Anks1b (ankyrin repeat and sterile alpha motif domain containing 1B) - Rat Genome Database

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Gene: Anks1b (ankyrin repeat and sterile alpha motif domain containing 1B) Ictidomys tridecemlineatus
Analyze
Symbol: Anks1b
Name: ankyrin repeat and sterile alpha motif domain containing 1B
RGD ID: 12560125
Description: ENCODES a protein that exhibits ephrin receptor binding (inferred); INVOLVED IN chemical synaptic transmission, postsynaptic (ortholog); postsynapse to nucleus signaling pathway (ortholog); receptor localization to synapse (ortholog); ASSOCIATED WITH genetic disease (ortholog); Wilson disease (ortholog); FOUND IN glutamatergic synapse (ortholog); hippocampal mossy fiber to CA3 synapse (ortholog); postsynaptic density (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: ankyrin repeat and sterile alpha motif domain containing 1B, transcript variant X1; ankyrin repeat and sterile alpha motif domain containing 1B, transcript variant X10; ankyrin repeat and sterile alpha motif domain containing 1B, transcript variant X11; ankyrin repeat and sterile alpha motif domain containing 1B, transcript variant X12; ankyrin repeat and sterile alpha motif domain containing 1B, transcript variant X13; ankyrin repeat and sterile alpha motif domain containing 1B, transcript variant X14; ankyrin repeat and sterile alpha motif domain containing 1B, transcript variant X15; ankyrin repeat and sterile alpha motif domain containing 1B, transcript variant X16; ankyrin repeat and sterile alpha motif domain containing 1B, transcript variant X17; ankyrin repeat and sterile alpha motif domain containing 1B, transcript variant X18; ankyrin repeat and sterile alpha motif domain containing 1B, transcript variant X19; ankyrin repeat and sterile alpha motif domain containing 1B, transcript variant X2; ankyrin repeat and sterile alpha motif domain containing 1B, transcript variant X20; ankyrin repeat and sterile alpha motif domain containing 1B, transcript variant X21; ankyrin repeat and sterile alpha motif domain containing 1B, transcript variant X22; ankyrin repeat and sterile alpha motif domain containing 1B, transcript variant X23; ankyrin repeat and sterile alpha motif domain containing 1B, transcript variant X24; ankyrin repeat and sterile alpha motif domain containing 1B, transcript variant X25; ankyrin repeat and sterile alpha motif domain containing 1B, transcript variant X26; ankyrin repeat and sterile alpha motif domain containing 1B, transcript variant X27; ankyrin repeat and sterile alpha motif domain containing 1B, transcript variant X28; ankyrin repeat and sterile alpha motif domain containing 1B, transcript variant X29; ankyrin repeat and sterile alpha motif domain containing 1B, transcript variant X3; ankyrin repeat and sterile alpha motif domain containing 1B, transcript variant X30; ankyrin repeat and sterile alpha motif domain containing 1B, transcript variant X4; ankyrin repeat and sterile alpha motif domain containing 1B, transcript variant X5; ankyrin repeat and sterile alpha motif domain containing 1B, transcript variant X6; ankyrin repeat and sterile alpha motif domain containing 1B, transcript variant X7; ankyrin repeat and sterile alpha motif domain containing 1B, transcript variant X8; ankyrin repeat and sterile alpha motif domain containing 1B, transcript variant X9; ankyrin repeat and sterile alpha motif domain-containing protein 1B
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: SpeTri2.0 - Squirrel SpeTri2.0 Assembly
Position:
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494520,743,191 - 21,793,888 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493649213,753,824 - 14,803,766 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_00493649213,753,605 - 14,805,539 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Molecular Function

