Sf1 (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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HiC_Itri_2 | NW_024404947 | 8,091,417 - 8,104,506 (+) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936599 | 4,533,795 - 4,546,853 (+) | Ensembl | SpeTri2.0 | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936599 | 4,533,664 - 4,546,857 (+) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
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SF1 (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
---|
GRCh38 | 11 | 64,764,606 - 64,778,542 (-) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 11 | 64,764,606 - 64,778,786 (-) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 11 | 64,532,078 - 64,546,014 (-) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 11 | 64,288,654 - 64,302,817 (-) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Build 34 | 11 | 64,288,653 - 64,302,817 | NCBI | | | | | Celera | 11 | 61,858,574 - 61,872,815 (-) | NCBI | | Celera | | | Cytogenetic Map | 11 | q13.1 | NCBI | | | | | HuRef | 11 | 60,858,921 - 60,873,339 (-) | NCBI | | HuRef | | | CHM1_1 | 11 | 64,415,846 - 64,430,091 (-) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 11 | 64,757,911 - 64,771,848 (-) | NCBI | | T2T-CHM13v2.0 | | |
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Sf1 (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCm39 | 19 | 6,413,952 - 6,428,060 (+) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 19 | 6,413,720 - 6,428,060 (+) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 19 | 6,363,673 - 6,378,038 (+) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 19 | 6,363,690 - 6,378,030 (+) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 19 | 6,363,690 - 6,378,038 (+) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 19 | 6,364,088 - 6,376,425 (+) | NCBI | | MGSCv36 | mm8 | | Celera | 19 | 6,236,708 - 6,251,056 (+) | NCBI | | Celera | | | Cytogenetic Map | 19 | A | NCBI | | | | | cM Map | 19 | 4.48 | NCBI | | | | |
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Sf1 (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
---|
GRCr8 | 1 | 213,090,256 - 213,112,688 (+) | NCBI | | GRCr8 | | | mRatBN7.2 | 1 | 203,670,016 - 203,683,432 (+) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 1 | 203,670,018 - 203,684,330 (+) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 1 | 212,018,848 - 212,032,153 (+) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 1 | 219,115,356 - 219,128,639 (+) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 1 | 211,806,411 - 211,819,694 (+) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 1 | 221,735,512 - 221,749,216 (+) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 1 | 221,735,517 - 221,749,086 (+) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 1 | 228,723,282 - 228,737,009 (+) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 1 | 209,146,177 - 209,159,459 (+) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | RGSC_v3.1 | 1 | 209,312,189 - 209,313,441 (+) | NCBI | | | | | Celera | 1 | 201,203,443 - 201,216,725 (+) | NCBI | | Celera | | | Cytogenetic Map | 1 | q43 | NCBI | | | | |
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Sf1 (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChiLan1.0 Ensembl | NW_004955422 | 20,391,722 - 20,551,870 (+) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955422 | 20,391,340 - 20,406,555 (+) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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SF1 (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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NHGRI_mPanPan1-v2 | 9 | 65,990,503 - 66,006,673 (-) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 11 | 67,033,499 - 67,048,030 (-) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 11 | 60,120,126 - 60,134,279 (-) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 11 | 63,461,318 - 63,473,350 (-) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 11 | 63,461,318 - 63,473,355 (-) | Ensembl | panpan1.1 | | panPan2 | |
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SF1 (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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CanFam3.1 | 18 | 52,380,058 - 52,393,833 (+) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 18 | 52,380,211 - 52,393,048 (+) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 18 | 50,987,426 - 51,001,160 (+) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 18 | 53,421,292 - 53,435,068 (+) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 18 | 53,421,043 - 53,435,063 (+) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 18 | 52,516,258 - 52,529,989 (+) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 18 | 52,102,165 - 52,115,924 (+) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 18 | 52,886,303 - 52,900,036 (+) | NCBI | | UU_Cfam_GSD_1.0 | | |
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SF1 (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
Sscrofa11.1 Ensembl | 2 | 7,391,383 - 7,404,948 (+) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 2 | 7,391,295 - 7,404,693 (+) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 2 | 6,522,689 - 6,537,534 (+) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
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SF1 (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
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ChlSab1.1 | 1 | 9,456,524 - 9,470,920 (+) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 1 | 9,456,971 - 9,472,396 (+) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666038 | 106,845,714 - 106,860,060 (+) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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Sf1 (Heterocephalus glaber - naked mole-rat) |
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