | SpeTri2.0 | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936479 | 1,889,930 - 1,899,811 (+) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
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APLN (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCh38 | X | 129,645,259 - 129,654,956 (-) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | X | 129,645,259 - 129,654,956 (-) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | X | 128,779,236 - 128,788,933 (-) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | X | 128,607,006 - 128,616,595 (-) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Build 34 | X | 128,504,860 - 128,514,449 | NCBI | | | | | Celera | X | 129,165,798 - 129,175,495 (-) | NCBI | | Celera | | | Cytogenetic Map | X | q26.1 | NCBI | | | | | HuRef | X | 118,183,705 - 118,187,243 (-) | NCBI | | HuRef | | | CHM1_1 | X | 128,690,603 - 128,700,300 (-) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | X | 127,964,047 - 127,973,744 (-) | NCBI | | T2T-CHM13v2.0 | | |
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Apln (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCm39 | X | 47,114,023 - 47,123,730 (-) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | X | 47,114,023 - 47,123,730 (-) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | X | 48,025,146 - 48,034,853 (-) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | X | 48,025,146 - 48,034,853 (-) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | X | 45,378,323 - 45,388,029 (-) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | X | 44,269,773 - 44,279,461 (-) | NCBI | | MGSCv36 | mm8 | | Celera | X | 35,527,952 - 35,537,661 (-) | NCBI | | Celera | | | Cytogenetic Map | X | A4 | NCBI | | | | | cM Map | X | 25.48 | NCBI | | | | |
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Apln (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCr8 | X | 132,058,739 - 132,091,518 (-) | NCBI | | GRCr8 | | | mRatBN7.2 | X | 127,180,801 - 127,213,567 (-) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | X | 127,203,823 - 127,213,391 (-) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | X | 129,330,091 - 129,339,567 (-) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | X | 132,900,432 - 132,909,910 (-) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | X | 130,427,238 - 130,436,715 (-) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | X | 134,856,719 - 134,866,210 (-) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | X | 134,856,726 - 134,866,210 (-) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | X | 134,929,116 - 134,938,607 (-) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | X | 134,387,285 - 134,396,762 (-) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | RGSC_v3.1 | X | 134,460,719 - 134,470,195 (-) | NCBI | | | | | Celera | X | 126,154,452 - 126,163,943 (-) | NCBI | | Celera | | | Cytogenetic Map | X | q36 | NCBI | | | | |
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Apln (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChiLan1.0 Ensembl | NW_004955473 | 5,346,747 - 5,356,359 (+) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955473 | 5,346,822 - 5,356,359 (+) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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APLN (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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NHGRI_mPanPan1-v2 | X | 129,068,533 - 129,078,279 (-) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | X | 129,072,147 - 129,081,892 (-) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | X | 118,775,509 - 118,785,224 (-) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | X | 129,073,135 - 129,082,484 (-) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | |
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APLN (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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CanFam3.1 | X | 100,863,360 - 100,873,105 (-) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | X | 87,037,314 - 87,047,056 (-) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | X | 102,715,584 - 102,725,338 (-) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | X | 102,716,128 - 102,725,606 (-) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | X | 100,133,401 - 100,143,158 (-) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | X | 101,979,328 - 101,989,085 (-) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | X | 101,757,148 - 101,766,893 (-) | NCBI | | UU_Cfam_GSD_1.0 | | |
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APLN (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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Sscrofa11.1 Ensembl | X | 106,236,749 - 106,246,377 (-) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | X | 106,236,746 - 106,246,563 (-) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | X | 122,005,684 - 122,015,536 (-) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
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APLN (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChlSab1.1 | X | 104,885,639 - 104,896,371 (-) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | X | 104,888,996 - 104,895,014 (-) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666065 | 42,370,529 - 42,380,294 (-) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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Apln (Heterocephalus glaber - naked mole-rat) |
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