References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
Anks1b
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494520,743,191 - 21,793,888 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493649213,753,824 - 14,803,766 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_00493649213,753,605 - 14,805,539 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ANKS1B
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381298,734,786 - 99,984,936 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1298,726,457 - 99,984,936 (-)EnsemblGRCh38hg38GRCh38
GRCh371299,128,564 - 100,378,714 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361297,653,202 - 98,902,563 (-)NCBINCBI36Build 36hg18NCBI36
Celera1298,793,966 - 100,043,704 (-)NCBICelera
Cytogenetic Map12q23.1NCBI
HuRef1296,189,664 - 97,280,648 (-)NCBIHuRef
CHM1_11299,093,509 - 100,344,110 (-)NCBICHM1_1
T2T-CHM13v2.01298,707,730 - 99,946,157 (-)NCBIT2T-CHM13v2.0
Anks1b
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391089,707,238 - 90,809,162 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1089,709,371 - 90,809,162 (+)EnsemblGRCm39 Ensembl
GRCm381089,872,915 - 90,973,300 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1089,873,509 - 90,973,300 (+)EnsemblGRCm38mm10GRCm38
MGSCv371089,336,254 - 90,435,730 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361089,302,828 - 90,403,103 (+)NCBIMGSCv36mm8
Celera1091,877,745 - 92,966,422 (+)NCBICelera
Cytogenetic Map10C2NCBI
cM Map1045.28NCBI
Anks1b
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8726,200,649 - 27,366,552 (+)NCBIGRCr8
mRatBN7.2724,313,339 - 25,479,307 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl724,312,843 - 25,477,693 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx726,308,631 - 27,472,150 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0728,470,984 - 29,634,542 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0728,248,382 - 29,411,942 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0730,507,135 - 31,684,604 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl730,699,476 - 31,681,182 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0730,603,416 - 31,776,175 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4726,749,708 - 27,914,155 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera721,458,045 - 22,603,947 (+)NCBICelera
Cytogenetic Map7q13NCBI
Anks1b
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495540534,700,551 - 35,775,960 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495540534,701,613 - 35,776,076 (-)NCBIChiLan1.0ChiLan1.0
ANKS1B
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v210106,792,125 - 108,043,418 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan112106,791,492 - 108,039,804 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01296,313,293 - 97,559,597 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11299,736,914 - 100,968,737 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1299,737,252 - 100,968,475 (-)Ensemblpanpan1.1panPan2
ANKS1B
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11538,128,114 - 39,186,341 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1538,129,140 - 39,186,399 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1538,508,921 - 39,565,304 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01538,790,754 - 39,848,495 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1538,790,769 - 39,235,662 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11538,062,386 - 39,106,374 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01538,155,275 - 39,212,769 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01538,428,996 - 39,486,471 (-)NCBIUU_Cfam_GSD_1.0
