Dpp6 (dipeptidyl peptidase like 6) - Rat Genome Database

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Gene: Dpp6 (dipeptidyl peptidase like 6) Ictidomys tridecemlineatus
Analyze
Symbol: Dpp6
Name: dipeptidyl peptidase like 6
RGD ID: 12581180
Description: ENCODES a protein that exhibits dipeptidyl-peptidase activity (ortholog); INVOLVED IN establishment of localization in cell (ortholog); neuronal action potential (ortholog); positive regulation of potassium ion transmembrane transport (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); autistic disorder (ortholog); autosomal dominant intellectual developmental disorder 33 (ortholog); FOUND IN cell surface (ortholog); neuronal cell body (ortholog); plasma membrane (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: dipeptidyl aminopeptidase-like protein 6; dipeptidyl-peptidase 6; LOC101976906; LOC106144654; LOC106144928
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: SpeTri2.0 - Squirrel SpeTri2.0 Assembly
Position:
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_0244051183,479,982 - 4,328,689 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365278,574,849 - 9,421,763 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365278,574,455 - 9,423,445 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
Dpp6
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_0244051183,479,982 - 4,328,689 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365278,574,849 - 9,421,763 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365278,574,455 - 9,423,445 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
DPP6
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh387153,748,133 - 154,894,285 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl7153,748,133 - 154,894,285 (+)EnsemblGRCh38hg38GRCh38
GRCh377153,445,218 - 154,685,995 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 367154,060,464 - 154,316,928 (+)NCBINCBI36Build 36hg18NCBI36
Build 367153,380,710 - 153,894,933 (+)NCBINCBI36Build 36hg18NCBI36
Build 347153,867,178 - 154,122,809NCBI
Celera7148,318,756 - 148,319,129 (-)NCBICelera
Celera7148,524,570 - 149,103,154 (+)NCBICelera
Cytogenetic Map7q36.2NCBI
HuRef7147,386,496 - 147,386,897 (+)NCBIHuRef
HuRef7148,164,313 - 148,419,023 (+)NCBIHuRef
HuRef7147,843,601 - 148,104,076 (+)NCBIHuRef
CHM1_17153,592,891 - 154,272,396 (+)NCBICHM1_1
CHM1_17154,437,907 - 154,692,518 (+)NCBICHM1_1
T2T-CHM13v2.07154,922,684 - 156,069,555 (+)NCBIT2T-CHM13v2.0
CRA_TCAGchr7v27152,913,032 - 153,914,021 (+)NCBI
Dpp6
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39527,022,355 - 27,932,498 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl527,022,201 - 27,932,503 (+)EnsemblGRCm39 Ensembl
GRCm38526,817,357 - 27,727,500 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl526,817,203 - 27,727,505 (+)EnsemblGRCm38mm10GRCm38
MGSCv37527,143,897 - 28,054,040 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36527,148,144 - 28,057,245 (+)NCBIMGSCv36mm8
Celera524,366,865 - 25,273,913 (+)NCBICelera
Cytogenetic Map5B1NCBI
cM Map512.92NCBI
Dpp6
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr848,323,220 - 9,242,694 (-)NCBIGRCr8
mRatBN7.247,589,386 - 8,508,666 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl47,591,009 - 8,508,532 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx412,601,019 - 13,257,605 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.048,415,266 - 9,071,862 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.046,761,456 - 7,425,308 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.044,021,021 - 4,943,675 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl44,021,008 - 4,473,307 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.044,060,496 - 4,970,129 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.442,853,479 - 3,565,666 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.142,853,478 - 3,565,666 (-)NCBI
Celera42,039,300 - 2,691,360 (+)NCBICelera
Cytogenetic Map4q11NCBI
Dpp6
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554917,326,138 - 8,168,270 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554917,325,720 - 8,167,949 (+)NCBIChiLan1.0ChiLan1.0
DPP6
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v26190,320,559 - 191,318,987 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1742,330,825 - 43,329,253 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v07145,356,340 - 146,492,773 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.17157,635,454 - 158,220,345 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl7157,635,828 - 158,220,345 (+)Ensemblpanpan1.1panPan2
DPP6
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11617,357,461 - 18,043,547 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1617,357,522 - 18,041,822 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1617,836,985 - 18,676,560 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01618,946,820 - 19,772,122 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1618,947,086 - 19,772,116 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11617,458,435 - 18,143,487 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01617,898,790 - 18,723,713 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01617,951,354 - 18,776,429 (+)NCBIUU_Cfam_GSD_1.0
DPP6
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl183,148,483 - 4,054,118 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1183,148,479 - 3,905,845 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2183,287,948 - 3,570,413 (-)NCBISscrofa10.2Sscrofa10.2susScr3
DPP6
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.121121,882,842 - 123,035,787 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl21122,441,548 - 123,035,792 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366607218,290,133 - 19,155,278 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Dpp6
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248002,725,253 - 3,585,409 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248002,725,353 - 3,585,987 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression


