Myo18a (myosin XVIIIA) - Rat Genome Database

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Gene: Myo18a (myosin XVIIIA) Ictidomys tridecemlineatus
Analyze
Symbol: Myo18a
Name: myosin XVIIIA
RGD ID: 12595228
Description: ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); INVOLVED IN canonical NF-kappaB signal transduction (ortholog); cellular response to type II interferon (ortholog); ASSOCIATED WITH genetic disease (ortholog); Hydrops Fetalis (ortholog); prostate cancer (ortholog); FOUND IN brush border (ortholog); cytoskeleton (ortholog); phagocytic vesicle (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: myosin XVIIIA, transcript variant X1; myosin XVIIIA, transcript variant X10; myosin XVIIIA, transcript variant X11; myosin XVIIIA, transcript variant X12; myosin XVIIIA, transcript variant X13; myosin XVIIIA, transcript variant X14; myosin XVIIIA, transcript variant X15; myosin XVIIIA, transcript variant X16; myosin XVIIIA, transcript variant X17; myosin XVIIIA, transcript variant X18; myosin XVIIIA, transcript variant X2; myosin XVIIIA, transcript variant X3; myosin XVIIIA, transcript variant X4; myosin XVIIIA, transcript variant X5; myosin XVIIIA, transcript variant X6; myosin XVIIIA, transcript variant X7; myosin XVIIIA, transcript variant X8; myosin XVIIIA, transcript variant X9; unconventional myosin-XVIIIa
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: SpeTri2.0 - Squirrel SpeTri2.0 Assembly
Position:
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440560242,379,220 - 42,473,940 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365385,258,401 - 5,344,669 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365385,257,165 - 5,351,757 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

References
Additional References at PubMed
PMID:22301074  


Genomics

Comparative Map Data
Myo18a
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440560242,379,220 - 42,473,940 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365385,258,401 - 5,344,669 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365385,257,165 - 5,351,757 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
MYO18A
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381729,071,122 - 29,180,398 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1729,071,122 - 29,180,398 (-)EnsemblGRCh38hg38GRCh38
GRCh371727,398,140 - 27,507,416 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361724,424,654 - 24,531,533 (-)NCBINCBI36Build 36hg18NCBI36
Build 341724,424,664 - 24,426,753NCBI
Celera1724,259,886 - 24,366,927 (-)NCBICelera
Cytogenetic Map17q11.2NCBI
HuRef1723,608,764 - 23,715,901 (-)NCBIHuRef
CHM1_11727,463,017 - 27,569,879 (-)NCBICHM1_1
T2T-CHM13v2.01730,013,842 - 30,123,093 (-)NCBIT2T-CHM13v2.0
Myo18a
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391177,654,066 - 77,756,806 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1177,654,072 - 77,756,806 (+)EnsemblGRCm39 Ensembl
GRCm381177,763,240 - 77,865,988 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1177,763,246 - 77,865,980 (+)EnsemblGRCm38mm10GRCm38
MGSCv371177,590,767 - 77,679,482 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361177,593,460 - 77,682,175 (+)NCBIMGSCv36mm8
Celera1185,276,608 - 85,365,361 (+)NCBICelera
Cytogenetic Map11B5NCBI
cM Map1146.74NCBI
Myo18a
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81063,152,303 - 63,253,543 (+)NCBIGRCr8
mRatBN7.21062,654,218 - 62,755,465 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1062,654,281 - 62,755,468 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1067,286,116 - 67,386,748 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01066,791,627 - 66,892,122 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01062,261,757 - 62,362,375 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01064,979,770 - 65,080,535 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1064,979,770 - 65,080,535 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01066,545,745 - 66,646,100 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41063,818,690 - 63,906,414 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera1061,634,525 - 61,734,518 (+)NCBICelera