ANKS1B
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl584,080,669 - 85,148,976 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1584,080,505 - 85,148,742 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
ANKS1B
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11194,027,310 - 95,286,415 (-)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_023666037149,760,322 - 151,036,204 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Anks1b
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247507,871,788 - 8,827,745 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247507,871,694 - 8,829,475 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts XM_005322381 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_005322383 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_005322387 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_005322388 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_005322390 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_005322391 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_005322392 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021724491 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021724492 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021724493 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021724494 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021724495 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021724496 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021724497 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021724498 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021724499 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021724500 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021724501 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021724502 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021724503 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021724504 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021724505 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021724506 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021724507 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021724508 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021724509 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021724510 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021724511 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021724512 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021724513 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_040279559 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_040279578 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_040279583 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_040279646 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide JAESOR010000004 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSSTOT00000012245   ⟹   ENSSTOP00000010975
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
SpeTri2.0 EnsemblNW_00493649213,753,824 - 14,803,766 (+)Ensembl
RefSeq Acc Id: ENSSTOT00000032384   ⟹   ENSSTOP00000028823
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
SpeTri2.0 EnsemblNW_00493649214,433,556 - 14,803,766 (+)Ensembl
RefSeq Acc Id: ENSSTOT00000033187   ⟹   ENSSTOP00000028199
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
SpeTri2.0 EnsemblNW_00493649214,433,556 - 14,803,766 (+)Ensembl
RefSeq Acc Id: ENSSTOT00000035223   ⟹   ENSSTOP00000029038
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
SpeTri2.0 EnsemblNW_00493649214,433,556 - 14,443,836 (+)Ensembl
RefSeq Acc Id: ENSSTOT00000036829   ⟹   ENSSTOP00000027603
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
SpeTri2.0 EnsemblNW_00493649214,433,727 - 14,803,766 (+)Ensembl
