LOC101960700 (serine protease 42) - Rat Genome Database

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Gene: LOC101960700 (serine protease 42) Ictidomys tridecemlineatus
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Symbol: LOC101960700
Name: serine protease 42
RGD ID: 12576987
Description: ENCODES a protein that exhibits hydrolase activity (inferred); peptidase activity (inferred); serine-type endopeptidase activity (inferred); INVOLVED IN proteolysis (inferred)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: protease, serine, 42; Prss42
Latest Assembly: SpeTri2.0 - Squirrel SpeTri2.0 Assembly
Position:
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405118201,080,511 - 201,084,569 (-)NCBIHiC_Itri_2
SpeTri2.0NW_004936596629,820 - 633,708 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process
proteolysis  (IEA)

Molecular Function

References
Additional References at PubMed
PMID:22301074  


Genomics


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts XM_005333076 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide JAESOR010000177 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: XM_005333076   ⟹   XP_005333133
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_024405118201,080,511 - 201,084,569 (-)NCBI
SpeTri2.0NW_004936596629,820 - 633,708 (-)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_005333133 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSSTOP00000002717.3
GenBank Protein KAG3279794 (Get FASTA)   NCBI Sequence Viewer  
Reference Protein Sequences
RefSeq Acc Id: XP_005333133   ⟸   XM_005333076
- UniProtKB: I3M1K2 (UniProtKB/TrEMBL)
- Sequence:
Protein Domains
Peptidase S1


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSSTOG00000003052 UniProtKB/TrEMBL
Ensembl Transcript ENSSTOT00000003044.3 UniProtKB/TrEMBL
Gene3D-CATH 2.40.10.10 UniProtKB/TrEMBL
InterPro Peptidase_S1_PA UniProtKB/TrEMBL
  Peptidase_S1_PA_chymotrypsin UniProtKB/TrEMBL
  Peptidase_S1A UniProtKB/TrEMBL
  Trypsin_dom UniProtKB/TrEMBL
  TRYPSIN_HIS UniProtKB/TrEMBL
  TRYPSIN_SER UniProtKB/TrEMBL
NCBI Gene LOC101960700 ENTREZGENE
PANTHER PEPTIDASE S1 DOMAIN-CONTAINING PROTEIN UniProtKB/TrEMBL
  TRANSMEMBRANE PROTEASE SERINE UniProtKB/TrEMBL
Pfam Trypsin UniProtKB/TrEMBL
PRINTS CHYMOTRYPSIN UniProtKB/TrEMBL
PROSITE TRYPSIN_DOM UniProtKB/TrEMBL
  TRYPSIN_HIS UniProtKB/TrEMBL
  TRYPSIN_SER UniProtKB/TrEMBL
SMART Tryp_SPc UniProtKB/TrEMBL
Superfamily-SCOP SSF50494 UniProtKB/TrEMBL
UniProt I3M1K2 ENTREZGENE, UniProtKB/TrEMBL