Cytogenetic Map10q24NCBI
Myo18a
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554814,028,706 - 4,113,878 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554814,020,274 - 4,115,014 (+)NCBIChiLan1.0ChiLan1.0
MYO18A
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21935,247,597 - 35,384,086 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11737,128,726 - 37,265,227 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01727,593,787 - 27,700,801 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11728,116,279 - 28,208,301 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1728,116,279 - 28,208,301 (+)Ensemblpanpan1.1panPan2
MYO18A
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1943,226,170 - 43,325,026 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl943,227,187 - 43,322,545 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha942,381,105 - 42,479,871 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0944,043,174 - 44,141,965 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl944,043,182 - 44,142,168 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1942,826,664 - 42,925,410 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0943,119,129 - 43,217,629 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0943,197,914 - 43,296,683 (-)NCBIUU_Cfam_GSD_1.0
MYO18A
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11622,836,856 - 22,942,366 (-)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_0236660757,163,834 - 7,269,590 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Myo18a
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247861,629,949 - 1,715,031 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247861,626,555 - 1,726,204 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts XM_021728111 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021728112 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021728113 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021728114 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021728115 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021728116 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021728117 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021728118 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021728119 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021728120 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021728121 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021728122 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021728123 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021728124 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021728125 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021728126 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021728128 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021728129 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_040269211 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_040269212 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_040269213 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_040269214 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_040269215 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_040269216 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_040269217 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_040269218 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_040269219 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_040269220 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_040269221 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_040269222 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_040269223 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_040269224 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_040269225 