RefSeq Acc Id: ENSSTOT00000041724   ⟹   ENSSTOP00000031914
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
SpeTri2.0 EnsemblNW_00493649214,433,073 - 14,803,766 (+)Ensembl
RefSeq Acc Id: ENSSTOT00000042112   ⟹   ENSSTOP00000029032
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
SpeTri2.0 EnsemblNW_00493649214,433,727 - 14,800,741 (+)Ensembl
RefSeq Acc Id: ENSSTOT00000042904   ⟹   ENSSTOP00000031857
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
SpeTri2.0 EnsemblNW_00493649214,433,556 - 14,803,766 (+)Ensembl
RefSeq Acc Id: XM_005322381   ⟹   XP_005322438
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440494520,743,191 - 21,793,888 (+)NCBI
SpeTri2.0NW_00493649213,753,605 - 14,805,275 (+)NCBI
Sequence:
RefSeq Acc Id: XM_005322383   ⟹   XP_005322440
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440494521,422,542 - 21,793,888 (+)NCBI
SpeTri2.0NW_00493649214,432,961 - 14,805,275 (+)NCBI
Sequence:
RefSeq Acc Id: XM_005322387   ⟹   XP_005322444
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440494521,422,702 - 21,793,888 (+)NCBI
SpeTri2.0NW_00493649214,433,179 - 14,805,275 (+)NCBI
Sequence:
RefSeq Acc Id: XM_005322388   ⟹   XP_005322445
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440494521,422,542 - 21,793,888 (+)NCBI
SpeTri2.0NW_00493649214,432,961 - 14,805,539 (+)NCBI
Sequence:
RefSeq Acc Id: XM_005322390   ⟹   XP_005322447
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440494521,659,485 - 21,793,888 (+)NCBI
SpeTri2.0NW_00493649214,669,887 - 14,805,539 (+)NCBI
Sequence:
RefSeq Acc Id: XM_005322391   ⟹   XP_005322448
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440494521,659,483 - 21,793,888 (+)NCBI
SpeTri2.0NW_00493649214,669,887 - 14,805,539 (+)NCBI
Sequence:
RefSeq Acc Id: XM_005322392   ⟹   XP_005322449
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440494521,659,486 - 21,793,888 (+)NCBI
SpeTri2.0NW_00493649214,669,887 - 14,805,539 (+)NCBI
Sequence:
RefSeq Acc Id: XM_021724491   ⟹   XP_021580166
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440494520,743,191 - 21,793,888 (+)NCBI
SpeTri2.0NW_00493649213,753,605 - 14,805,275 (+)NCBI
Sequence:
RefSeq Acc Id: XM_021724492   ⟹   XP_021580167
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440494520,743,375 - 21,793,888 (+)NCBI
SpeTri2.0NW_00493649213,753,611 - 14,804,760 (+)NCBI
Sequence:
RefSeq Acc Id: XM_021724493   ⟹   XP_021580168
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440494520,743,374 - 21,793,888 (+)NCBI
SpeTri2.0NW_00493649213,753,611 - 14,804,760 (+)NCBI
Sequence:
RefSeq Acc Id: XM_021724494   ⟹   XP_021580169
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440494520,743,191 - 21,793,888 (+)NCBI
SpeTri2.0NW_00493649213,753,605 - 14,805,275 (+)NCBI
Sequence:
RefSeq Acc Id: XM_021724495   ⟹   XP_021580170
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440494520,743,373 - 21,790,946 (+)NCBI
SpeTri2.0NW_00493649213,753,611 - 14,801,741 (+)NCBI
Sequence:
RefSeq Acc Id: XM_021724496   ⟹   XP_021580171
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440494520,743,191 - 21,793,888 (+)NCBI
SpeTri2.0NW_00493649213,753,605 - 14,805,275 (+)NCBI
Sequence:
RefSeq Acc Id: XM_021724497   ⟹   XP_021580172
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440494520,743,373 - 21,793,888 (+)NCBI
SpeTri2.0NW_00493649213,753,611 - 14,803,745 (+)NCBI
Sequence:
RefSeq Acc Id: XM_021724498   ⟹   XP_021580173
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440494520,743,374 - 21,790,946 (+)NCBI
SpeTri2.0NW_00493649213,753,605 - 14,801,741 (+)NCBI
Sequence:
RefSeq Acc Id: XM_021724499   ⟹   XP_021580174
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440494520,743,372 - 21,793,888 (+)NCBI
SpeTri2.0NW_00493649213,753,611 - 14,805,275 (+)NCBI