Sequence


RefSeq Acc Id: ENSSTOT00000003838   ⟹   ENSSTOP00000003441
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
SpeTri2.0 EnsemblNW_0049365278,689,424 - 9,421,763 (+)Ensembl
RefSeq Acc Id: ENSSTOT00000033854   ⟹   ENSSTOP00000026504
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
SpeTri2.0 EnsemblNW_0049365278,574,849 - 9,421,763 (+)Ensembl
RefSeq Acc Id: ENSSTOT00000041956   ⟹   ENSSTOP00000030359
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
SpeTri2.0 EnsemblNW_0049365279,005,580 - 9,421,763 (+)Ensembl
RefSeq Acc Id: XM_040292069   ⟹   XP_040148003
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_0244051183,479,982 - 4,328,689 (-)NCBI
Protein Sequences
Protein RefSeqs XP_040148003 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSSTOP00000003441.3
  ENSSTOP00000026504.1
  ENSSTOP00000030359.1
GenBank Protein KAG3277164 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: XP_040148003   ⟸   XM_040292069
- UniProtKB: A0A287CZ23 (UniProtKB/TrEMBL)
RefSeq Acc Id: ENSSTOP00000003441   ⟸   ENSSTOT00000003838
RefSeq Acc Id: ENSSTOP00000026504   ⟸   ENSSTOT00000033854
RefSeq Acc Id: ENSSTOP00000030359   ⟸   ENSSTOT00000041956

Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSSTOG00000003823 Ensembl, UniProtKB/TrEMBL
Ensembl Transcript ENSSTOT00000003838.3 UniProtKB/TrEMBL
  ENSSTOT00000033854.1 UniProtKB/TrEMBL
  ENSSTOT00000041956.1 UniProtKB/TrEMBL
Gene3D-CATH 3.40.50.1820 UniProtKB/TrEMBL
  Dipeptidylpeptidase IV, N-terminal domain UniProtKB/TrEMBL
InterPro AB_hydrolase UniProtKB/TrEMBL
  Peptidase_S9 UniProtKB/TrEMBL
  Peptidase_S9B_N UniProtKB/TrEMBL
NCBI Gene LOC101976906 ENTREZGENE
PANTHER DIPEPTIDYL AMINOPEPTIDASE-LIKE PROTEIN 6 UniProtKB/TrEMBL
  PROTEASE FAMILY S9B,C DIPEPTIDYL-PEPTIDASE IV-RELATED UniProtKB/TrEMBL
Pfam DPPIV_N UniProtKB/TrEMBL
  Peptidase_S9 UniProtKB/TrEMBL
Superfamily-SCOP DPP6 N-terminal domain-like UniProtKB/TrEMBL
  SSF53474 UniProtKB/TrEMBL
UniProt A0A287CZ23 ENTREZGENE, UniProtKB/TrEMBL
  A0A287D9Z3_ICTTR UniProtKB/TrEMBL
  I3M337_ICTTR UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2017-07-14 Dpp6  dipeptidyl peptidase like 6  LOC106144654  dipeptidyl aminopeptidase-like protein 6  Data merged from RGD:12661862 737654 PROVISIONAL
2017-07-14 Dpp6  dipeptidyl peptidase like 6  LOC106144928  dipeptidyl aminopeptidase-like protein 6  Data merged from RGD:12624299 737654 PROVISIONAL
2017-07-13 Dpp6  dipeptidyl peptidase like 6  LOC101976906  dipeptidyl aminopeptidase-like protein 6  Symbol and/or name change 5135510 APPROVED