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_040269226 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_040269227 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_040269228 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_040269229 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_040269230 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_040269231 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_040269232 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_040269233 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide JAESOR010000662 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

RefSeq Acc Id: ENSSTOT00000003647   ⟹   ENSSTOP00000003265
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
SpeTri2.0 EnsemblNW_0049365385,258,401 - 5,320,437 (-)Ensembl
RefSeq Acc Id: ENSSTOT00000031687   ⟹   ENSSTOP00000028837
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
SpeTri2.0 EnsemblNW_0049365385,258,401 - 5,344,669 (-)Ensembl
RefSeq Acc Id: ENSSTOT00000033391   ⟹   ENSSTOP00000028604
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
SpeTri2.0 EnsemblNW_0049365385,258,401 - 5,344,669 (-)Ensembl
RefSeq Acc Id: ENSSTOT00000033526   ⟹   ENSSTOP00000027204
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
SpeTri2.0 EnsemblNW_0049365385,258,401 - 5,320,437 (-)Ensembl
RefSeq Acc Id: ENSSTOT00000035419   ⟹   ENSSTOP00000024097
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
SpeTri2.0 EnsemblNW_0049365385,258,401 - 5,344,669 (-)Ensembl
RefSeq Acc Id: ENSSTOT00000038825   ⟹   ENSSTOP00000030297
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
SpeTri2.0 EnsemblNW_0049365385,258,401 - 5,344,669 (-)Ensembl
RefSeq Acc Id: ENSSTOT00000039637   ⟹   ENSSTOP00000029209
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
SpeTri2.0 EnsemblNW_0049365385,305,712 - 5,314,687 (-)Ensembl
RefSeq Acc Id: ENSSTOT00000040405   ⟹   ENSSTOP00000025832
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
SpeTri2.0 EnsemblNW_0049365385,258,401 - 5,344,669 (-)Ensembl
RefSeq Acc Id: ENSSTOT00000043168   ⟹   ENSSTOP00000026643
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
SpeTri2.0 EnsemblNW_0049365385,258,401 - 5,344,669 (-)Ensembl
RefSeq Acc Id: XM_021728112   ⟹   XP_021583787
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440560242,379,866 - 42,473,936 (-)NCBI
SpeTri2.0NW_0049365385,258,109 - 5,351,757 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021728121   ⟹   XP_021583796
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440560242,379,866 - 42,466,809 (-)NCBI
SpeTri2.0NW_0049365385,258,109 - 5,345,964 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021728122   ⟹   XP_021583797
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440560242,379,220 - 42,466,809 (-)NCBI
SpeTri2.0NW_0049365385,257,165 - 5,344,754 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021728123   ⟹   XP_021583798
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440560242,379,220 - 42,466,809 (-)NCBI
SpeTri2.0NW_0049365385,257,165 - 5,344,754 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021728125   ⟹   XP_021583800
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440560242,379,220 - 42,466,809 (-)NCBI
SpeTri2.0NW_0049365385,257,165 - 5,344,754 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021728126   ⟹   XP_021583801
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440560242,379,220 - 42,466,809 (-)NCBI
SpeTri2.0NW_0049365385,257,165 - 5,344,754 (-)NCBI
Sequence:
RefSeq Acc Id: XM_040269211   ⟹   XP_040125145
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440560242,379,866 - 42,473,939 (-)NCBI
RefSeq Acc Id: XM_040269212   ⟹   XP_040125146
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440560242,379,866 - 42,473,939 (-)NCBI
RefSeq Acc Id: XM_040269213   ⟹   XP_040125147
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440560242,379,866 - 42,473,939 (-)NCBI
RefSeq Acc Id: XM_040269214   ⟹   XP_040125148
