| Symbol: |
Iqca1l |
| Name: |
IQ motif containing with AAA domain 1 like |
| Description: |
|
| Type: |
protein-coding
|
| RefSeq Status: |
MODEL |
| Also known as: |
IQ and AAA domain-containing protein 1-like |
| Orthologs: |
|
| Latest Assembly: |
SpeTri2.0 - Squirrel SpeTri2.0 Assembly |
| Position: |
|
| JBrowse: |
View Region in Genome Browser (JBrowse)
|
| Model |
|
Genomics
 Comparative Map Data
Iqca1l
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
|
IQCA1L
(Homo sapiens - human) |
| Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
GRCh38 | 7 | 151,190,873 - 151,205,784 (-) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh37 | 7 | 150,887,960 - 150,892,611 (-) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 7 | 150,518,893 - 150,533,515 (-) | NCBI | NCBI36 | | hg18 | NCBI36 | Celera | 7 | 145,445,301 - 145,459,925 (-) | NCBI | | | | | Cytogenetic Map | 7 | q36.1 | NCBI | | | | | HuRef | 7 | 144,698,782 - 144,703,394 (-) | NCBI | | HuRef | | | CHM1_1 | 7 | 150,896,359 - 150,910,983 (-) | NCBI | | CHM1_1 | | | CRA_TCAGchr7v2 | 7 | 150,217,480 - 150,222,131 (-) | NCBI | | | | |
|
Iqca1l
(Mus musculus - house mouse) |
| Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
GRCm38 | 5 | 24,543,434 - 24,555,469 (-) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | MGSCv37 | 5 | 24,049,252 - 24,061,287 (-) | NCBI | GRCm37 | | mm9 | NCBIm37 | MGSCv36 | 5 | 24,053,497 - 24,065,475 (-) | NCBI | | | mm8 | | Celera | 5 | 21,493,520 - 21,505,554 (-) | NCBI | | Celera | | | Cytogenetic Map | 5 | A3 | NCBI | | | | |
|
Iqca1l
(Rattus norvegicus - Norway rat) |
| Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
Rnor_6.0 | 4 | 7,144,674 - 7,157,106 (+) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 4 | 7,144,669 - 7,156,311 (+) | Ensembl | | | | | Rnor_5.0 | 4 | 7,157,192 - 7,168,818 (+) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 4 | 6,002,516 - 6,008,243 (+) | NCBI | RGSC3.4 | | rn4 | RGSC3.4 | Celera | 4 | 6,232,616 - 6,244,242 (+) | NCBI | | Celera | | | Cytogenetic Map | 4 | q11 | NCBI | | | | |
|
Iqca1l
(Chinchilla lanigera - long-tailed chinchilla) |
| Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
