Npy5r (neuropeptide Y receptor Y5) - Rat Genome Database

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Gene: Npy5r (neuropeptide Y receptor Y5) Ictidomys tridecemlineatus
Analyze
Symbol: Npy5r
Name: neuropeptide Y receptor Y5
RGD ID: 12578558
Description: ENCODES a protein that exhibits neuropeptide Y receptor activity (ortholog); pancreatic polypeptide receptor activity (ortholog); peptide YY receptor activity (ortholog); INVOLVED IN chemical synaptic transmission (ortholog); eating behavior (ortholog); generation of ovulation cycle rhythm (ortholog); ASSOCIATED WITH atherosclerosis (ortholog); childhood absence epilepsy (ortholog); coronary restenosis (ortholog); FOUND IN GABA-ergic synapse (ortholog); presynapse (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: neuropeptide Y receptor type 5
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: SpeTri2.0 - Squirrel SpeTri2.0 Assembly
Position:
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494316,314,341 - 16,321,819 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365552,248,699 - 2,252,637 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365552,248,699 - 2,252,637 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
Npy5r
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494316,314,341 - 16,321,819 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365552,248,699 - 2,252,637 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365552,248,699 - 2,252,637 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
NPY5R
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh384163,343,892 - 163,352,403 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl4163,343,892 - 163,351,934 (+)EnsemblGRCh38hg38GRCh38
GRCh374164,265,044 - 164,273,086 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 364164,484,541 - 164,492,536 (+)NCBINCBI36Build 36hg18NCBI36
Build 344164,622,695 - 164,630,689NCBI
Celera4161,597,299 - 161,605,294 (+)NCBICelera
Cytogenetic Map4q32.2NCBI
HuRef4160,019,138 - 160,027,132 (+)NCBIHuRef
CHM1_14164,241,524 - 164,249,529 (+)NCBICHM1_1
T2T-CHM13v2.04166,691,703 - 166,700,212 (+)NCBIT2T-CHM13v2.0
Npy5r
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39867,132,617 - 67,140,746 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl867,132,617 - 67,140,780 (-)EnsemblGRCm39 Ensembl
GRCm38866,679,965 - 66,688,094 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl866,679,965 - 66,688,128 (-)EnsemblGRCm38mm10GRCm38
MGSCv37869,203,864 - 69,211,993 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36869,608,956 - 69,617,083 (-)NCBIMGSCv36mm8
Celera869,234,119 - 69,242,248 (-)NCBICelera
Cytogenetic Map8B3.1NCBI
cM Map833.15NCBI
Npy5r
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81627,822,055 - 27,830,012 (+)NCBIGRCr8
mRatBN7.21623,055,427 - 23,063,384 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1623,055,427 - 23,063,382 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1626,418,641 - 26,426,581 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01629,853,331 - 29,861,273 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01625,784,247 - 25,792,193 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01624,796,685 - 24,805,730 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1624,797,124 - 24,805,079 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01624,680,437 - 24,688,657 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41624,765,175 - 24,773,132 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11624,765,172 - 24,773,128 (+)NCBI
Celera1623,179,732 - 23,187,687 (+)NCBICelera
RH 3.4 Map16280.0RGD
Cytogenetic Map16p14NCBI
Npy5r
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495540341,667,632 - 41,675,619 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495540341,667,632 - 41,675,619 (-)NCBIChiLan1.0ChiLan1.0
NPY5R
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v23161,152,547 - 161,161,086 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan14161,515,067 - 161,523,610 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v04155,603,739 - 155,612,302 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.14167,392,174 - 167,400,258 (+)NCBIpanpan1.1PanPan1.1panPan2
NPY5R
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11559,600,212 - 59,608,576 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1559,606,902 - 59,608,273 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1559,971,335 - 59,972,706 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01560,359,613 - 60,366,872 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1560,365,210 - 60,366,581 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11559,599,312 - 59,600,683 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01559,690,026 - 59,691,397 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01560,059,226 - 60,060,597 (+)NCBIUU_Cfam_GSD_1.0
NPY5R
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl852,174,434 - 52,183,341 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1852,173,906 - 52,183,336 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2855,301,393 - 55,310,791 (+)NCBISscrofa10.2Sscrofa10.2susScr3
NPY5R
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.17109,790,907 - 109,801,929 (+)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_02366603789,599,999 - 89,607,808 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Npy5r
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462475813,518,951 - 13,524,840 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462475813,518,722 - 13,521,292 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSSTOT00000025531   ⟹   ENSSTOP00000019815
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
SpeTri2.0 EnsemblNW_0049365552,248,699 - 2,252,637 (-)Ensembl
RefSeq Acc Id: XM_040293407   ⟹   XP_040149341
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440494316,314,341 - 16,321,819 (+)NCBI
Protein Sequences
Protein RefSeqs XP_040149341 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSSTOP00000019815.2
GenBank Protein KAG3294459 (Get FASTA)   NCBI Sequence Viewer  
Reference Protein Sequences
RefSeq Acc Id: XP_040149341   ⟸   XM_040293407
- UniProtKB: I3N619 (UniProtKB/TrEMBL)
RefSeq Acc Id: ENSSTOP00000019815   ⟸   ENSSTOT00000025531
Protein Domains
G-protein coupled receptors family 1 profile


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSSTOG00000021377 Ensembl, UniProtKB/TrEMBL
Ensembl Transcript ENSSTOT00000025531.2 UniProtKB/TrEMBL
Gene3D-CATH Rhodopsin 7-helix transmembrane proteins UniProtKB/TrEMBL
InterPro GPCR_Rhodpsn UniProtKB/TrEMBL
  GPCR_Rhodpsn_7TM UniProtKB/TrEMBL
  NPY5_rcpt UniProtKB/TrEMBL
  NPY_rcpt UniProtKB/TrEMBL
NCBI Gene Npy5r ENTREZGENE
PANTHER NEUROPEPTIDE Y RECEPTOR UniProtKB/TrEMBL
  NEUROPEPTIDE Y RECEPTOR TYPE 5 UniProtKB/TrEMBL
Pfam 7tm_1 UniProtKB/TrEMBL
PRINTS GPCRRHODOPSN UniProtKB/TrEMBL
  NRPEPTIDEY5R UniProtKB/TrEMBL
  NRPEPTIDEYR UniProtKB/TrEMBL
PROSITE G_PROTEIN_RECEP_F1_2 UniProtKB/TrEMBL
Superfamily-SCOP Family A G protein-coupled receptor-like UniProtKB/TrEMBL
UniProt I3N619 ENTREZGENE, UniProtKB/TrEMBL