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440560242,379,866 - 42,473,939 (-)NCBI
RefSeq Acc Id: XM_040269215   ⟹   XP_040125149
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440560242,379,866 - 42,473,940 (-)NCBI
RefSeq Acc Id: XM_040269216   ⟹   XP_040125150
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440560242,379,866 - 42,473,939 (-)NCBI
RefSeq Acc Id: XM_040269217   ⟹   XP_040125151
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440560242,379,866 - 42,473,937 (-)NCBI
RefSeq Acc Id: XM_040269218   ⟹   XP_040125152
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440560242,379,866 - 42,473,939 (-)NCBI
RefSeq Acc Id: XM_040269219   ⟹   XP_040125153
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440560242,380,456 - 42,473,937 (-)NCBI
RefSeq Acc Id: XM_040269220   ⟹   XP_040125154
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440560242,380,456 - 42,473,937 (-)NCBI
RefSeq Acc Id: XM_040269221   ⟹   XP_040125155
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440560242,379,866 - 42,473,938 (-)NCBI
RefSeq Acc Id: XM_040269222   ⟹   XP_040125156
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440560242,379,866 - 42,473,938 (-)NCBI
RefSeq Acc Id: XM_040269223   ⟹   XP_040125157
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440560242,391,640 - 42,473,939 (-)NCBI
RefSeq Acc Id: XM_040269224   ⟹   XP_040125158
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440560242,379,866 - 42,473,936 (-)NCBI
RefSeq Acc Id: XM_040269225   ⟹   XP_040125159
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440560242,379,866 - 42,473,936 (-)NCBI
RefSeq Acc Id: XM_040269226   ⟹   XP_040125160
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440560242,379,866 - 42,473,935 (-)NCBI
RefSeq Acc Id: XM_040269227   ⟹   XP_040125161
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440560242,379,866 - 42,473,935 (-)NCBI
RefSeq Acc Id: XM_040269228   ⟹   XP_040125162
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440560242,379,866 - 42,473,935 (-)NCBI
RefSeq Acc Id: XM_040269229   ⟹   XP_040125163
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440560242,379,866 - 42,436,810 (-)NCBI
RefSeq Acc Id: XM_040269230   ⟹   XP_040125164
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440560242,379,866 - 42,473,935 (-)NCBI
RefSeq Acc Id: XM_040269231   ⟹   XP_040125165
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440560242,379,866 - 42,473,935 (-)NCBI
RefSeq Acc Id: XM_040269232   ⟹   XP_040125166
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440560242,379,866 - 42,473,935 (-)NCBI
RefSeq Acc Id: XM_040269233   ⟹   XP_040125167
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440560242,379,866 - 42,466,809 (-)NCBI
Protein Sequences
Protein RefSeqs XP_021583787 (Get FASTA)   NCBI Sequence Viewer  
  XP_021583796 (Get FASTA)   NCBI Sequence Viewer  
  XP_021583797 (Get FASTA)   NCBI Sequence Viewer  
  XP_021583798 (Get FASTA)   NCBI Sequence Viewer  
  XP_021583800 (Get FASTA)   NCBI Sequence Viewer  
  XP_021583801 (Get FASTA)   NCBI Sequence Viewer  
  XP_040125145 (Get FASTA)   NCBI Sequence Viewer  
  XP_040125146 (Get FASTA)   NCBI Sequence Viewer  
  XP_040125147 (Get FASTA)   NCBI Sequence Viewer  
  XP_040125148 (Get FASTA)   NCBI Sequence Viewer  
  XP_040125149 (Get FASTA)   NCBI Sequence Viewer  
  XP_040125150 (Get FASTA)   NCBI Sequence Viewer  
  XP_040125151 (Get FASTA)   NCBI Sequence Viewer  
  XP_040125152 (Get FASTA)   NCBI Sequence Viewer  
  XP_040125153 (Get FASTA)   NCBI Sequence Viewer  
  XP_040125154 (Get FASTA)   NCBI Sequence Viewer  
  XP_040125155 (Get FASTA)   NCBI Sequence Viewer  
  XP_040125156 (Get FASTA)   NCBI Sequence Viewer  
  XP_040125157 (Get FASTA)   NCBI Sequence Viewer  
  XP_040125158 (Get FASTA)   NCBI Sequence Viewer  
  XP_040125159 (Get FASTA)   NCBI Sequence Viewer  
  XP_040125160 (Get FASTA)   NCBI Sequence Viewer  
  XP_040125161 (Get FASTA)   NCBI Sequence Viewer  
  XP_040125162 (Get FASTA)   NCBI Sequence Viewer  