ChiLan1.0 | NW_004955491 | 5,609,898 - 5,623,160 (-) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
|
IQCA1L
(Pan paniscus - bonobo/pygmy chimpanzee) |
| Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
PanPan1.1 | 7 | 154,929,764 - 154,944,248 (-) | NCBI | panpan1.1 | PanPan1.1 | | | Bonobo Cytomap | 7 | | NCBI | | | | |
|
IQCA1L
(Canis lupus familiaris - dog) |
|
IQCA1L
(Sus scrofa - pig) |
|
Expression
Sequence
Nucleotide Sequences
Reference Sequences
| RefSeq Acc Id: |
XM_013359269 ⟹ XP_013214723 |
| RefSeq Status: |
|
| Type: |
CODING
|
| Position: |
| Squirrel Assembly | Chr | Position (strand) | Source |
|---|
SpeTri2.0 | NW_004936527 | 6,599,622 - 6,612,277 (-) | NCBI | |
|
| Sequence: |
ATGTCTGAGGGAACTTACCAGCGCCTCTGGGAGGCCTCCCATGTGACCCTGCAGGAGCTGCTGG
ACCAAGAGCAGCCCCTGCTGGAAGCTGTGCCCAACCGGGACCGGCAGTCCTTCCAGTATAGACT
CTCAGTGTTCTACCTGTACTACCTGGGGCTGCTGCGCCGTTTCGACACCATCTATGACCAGATG
GTTCAGCCACAGAAGCGCCGGTTGCTGCGGCGGCTGCTGGATGGCGTGGCGGGTCGTGTCCTGG
AGATCAAGGATGAGCTGGTTCGTGTTGACCTATGTGAGACCCACTGCCTGGACCGCGTGCTACA
GGATCTCAAGCTGACCCCAGCAGACTTGGAGGTTCCAATCCCCAAATACTTCCAGCTGGAGCAG
TCCGCGGCCATGAAGGAGCGCAAGCTGATCCTGGCTGAGATCCTGTCCAGAATGGAGCCAGAGC
ACCCCACGGAGACCGTCACAGGAATCAACCGGACTGACGCCATAATTCTAATACAAACTTCTGA
GCGAGCCAGGCAAGGCCGCCTCAGAGCCACCTTCATGCGAGAGATCCAGAGAGAGGAGGAGCGG
GATCGGAAGATTCGGGAGGAAGGGCATCCGAGGTTCACTCAGGACCAGAGTGCTGTCATTATAC
AGAAGGTATGGAAAGGCTATCAGCAGAGGAAACGCACCCAGCAGGACCGGCTGGCAGAGATGGA
GTTCATCGGCATGCTCCCCTCCACCAACCAGGCGGAGCGCTTTCGAATCATGTCCCGGGCCAAA
CTCAGGGAGGAAACGCGGAGGTTGCGCCAGGTGGAAAAGGAGGAGCAGTTTCGGCTGGCCATGG
AGAAGACCCACGAGGCTCTCAGAGAGGTGGAAGGGCCTGACCTGAAGGAGAAAATGAAGGACCA
AATCCGACAGTGGTTTATTGAGTGCCATGCCCTTACTGGTCGGTTCCCTGATTATCCAGAGGAG
TCTCTAGGAGGATCCTACCTGATCTTTGCAGACAAGACTCCAGAGCAGGTGAAACTAGAACTGG
AGATTCAGACTCAGGAGAGCAAAAAGAAGGAGCAAGAGAAGAATAAGAAAAAGGAAACAGAACA
GCCTACACCAGAGAAGAATAAGAAGAAAGAGAAGGAGAAAAAGGCCAGGGTGGTAAGACCTGAT
ATGACGCTGAAAATGTTGCCATCCAAGTTTATACCCATCATTGGTGCTGGACACAAGGAGTACA
AAAATCTGTGGCAGAACCGACCTGAGAGCAAACACCCAGACCAGAACTTTGACTCTGAGACCCT
CCAGAAGGAAAAGAGGAAGGAAGTGGAGCTGGAGATCCGGATTCAGGTGGACGAGCTGATGCGT
CAGGAGCTGAAGAACTTGCGTCTGGCTGTGGACAAGGAGGAGGAGAGACCCTTGAAATCTCCAA
AGAAAAAGCCTGGTACTAAAATTGGGAAGAAGAAGGGAAAAGATCTGACCCAAGACAGAACCGT
