Insl6 (insulin like 6) - Rat Genome Database

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Gene: Insl6 (insulin like 6) Ictidomys tridecemlineatus
Analyze
Symbol: Insl6
Name: insulin like 6
RGD ID: 12593780
Description: ENCODES a protein that exhibits hormone activity (inferred); INVOLVED IN apoptotic process (ortholog); ectopic germ cell programmed cell death (ortholog); fertilization (ortholog); ASSOCIATED WITH Acute Lymphoblastic Leukemia, with Lymphomatous Features (ortholog); acute myeloid leukemia (ortholog); adrenocortical carcinoma (ortholog); FOUND IN extracellular region (inferred)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: insulin-like peptide INSL6
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: SpeTri2.0 - Squirrel SpeTri2.0 Assembly
Position:
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024404947141,095,258 - 141,105,131 (-)NCBIHiC_Itri_2
SpeTri2.0NW_00493650367,933 - 78,496 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


References
Additional References at PubMed
PMID:22301074  


Genomics

Comparative Map Data
Insl6
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024404947141,095,258 - 141,105,131 (-)NCBIHiC_Itri_2
SpeTri2.0NW_00493650367,933 - 78,496 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
INSL6
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh3894,991,976 - 5,185,639 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl95,123,880 - 5,185,647 (-)EnsemblGRCh38hg38GRCh38
GRCh3795,163,868 - 5,185,639 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 3695,153,863 - 5,175,618 (-)NCBINCBI36Build 36hg18NCBI36
Build 3495,153,864 - 5,175,618NCBI
Celera95,089,480 - 5,111,235 (-)NCBICelera
Cytogenetic Map9p24.1NCBI
HuRef95,119,294 - 5,141,049 (-)NCBIHuRef
CHM1_195,164,034 - 5,185,789 (-)NCBICHM1_1
T2T-CHM13v2.094,992,955 - 5,190,714 (-)NCBIT2T-CHM13v2.0
Insl6
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391929,298,754 - 29,302,718 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1929,298,744 - 29,302,756 (-)EnsemblGRCm39 Ensembl
GRCm381929,321,354 - 29,325,318 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1929,321,344 - 29,325,356 (-)EnsemblGRCm38mm10GRCm38
MGSCv371929,395,844 - 29,399,808 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361929,387,351 - 29,391,315 (-)NCBIMGSCv36mm8
Celera1930,097,916 - 30,101,880 (-)NCBICelera
Cytogenetic Map19C1NCBI
cM Map1923.82NCBI
Insl6
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81236,483,530 - 236,487,065 (-)NCBIGRCr8
mRatBN7.21227,069,958 - 227,073,493 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1227,069,958 - 227,073,493 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1235,471,624 - 235,475,151 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01242,401,288 - 242,404,815 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01235,218,731 - 235,222,261 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01247,473,292 - 247,476,827 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1247,473,292 - 247,476,827 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01254,721,416 - 254,724,951 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41232,990,534 - 232,994,069 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11233,154,556 - 233,158,092 (-)NCBI
Celera1224,221,875 - 224,225,410 (-)NCBICelera
Cytogenetic Map1q52NCBI
Insl6
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554349,349,142 - 9,355,739 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554349,349,033 - 9,355,817 (-)NCBIChiLan1.0ChiLan1.0
INSL6
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v211119,362,748 - 119,434,904 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan19119,368,695 - 119,390,561 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v095,007,158 - 5,029,056 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.195,192,023 - 5,213,827 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl95,192,023 - 5,213,827 (-)Ensemblpanpan1.1panPan2
INSL6
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1193,457,854 - 93,474,777 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl193,459,945 - 93,474,793 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha193,866,056 - 93,882,980 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0194,011,512 - 94,028,434 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl194,011,678 - 94,028,449 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1193,643,885 - 93,660,812 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0193,368,454 - 93,385,388 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0194,132,819 - 94,149,742 (-)NCBIUU_Cfam_GSD_1.0
INSL6
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1216,792,787 - 216,823,479 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11216,792,785 - 216,820,197 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21242,534,691 - 242,561,841 (+)NCBISscrofa10.2Sscrofa10.2susScr3
INSL6
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11274,345,243 - 74,372,778 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1274,346,706 - 74,372,729 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366603862,743,906 - 62,770,088 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Insl6
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046247369,838,781 - 9,848,514 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression

RNA-SEQ Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts XM_005324120 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide JAESOR010000006 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

RefSeq Acc Id: XM_005324120   ⟹   XP_005324177
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_024404947141,095,258 - 141,105,131 (-)NCBI
SpeTri2.0NW_00493650367,933 - 78,496 (+)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_005324177 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSSTOP00000014595.3
GenBank Protein KAG3287189 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: XP_005324177   ⟸   XM_005324120
- UniProtKB: I3MRA5 (UniProtKB/TrEMBL)
- Sequence:
Protein Domains
Insulin-like


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSSTOG00000016298 UniProtKB/TrEMBL
Ensembl Transcript ENSSTOT00000016301.3 UniProtKB/TrEMBL
Gene3D-CATH Insulin-like UniProtKB/TrEMBL
InterPro Insulin-like UniProtKB/TrEMBL
  Insulin-like_sf UniProtKB/TrEMBL
  Insulin_CS UniProtKB/TrEMBL
  Repro_Hormone_Insulin-like UniProtKB/TrEMBL
NCBI Gene Insl6 ENTREZGENE
PANTHER PTHR12004:SF1 UniProtKB/TrEMBL
  RELAXIN UniProtKB/TrEMBL
Pfam Insulin UniProtKB/TrEMBL
PROSITE INSULIN UniProtKB/TrEMBL
SMART IlGF UniProtKB/TrEMBL
Superfamily-SCOP SSF56994 UniProtKB/TrEMBL
UniProt I3MRA5 ENTREZGENE, UniProtKB/TrEMBL