Sequence:
RefSeq Acc Id: XM_021724500   ⟹   XP_021580175
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440494520,743,370 - 21,793,888 (+)NCBI
SpeTri2.0NW_00493649213,753,611 - 14,804,760 (+)NCBI
Sequence:
RefSeq Acc Id: XM_021724502   ⟹   XP_021580177
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440494520,743,356 - 21,729,683 (+)NCBI
SpeTri2.0NW_00493649213,753,611 - 14,739,325 (+)NCBI
Sequence:
RefSeq Acc Id: XM_021724503   ⟹   XP_021580178
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440494520,743,357 - 21,735,612 (+)NCBI
SpeTri2.0NW_00493649213,753,611 - 14,747,089 (+)NCBI
Sequence:
RefSeq Acc Id: XM_021724505   ⟹   XP_021580180
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440494521,422,542 - 21,793,888 (+)NCBI
SpeTri2.0NW_00493649214,432,961 - 14,805,275 (+)NCBI
Sequence:
RefSeq Acc Id: XM_021724506   ⟹   XP_021580181
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440494521,422,857 - 21,793,888 (+)NCBI
SpeTri2.0NW_00493649214,433,246 - 14,805,539 (+)NCBI
Sequence:
RefSeq Acc Id: XM_021724507   ⟹   XP_021580182
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440494521,422,702 - 21,793,888 (+)NCBI
SpeTri2.0NW_00493649214,433,179 - 14,805,275 (+)NCBI
Sequence:
RefSeq Acc Id: XM_021724508   ⟹   XP_021580183
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440494521,422,702 - 21,793,888 (+)NCBI
SpeTri2.0NW_00493649214,433,179 - 14,805,275 (+)NCBI
Sequence:
RefSeq Acc Id: XM_021724509   ⟹   XP_021580184
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440494521,659,485 - 21,793,888 (+)NCBI
SpeTri2.0NW_00493649214,669,887 - 14,805,275 (+)NCBI
Sequence:
RefSeq Acc Id: XM_021724510   ⟹   XP_021580185
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440494521,659,473 - 21,793,888 (+)NCBI
SpeTri2.0NW_00493649214,669,887 - 14,805,275 (+)NCBI
Sequence:
RefSeq Acc Id: XM_021724511   ⟹   XP_021580186
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440494521,659,485 - 21,793,888 (+)NCBI
SpeTri2.0NW_00493649214,669,887 - 14,805,275 (+)NCBI
Sequence:
RefSeq Acc Id: XM_021724512   ⟹   XP_021580187
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440494521,659,488 - 21,793,888 (+)NCBI
SpeTri2.0NW_00493649214,669,887 - 14,805,275 (+)NCBI
Sequence:
RefSeq Acc Id: XM_021724513   ⟹   XP_021580188
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440494521,659,485 - 21,793,888 (+)NCBI
SpeTri2.0NW_00493649214,669,887 - 14,805,275 (+)NCBI
Sequence:
RefSeq Acc Id: XM_040279559   ⟹   XP_040135493
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440494520,743,370 - 21,793,888 (+)NCBI
RefSeq Acc Id: XM_040279578   ⟹   XP_040135512
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440494521,422,859 - 21,793,888 (+)NCBI
RefSeq Acc Id: XM_040279583   ⟹   XP_040135517
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440494521,422,857 - 21,793,888 (+)NCBI
RefSeq Acc Id: XM_040279646   ⟹   XP_040135580
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440494520,743,370 - 21,793,888 (+)NCBI
Protein Sequences
Protein RefSeqs XP_005322438 (Get FASTA)   NCBI Sequence Viewer  
  XP_005322440 (Get FASTA)   NCBI Sequence Viewer  
  XP_005322444 (Get FASTA)   NCBI Sequence Viewer  
  XP_005322445 (Get FASTA)   NCBI Sequence Viewer  
  XP_005322447 (Get FASTA)   NCBI Sequence Viewer  
  XP_005322448 (Get FASTA)   NCBI Sequence Viewer  
  XP_005322449 (Get FASTA)   NCBI Sequence Viewer  
  XP_021580166 (Get FASTA)   NCBI Sequence Viewer  
  XP_021580167 (Get FASTA)   NCBI Sequence Viewer  
  XP_021580168 (Get FASTA)   NCBI Sequence Viewer  
  XP_021580169 (Get FASTA)   NCBI Sequence Viewer  
  XP_021580170 (Get FASTA)   NCBI Sequence Viewer  
  XP_021580171 (Get FASTA)   NCBI Sequence Viewer  
  XP_021580172 (Get FASTA)   NCBI Sequence Viewer  