  XP_040125163 (Get FASTA)   NCBI Sequence Viewer  
  XP_040125164 (Get FASTA)   NCBI Sequence Viewer  
  XP_040125165 (Get FASTA)   NCBI Sequence Viewer  
  XP_040125166 (Get FASTA)   NCBI Sequence Viewer  
  XP_040125167 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSSTOP00000003265.3
  ENSSTOP00000024097.1
  ENSSTOP00000025832.1
  ENSSTOP00000026643.1
  ENSSTOP00000027204.1
  ENSSTOP00000028604.1
  ENSSTOP00000028837.1
  ENSSTOP00000029209.1
  ENSSTOP00000030297.1
GenBank Protein KAG3269638 (Get FASTA)   NCBI Sequence Viewer  
  KAG3269639 (Get FASTA)   NCBI Sequence Viewer  
  KAG3269640 (Get FASTA)   NCBI Sequence Viewer  
  KAG3269641 (Get FASTA)   NCBI Sequence Viewer  
  KAG3269642 (Get FASTA)   NCBI Sequence Viewer  
  KAG3269643 (Get FASTA)   NCBI Sequence Viewer  
  KAG3269644 (Get FASTA)   NCBI Sequence Viewer  
  KAG3269645 (Get FASTA)   NCBI Sequence Viewer  
  KAG3269646 (Get FASTA)   NCBI Sequence Viewer  
  KAG3269647 (Get FASTA)   NCBI Sequence Viewer  
  KAG3269648 (Get FASTA)   NCBI Sequence Viewer  
  KAG3269649 (Get FASTA)   NCBI Sequence Viewer  
  KAG3269650 (Get FASTA)   NCBI Sequence Viewer  
  KAG3269651 (Get FASTA)   NCBI Sequence Viewer  
  KAG3269652 (Get FASTA)   NCBI Sequence Viewer  
  KAG3269653 (Get FASTA)   NCBI Sequence Viewer  
  KAG3269654 (Get FASTA)   NCBI Sequence Viewer  
  KAG3269655 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: XP_021583801   ⟸   XM_021728126
- Peptide Label: isoform X27
- UniProtKB: A0A287CX01 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_021583798   ⟸   XM_021728123
- Peptide Label: isoform X25
- UniProtKB: A0A287D9Q4 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_021583800   ⟸   XM_021728125
- Peptide Label: isoform X26
- UniProtKB: A0A287CX01 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_021583797   ⟸   XM_021728122
- Peptide Label: isoform X24
- UniProtKB: A0A287CX01 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_021583787   ⟸   XM_021728112
- Peptide Label: isoform X16
- UniProtKB: A0A287D500 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_021583796   ⟸   XM_021728121
- Peptide Label: isoform X28
- UniProtKB: A0A287D500 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_040125149   ⟸   XM_040269215
- Peptide Label: isoform X5
- UniProtKB: A0A287D500 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_040125150   ⟸   XM_040269216
- Peptide Label: isoform X6
- UniProtKB: A0A287D500 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_040125152   ⟸   XM_040269218
- Peptide Label: isoform X8
- UniProtKB: A0A287CS46 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_040125147   ⟸   XM_040269213
- Peptide Label: isoform X3
- UniProtKB: A0A287D500 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_040125146   ⟸   XM_040269212
- Peptide Label: isoform X2
- UniProtKB: A0A287D500 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_040125148   ⟸   XM_040269214
- Peptide Label: isoform X4
- UniProtKB: A0A287D500 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_040125145   ⟸   XM_040269211
- Peptide Label: isoform X1
- UniProtKB: A0A287D500 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_040125155   ⟸   XM_040269221
- Peptide Label: isoform X11
- UniProtKB: A0A287CS46 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_040125156   ⟸   XM_040269222
- Peptide Label: isoform X12
- UniProtKB: A0A287D500 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_040125151   ⟸   XM_040269217
- Peptide Label: isoform X7
- UniProtKB: A0A287D500 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_040125159   ⟸   XM_040269225
- Peptide Label: isoform X15
- UniProtKB: A0A287D500 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_040125158   ⟸   XM_040269224
- Peptide Label: isoform X14
- UniProtKB: A0A287D500 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_040125166   ⟸   XM_040269232
- Peptide Label: isoform X23
- UniProtKB: A0A287D9Q4 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_040125165   ⟸   XM_040269231
