Bod1 (biorientation of chromosomes in cell division 1) - Rat Genome Database

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Gene: Bod1 (biorientation of chromosomes in cell division 1) Ictidomys tridecemlineatus
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Symbol: Bod1
Name: biorientation of chromosomes in cell division 1
RGD ID: 12604561
Description: ENCODES a protein that exhibits protein phosphatase 2A binding (ortholog); protein phosphatase inhibitor activity (ortholog); INVOLVED IN mitotic metaphase plate congression (ortholog); mitotic sister chromatid biorientation (ortholog); mitotic sister chromatid cohesion, centromeric (ortholog); ASSOCIATED WITH intellectual disability (ortholog); FOUND IN centrosome (ortholog); outer kinetochore (ortholog); spindle microtubule (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Also known as: biorientation of chromosomes in cell division protein 1
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: SpeTri2.0 - Squirrel SpeTri2.0 Assembly
NCBI Annotation Information: Annotation category: partial on reference assembly
Position:
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440721393,357,695 - 93,425,351 (+)NCBI
SpeTri2.0NW_0049366092,034,271 - 2,096,274 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References

Genomics

Comparative Map Data
Bod1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440721393,357,695 - 93,425,351 (+)NCBI
SpeTri2.0NW_0049366092,034,271 - 2,096,274 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
BOD1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl5173,607,145 - 173,616,659 (-)EnsemblGRCh38hg38GRCh38
GRCh385173,607,145 - 173,617,072 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh375173,034,148 - 173,043,653 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 365172,967,146 - 172,976,262 (-)NCBINCBI36hg18NCBI36
Build 345172,967,149 - 172,976,262NCBI
Celera5169,066,406 - 169,075,924 (-)NCBI
Cytogenetic Map5q35.2NCBI
HuRef5168,129,859 - 168,139,374 (-)NCBIHuRef
CHM1_15172,466,671 - 172,476,189 (-)NCBICHM1_1
Bod1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391131,615,150 - 31,621,862 (-)NCBIGRCm39mm39
GRCm39 Ensembl1131,615,181 - 31,621,885 (-)Ensembl
GRCm381131,665,150 - 31,671,862 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1131,665,181 - 31,671,885 (-)EnsemblGRCm38mm10GRCm38
MGSCv371131,565,150 - 31,571,862 (-)NCBIGRCm37mm9NCBIm37
MGSCv361131,565,150 - 31,571,862 (-)NCBImm8
Celera1134,080,907 - 34,087,599 (-)NCBICelera
Cytogenetic Map11A4NCBI
cM Map1118.55NCBI
Bod1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.21015,993,454 - 15,999,795 (+)NCBImRatBN7.2
mRatBN7.2 Ensembl1015,993,454 - 15,999,787 (+)Ensembl
Rnor_6.01016,259,728 - 16,266,069 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1016,259,728 - 16,266,061 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01016,152,118 - 16,158,459 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41016,255,404 - 16,261,741 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11016,256,452 - 16,262,788 (+)NCBI
Celera1015,659,266 - 15,665,607 (+)NCBICelera
Cytogenetic Map10q12NCBI
Bod1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0NW_00495540826,235,229 - 26,242,576 (-)NCBIChiLan1.0ChiLan1.0
BOD1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.15175,857,814 - 175,866,951 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl5175,857,814 - 175,866,951 (-)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v05168,951,787 - 168,960,934 (-)NCBIMhudiblu_PPA_v0panPan3
BOD1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1438,888,096 - 38,895,539 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha438,834,963 - 38,842,274 (+)NCBI
ROS_Cfam_1.0439,259,503 - 39,266,976 (+)NCBI
UMICH_Zoey_3.1439,077,779 - 39,085,242 (+)NCBI
UNSW_CanFamBas_1.0439,266,320 - 39,273,785 (+)NCBI
UU_Cfam_GSD_1.0439,774,971 - 39,782,432 (+)NCBI
BOD1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.11650,734,510 - 50,743,417 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21654,988,365 - 54,996,776 (-)NCBISscrofa10.2Sscrofa10.2susScr3
BOD1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12375,761,476 - 75,771,205 (-)NCBIChlSab1.1chlSab2
Vero_WHO_p1.0NW_0236660342,834,544 - 2,844,425 (+)NCBIVero_WHO_p1.0
Bod1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_00462473316,459,383 - 16,469,343 (+)NCBIHetGla_female_1.0hetGla2


Expression


Sequence


Reference Sequences
RefSeq Acc Id: XM_021732310   ⟹   XP_021587985
RefSeq Status:
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
SpeTri2.0NW_0049366092,034,271 - 2,096,274 (+)NCBI
Sequence:
RefSeq Acc Id: XM_040273327   ⟹   XP_040129261
RefSeq Status:
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440721393,357,695 - 93,425,351 (+)NCBI
Protein Sequences
Protein RefSeqs XP_040129261 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein KAG3265243 (Get FASTA)   NCBI Sequence Viewer  
Reference Sequences
RefSeq Acc Id: XP_021587985   ⟸   XM_021732310
- Sequence:
RefSeq Acc Id: XP_040129261   ⟸   XM_040273327


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSSTOG00000030887 ENTREZGENE
NCBI Gene Bod1 ENTREZGENE