  XP_021580173 (Get FASTA)   NCBI Sequence Viewer  
  XP_021580174 (Get FASTA)   NCBI Sequence Viewer  
  XP_021580175 (Get FASTA)   NCBI Sequence Viewer  
  XP_021580177 (Get FASTA)   NCBI Sequence Viewer  
  XP_021580178 (Get FASTA)   NCBI Sequence Viewer  
  XP_021580180 (Get FASTA)   NCBI Sequence Viewer  
  XP_021580181 (Get FASTA)   NCBI Sequence Viewer  
  XP_021580182 (Get FASTA)   NCBI Sequence Viewer  
  XP_021580183 (Get FASTA)   NCBI Sequence Viewer  
  XP_021580184 (Get FASTA)   NCBI Sequence Viewer  
  XP_021580185 (Get FASTA)   NCBI Sequence Viewer  
  XP_021580186 (Get FASTA)   NCBI Sequence Viewer  
  XP_021580187 (Get FASTA)   NCBI Sequence Viewer  
  XP_021580188 (Get FASTA)   NCBI Sequence Viewer  
  XP_040135493 (Get FASTA)   NCBI Sequence Viewer  
  XP_040135512 (Get FASTA)   NCBI Sequence Viewer  
  XP_040135517 (Get FASTA)   NCBI Sequence Viewer  
  XP_040135580 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSSTOP00000010975.3
  ENSSTOP00000027603.1
  ENSSTOP00000028199.1
  ENSSTOP00000028823.1
  ENSSTOP00000029032.1
  ENSSTOP00000029038.1
  ENSSTOP00000031857.1
  ENSSTOP00000031914.1
GenBank Protein KAG3291171 (Get FASTA)   NCBI Sequence Viewer  
  KAG3291172 (Get FASTA)   NCBI Sequence Viewer  
  KAG3291173 (Get FASTA)   NCBI Sequence Viewer  
  KAG3291174 (Get FASTA)   NCBI Sequence Viewer  
  KAG3291175 (Get FASTA)   NCBI Sequence Viewer  
  KAG3291176 (Get FASTA)   NCBI Sequence Viewer  
  KAG3291177 (Get FASTA)   NCBI Sequence Viewer  
  KAG3291178 (Get FASTA)   NCBI Sequence Viewer  
  KAG3291179 (Get FASTA)   NCBI Sequence Viewer  
  KAG3291180 (Get FASTA)   NCBI Sequence Viewer  
  KAG3291181 (Get FASTA)   NCBI Sequence Viewer  
  KAG3291182 (Get FASTA)   NCBI Sequence Viewer  
  KAG3291183 (Get FASTA)   NCBI Sequence Viewer  
  KAG3291184 (Get FASTA)   NCBI Sequence Viewer  
  KAG3291185 (Get FASTA)   NCBI Sequence Viewer  
  KAG3291186 (Get FASTA)   NCBI Sequence Viewer  
  KAG3291187 (Get FASTA)   NCBI Sequence Viewer  
  KAG3291188 (Get FASTA)   NCBI Sequence Viewer  
  KAG3291189 (Get FASTA)   NCBI Sequence Viewer  
  KAG3291190 (Get FASTA)   NCBI Sequence Viewer  
  KAG3291191 (Get FASTA)   NCBI Sequence Viewer  
  KAG3291192 (Get FASTA)   NCBI Sequence Viewer  
  KAG3291193 (Get FASTA)   NCBI Sequence Viewer  
  KAG3291194 (Get FASTA)   NCBI Sequence Viewer  
  KAG3291195 (Get FASTA)   NCBI Sequence Viewer  
  KAG3291196 (Get FASTA)   NCBI Sequence Viewer  
  KAG3291197 (Get FASTA)   NCBI Sequence Viewer  
  KAG3291198 (Get FASTA)   NCBI Sequence Viewer  
  KAG3291199 (Get FASTA)   NCBI Sequence Viewer  
  KAG3291200 (Get FASTA)   NCBI Sequence Viewer  
Reference Protein Sequences
RefSeq Acc Id: XP_005322438   ⟸   XM_005322381
- Peptide Label: isoform X5
- UniProtKB: I3MIT2 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_005322445   ⟸   XM_005322388
- Peptide Label: isoform X22
- UniProtKB: A0A287DEF4 (UniProtKB/TrEMBL),   A0A287D619 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_005322440   ⟸   XM_005322383
- Peptide Label: isoform X17
- UniProtKB: A0A287D619 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_005322444   ⟸   XM_005322387
- Peptide Label: isoform X23
- UniProtKB: A0A287D619 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_005322448   ⟸   XM_005322391
- Peptide Label: isoform X26
- Sequence:
RefSeq Acc Id: XP_005322447   ⟸   XM_005322390
- Peptide Label: isoform X25
- Sequence:
RefSeq Acc Id: XP_005322449   ⟸   XM_005322392
- Peptide Label: isoform X28
- Sequence:
RefSeq Acc Id: XP_021580166   ⟸   XM_021724491
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_021580169   ⟸   XM_021724494
- Peptide Label: isoform X4
- Sequence:
RefSeq Acc Id: XP_021580171   ⟸   XM_021724496
- Peptide Label: isoform X8
- Sequence:
