Prr5 (proline rich 5) - Rat Genome Database

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Pathways
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Gene: Prr5 (proline rich 5) Ictidomys tridecemlineatus
Analyze
Symbol: Prr5
Name: proline rich 5
RGD ID: 12567753
Description: INVOLVED IN phosphatidylinositol 3-kinase/protein kinase B signal transduction (ortholog); positive regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction (ortholog); positive regulation of protein phosphorylation (ortholog); PARTICIPATES IN mTOR signaling pathway; ASSOCIATED WITH genetic disease (ortholog); intellectual disability (ortholog); Phelan-McDermid syndrome (ortholog); FOUND IN TORC2 complex (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: proline-rich protein 5
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: SpeTri2.0 - Squirrel SpeTri2.0 Assembly
Position:
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_0244049454,866,532 - 4,906,145 (-)NCBIHiC_Itri_2
SpeTri2.0NW_0049367182,094,802 - 2,170,916 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

Molecular Pathway Annotations     Click to see Annotation Detail View
References
Additional References at PubMed
PMID:30032202  


Genomics

Comparative Map Data
Prr5
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_0244049454,866,532 - 4,906,145 (-)NCBIHiC_Itri_2
SpeTri2.0NW_0049367182,094,802 - 2,170,916 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
PRR5
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh382244,668,751 - 44,737,681 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl2244,668,547 - 44,737,681 (+)EnsemblGRCh38hg38GRCh38
GRCh372245,064,631 - 45,133,561 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 362243,443,257 - 43,512,225 (+)NCBINCBI36Build 36hg18NCBI36
Celera2228,976,509 - 29,045,467 (+)NCBICelera
Cytogenetic Map22q13.31NCBI
HuRef2228,021,290 - 28,081,784 (+)NCBIHuRef
CHM1_12245,023,144 - 45,092,265 (+)NCBICHM1_1
T2T-CHM13v2.02245,152,476 - 45,221,409 (+)NCBIT2T-CHM13v2.0
Prr5
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391584,547,407 - 84,590,610 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1584,553,821 - 84,587,874 (+)EnsemblGRCm39 Ensembl
GRCm381584,663,206 - 84,706,409 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1584,669,620 - 84,703,673 (+)EnsemblGRCm38mm10GRCm38
MGSCv371584,511,428 - 84,534,103 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361584,508,768 - 84,531,438 (+)NCBIMGSCv36mm8
Celera1586,816,056 - 86,839,043 (+)NCBICelera
Cytogenetic Map15E2NCBI
cM Map1539.95NCBI
Prr5
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr87117,675,308 - 117,717,833 (+)NCBIGRCr8
mRatBN7.27115,795,351 - 115,837,880 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl7115,813,954 - 115,834,834 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx7117,564,921 - 117,585,800 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.07119,790,649 - 119,811,528 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.07119,760,095 - 119,780,974 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.07125,569,791 - 125,609,340 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl7125,576,327 - 125,613,114 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.07125,317,939 - 125,338,782 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.47122,693,577 - 122,714,377 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.17122,727,806 - 122,748,607 (+)NCBI
Celera7112,121,399 - 112,135,569 (+)NCBICelera
Cytogenetic Map7q34NCBI
Prr5
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495541329,348,303 - 29,379,659 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495541329,360,125 - 29,379,196 (+)NCBIChiLan1.0ChiLan1.0
PRR5
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22354,507,724 - 54,576,680 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan12257,200,295 - 57,269,216 (+)NCBINHGRI_mPanPan1
PRR5
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11021,164,530 - 21,188,537 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1021,164,530 - 21,210,148 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1021,095,954 - 21,122,014 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01021,902,301 - 21,950,793 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1021,901,703 - 21,950,975 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11021,622,130 - 21,648,152 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01021,942,889 - 21,969,775 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01022,116,650 - 22,142,695 (-)NCBIUU_Cfam_GSD_1.0
PRR5
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl54,467,232 - 4,525,588 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.154,467,231 - 4,525,610 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.251,777,861 - 1,804,806 (-)NCBISscrofa10.2Sscrofa10.2susScr3
PRR5
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11927,164,900 - 27,225,398 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1927,165,278 - 27,226,907 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366604598,108,330 - 98,171,694 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Prr5
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247524,683,851 - 4,707,995 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247524,684,145 - 4,726,608 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression


Sequence


Reference Sequences
RefSeq Acc Id: XM_040281785   ⟹   XP_040137719
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_0244049454,866,532 - 4,906,145 (-)NCBI
Protein Sequences
Protein RefSeqs XP_040137719 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein KAG3290763 (Get FASTA)   NCBI Sequence Viewer  
  KAG3290764 (Get FASTA)   NCBI Sequence Viewer  
  KAG3290765 (Get FASTA)   NCBI Sequence Viewer  
Reference Protein Sequences
RefSeq Acc Id: XP_040137719   ⟸   XM_040281785


Additional Information

Database Acc Id Source(s)
NCBI Gene Prr5 ENTREZGENE