GAACTCGCTGTATGAAGAGCTTGTCTTTTTTGGCCTCCTAAAGAAGAGTGTGGCAGTGGCGTTG
AAAGACTATGTTGGTGACTGCCTCTATCTTGGGTCTGCTCTGTGTTTGGCCAACAAGTTGCGCA
TGCCCTCTCTGTTTGACATAAGACAGAACGTGGCCTTGTATGGCGTCCTTCGGCTGGGCTCCCC
AGATGTCCACTCCATGGCTCCCCTCATCCGCTCCATCCTTCTGGTGGGCCCCTCGGGCATGGGG
AAGAAGATGCTGGTGCAGGCTGTGTGCACAGAAACCGGTGCCAACCTGTTTGACCTGTCACCCA
GCAACCTTCAGGGCAAATATCCTGGCAAGAGCGGGGCGCAGTTGATGATTCACATGGTCTTCAA
GGTGGCCCGGCTCCTGCAGCCCTCTGTGATCTGGATTGGAGATGCTGAGAAGACTTTCTATAAG
AAGATCCCCAAGGAAGAGAGGAAGATGGAACCAAAGCGAATAAAGAAGGACCTCACCAAGGCCT
TGCGGCTGCTGAATCCCGGAGACCGCGTGATGCTCATAGGGACCACAGACCGGCCACAGCTGGC
TGAGATACAGGGGCTGTGCCGGATGTATGAGCGGATCCTCCTGGTGCCACGGCCGGATTATGCT
TCTCGCTATGTGCTCTGGAAGCACATGATAGAAGCCCGGGGAGCTCAGGTGACCCAGAGCCTGG
ACATCAGTGCCCTAGCCAAGGTGTCCGATGGCTATACGACCGGTCACATTTTCCAAGCCACCCA
CTCGGTGCTGAATGAACGGCGGCTCCTGCAACTGTCCAAGAGGCCCCTGGTGGCCTCAGAGTTC
TTGGGCCATCTGGCGAAGCTAGATCCAGTGTACAGGGAGGAGGAAGAGTCCCTGAAGGAGTGGT
ACTTCAAAACCCCATTGGGCAAGAAGAGTTTGAAATTTATGAAGGACCAGGAGGCCGAGGAGGC
CAAGCTGGCAAAGGAGAAGAAAAGGAAGTGA
hide sequence
|
Protein Sequences
Reference Sequences
| RefSeq Acc Id: |
XP_013214723 ⟸ XM_013359269 |
| - Sequence: |
MSEGTYQRLWEASHVTLQELLDQEQPLLEAVPNRDRQSFQYRLSVFYLYYLGLLRRFDTIYDQM
VQPQKRRLLRRLLDGVAGRVLEIKDELVRVDLCETHCLDRVLQDLKLTPADLEVPIPKYFQLEQ
SAAMKERKLILAEILSRMEPEHPTETVTGINRTDAIILIQTSERARQGRLRATFMREIQREEER
DRKIREEGHPRFTQDQSAVIIQKVWKGYQQRKRTQQDRLAEMEFIGMLPSTNQAERFRIMSRAK
LREETRRLRQVEKEEQFRLAMEKTHEALREVEGPDLKEKMKDQIRQWFIECHALTGRFPDYPEE
SLGGSYLIFADKTPEQVKLELEIQTQESKKKEQEKNKKKETEQPTPEKNKKKEKEKKARVVRPD
MTLKMLPSKFIPIIGAGHKEYKNLWQNRPESKHPDQNFDSETLQKEKRKEVELEIRIQVDELMR
QELKNLRLAVDKEEERPLKSPKKKPGTKIGKKKGKDLTQDRTVNSLYEELVFFGLLKKSVAVAL
KDYVGDCLYLGSALCLANKLRMPSLFDIRQNVALYGVLRLGSPDVHSMAPLIRSILLVGPSGMG
KKMLVQAVCTETGANLFDLSPSNLQGKYPGKSGAQLMIHMVFKVARLLQPSVIWIGDAEKTFYK
KIPKEERKMEPKRIKKDLTKALRLLNPGDRVMLIGTTDRPQLAEIQGLCRMYERILLVPRPDYA
SRYVLWKHMIEARGAQVTQSLDISALAKVSDGYTTGHIFQATHSVLNERRLLQLSKRPLVASEF
LGHLAKLDPVYREEEESLKEWYFKTPLGKKSLKFMKDQEAEEAKLAKEKKRK
hide sequence
|
Additional Information
External Database Links |
|
| RGD Object Information |
| RGD ID: |
12573917 |
| Created: |
2017-01-27 |
| Species: |
Ictidomys tridecemlineatus |
| Last Modified: |
2019-11-27 |
| Status: |
ACTIVE |
|