- Peptide Label: isoform X22
- UniProtKB: A0A287D9Q4 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_040125164   ⟸   XM_040269230
- Peptide Label: isoform X21
- UniProtKB: A0A287CS46 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_040125162   ⟸   XM_040269228
- Peptide Label: isoform X19
- UniProtKB: A0A287CS46 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_040125160   ⟸   XM_040269226
- Peptide Label: isoform X17
- UniProtKB: A0A287D500 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_040125161   ⟸   XM_040269227
- Peptide Label: isoform X18
- UniProtKB: A0A287CS46 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_040125167   ⟸   XM_040269233
- Peptide Label: isoform X29
- UniProtKB: A0A287D500 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_040125163   ⟸   XM_040269229
- Peptide Label: isoform X20
- UniProtKB: A0A287D101 (UniProtKB/TrEMBL),   I3M2N8 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_040125154   ⟸   XM_040269220
- Peptide Label: isoform X10
- UniProtKB: A0A287D500 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_040125153   ⟸   XM_040269219
- Peptide Label: isoform X9
- UniProtKB: A0A287D500 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_040125157   ⟸   XM_040269223
- Peptide Label: isoform X13
- UniProtKB: A0A287D500 (UniProtKB/TrEMBL)
RefSeq Acc Id: ENSSTOP00000029209   ⟸   ENSSTOT00000039637
RefSeq Acc Id: ENSSTOP00000025832   ⟸   ENSSTOT00000040405
RefSeq Acc Id: ENSSTOP00000003265   ⟸   ENSSTOT00000003647
RefSeq Acc Id: ENSSTOP00000026643   ⟸   ENSSTOT00000043168
RefSeq Acc Id: ENSSTOP00000030297   ⟸   ENSSTOT00000038825
RefSeq Acc Id: ENSSTOP00000028604   ⟸   ENSSTOT00000033391
RefSeq Acc Id: ENSSTOP00000024097   ⟸   ENSSTOT00000035419
RefSeq Acc Id: ENSSTOP00000028837   ⟸   ENSSTOT00000031687
RefSeq Acc Id: ENSSTOP00000027204   ⟸   ENSSTOT00000033526

Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSSTOG00000003560 Ensembl, UniProtKB/TrEMBL
Ensembl Transcript ENSSTOT00000003647.3 UniProtKB/TrEMBL
  ENSSTOT00000031687.1 UniProtKB/TrEMBL
  ENSSTOT00000033391.1 UniProtKB/TrEMBL
  ENSSTOT00000033526.1 UniProtKB/TrEMBL
  ENSSTOT00000035419.1 UniProtKB/TrEMBL
  ENSSTOT00000038825.1 UniProtKB/TrEMBL
  ENSSTOT00000039637.1 UniProtKB/TrEMBL
  ENSSTOT00000040405.1 UniProtKB/TrEMBL
  ENSSTOT00000043168.1 UniProtKB/TrEMBL
Gene3D-CATH 1.10.10.820 UniProtKB/TrEMBL
  1.20.5.340 UniProtKB/TrEMBL
  1.20.58.530 UniProtKB/TrEMBL
  2.30.42.10 UniProtKB/TrEMBL
  3.30.70.1590 UniProtKB/TrEMBL
  3.40.850.10 UniProtKB/TrEMBL
  Myosin VI head, motor domain, U50 subdomain UniProtKB/TrEMBL
  Myosin, subunit A UniProtKB/TrEMBL
  Vasodilator-stimulated phosphoprotein UniProtKB/TrEMBL
InterPro IQ_motif_EF-hand-BS UniProtKB/TrEMBL
  Kinesin_motor_dom_sf UniProtKB/TrEMBL
  Myosin_head_motor_dom UniProtKB/TrEMBL
  Myosin_N UniProtKB/TrEMBL
  Myosin_tail UniProtKB/TrEMBL
  MYSc_Myo18 UniProtKB/TrEMBL
  P-loop_NTPase UniProtKB/TrEMBL
  PDZ UniProtKB/TrEMBL
  PDZ_sf UniProtKB/TrEMBL
  RecA_monomer-monomer_interface UniProtKB/TrEMBL
NCBI Gene Myo18a ENTREZGENE
PANTHER MYOSIN HEAVY CHAIN, NON-MUSCLE UniProtKB/TrEMBL
  PTHR45615:SF13 UniProtKB/TrEMBL
Pfam Myosin_head UniProtKB/TrEMBL
  Myosin_tail_1 UniProtKB/TrEMBL
  PDZ UniProtKB/TrEMBL
PRINTS MYOSINHEAVY UniProtKB/TrEMBL
PROSITE MYOSIN_MOTOR UniProtKB/TrEMBL
  PDZ UniProtKB/TrEMBL
  PS50096 UniProtKB/TrEMBL
  RECA_3 UniProtKB/TrEMBL
  SH3_LIKE UniProtKB/TrEMBL
SMART MYSc UniProtKB/TrEMBL
  PDZ UniProtKB/TrEMBL
  SM00015 UniProtKB/TrEMBL
Superfamily-SCOP Myosin rod fragments UniProtKB/TrEMBL
  SSF50156 UniProtKB/TrEMBL
  SSF52540 UniProtKB/TrEMBL
UniProt A0A287CS46 ENTREZGENE, UniProtKB/TrEMBL
  A0A287CX01 ENTREZGENE, UniProtKB/TrEMBL
  A0A287CZD8_ICTTR UniProtKB/TrEMBL
  A0A287D101 ENTREZGENE, UniProtKB/TrEMBL
  A0A287D500 ENTREZGENE, UniProtKB/TrEMBL
  A0A287D5M9_ICTTR UniProtKB/TrEMBL
  A0A287D6P0_ICTTR UniProtKB/TrEMBL
  A0A287D9Q4 ENTREZGENE, UniProtKB/TrEMBL
  I3M2N8 ENTREZGENE, UniProtKB/TrEMBL