RefSeq Acc Id: XP_021580173   ⟸   XM_021724498
- Peptide Label: isoform X9
- Sequence:
RefSeq Acc Id: XP_021580174   ⟸   XM_021724499
- Peptide Label: isoform X10
- Sequence:
RefSeq Acc Id: XP_021580168   ⟸   XM_021724493
- Peptide Label: isoform X3
- Sequence:
RefSeq Acc Id: XP_021580167   ⟸   XM_021724492
- Peptide Label: isoform X2
- Sequence:
RefSeq Acc Id: XP_021580175   ⟸   XM_021724500
- Peptide Label: isoform X11
- Sequence:
RefSeq Acc Id: XP_021580172   ⟸   XM_021724497
- Peptide Label: isoform X7
- Sequence:
RefSeq Acc Id: XP_021580170   ⟸   XM_021724495
- Peptide Label: isoform X6
- Sequence:
RefSeq Acc Id: XP_021580178   ⟸   XM_021724503
- Peptide Label: isoform X14
- Sequence:
RefSeq Acc Id: XP_021580177   ⟸   XM_021724502
- Peptide Label: isoform X13
- Sequence:
RefSeq Acc Id: XP_021580180   ⟸   XM_021724505
- Peptide Label: isoform X18
- UniProtKB: A0A287D619 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_021580182   ⟸   XM_021724507
- Peptide Label: isoform X20
- UniProtKB: A0A287D619 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_021580183   ⟸   XM_021724508
- Peptide Label: isoform X21
- UniProtKB: A0A287D619 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_021580181   ⟸   XM_021724506
- Peptide Label: isoform X19
- UniProtKB: A0A287D619 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_021580184   ⟸   XM_021724509
- Peptide Label: isoform X24
- Sequence:
RefSeq Acc Id: XP_021580185   ⟸   XM_021724510
- Peptide Label: isoform X27
- Sequence:
RefSeq Acc Id: XP_021580186   ⟸   XM_021724511
- Peptide Label: isoform X29
- Sequence:
RefSeq Acc Id: XP_021580187   ⟸   XM_021724512
- Peptide Label: isoform X30
- Sequence:
RefSeq Acc Id: XP_021580188   ⟸   XM_021724513
- Peptide Label: isoform X31
- Sequence:
RefSeq Acc Id: XP_040135493   ⟸   XM_040279559
- Peptide Label: isoform X12
RefSeq Acc Id: XP_040135580   ⟸   XM_040279646
- Peptide Label: isoform X32
RefSeq Acc Id: XP_040135517   ⟸   XM_040279583
- Peptide Label: isoform X16
- UniProtKB: A0A287D619 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_040135512   ⟸   XM_040279578
- Peptide Label: isoform X15
- UniProtKB: A0A287D619 (UniProtKB/TrEMBL)
RefSeq Acc Id: ENSSTOP00000029038   ⟸   ENSSTOT00000035223
RefSeq Acc Id: ENSSTOP00000029032   ⟸   ENSSTOT00000042112
RefSeq Acc Id: ENSSTOP00000031914   ⟸   ENSSTOT00000041724
RefSeq Acc Id: ENSSTOP00000010975   ⟸   ENSSTOT00000012245
RefSeq Acc Id: ENSSTOP00000027603   ⟸   ENSSTOT00000036829
RefSeq Acc Id: ENSSTOP00000028823   ⟸   ENSSTOT00000032384
RefSeq Acc Id: ENSSTOP00000028199   ⟸   ENSSTOT00000033187
RefSeq Acc Id: ENSSTOP00000031857   ⟸   ENSSTOT00000042904
Protein Domains
PID   SAM


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSSTOG00000012238 Ensembl, UniProtKB/TrEMBL
Ensembl Transcript ENSSTOT00000012245.3 UniProtKB/TrEMBL
  ENSSTOT00000032384.1 UniProtKB/TrEMBL
  ENSSTOT00000033187.1 UniProtKB/TrEMBL
  ENSSTOT00000035223.1 UniProtKB/TrEMBL
  ENSSTOT00000036829.1 UniProtKB/TrEMBL
  ENSSTOT00000041724.1 UniProtKB/TrEMBL
  ENSSTOT00000042112.1 UniProtKB/TrEMBL
  ENSSTOT00000042904.1 UniProtKB/TrEMBL
Gene3D-CATH 1.10.150.50 UniProtKB/TrEMBL
  1.25.40.20 UniProtKB/TrEMBL
  2.30.29.30 UniProtKB/TrEMBL
InterPro ANKS1/Caskin UniProtKB/TrEMBL
  Ankyrin_rpt UniProtKB/TrEMBL
  Ankyrin_rpt-contain_sf UniProtKB/TrEMBL
  PH-like_dom_sf UniProtKB/TrEMBL
  PTB/PI_dom UniProtKB/TrEMBL
  SAM UniProtKB/TrEMBL
  SAM/pointed_sf UniProtKB/TrEMBL
  SAM_ANKS1_repeat1 UniProtKB/TrEMBL
  SAM_ANKS1_repeat2 UniProtKB/TrEMBL
NCBI Gene Anks1b ENTREZGENE
PANTHER ANKYRIN REPEAT AND STERILE ALPHA MOTIF DOMAIN-CONTAINING PROTEIN 1 UniProtKB/TrEMBL
  PTHR24174:SF3 UniProtKB/TrEMBL
Pfam Ank_2 UniProtKB/TrEMBL
  PID UniProtKB/TrEMBL
  SAM_1 UniProtKB/TrEMBL
PRINTS ANKYRIN UniProtKB/TrEMBL
PROSITE ANK_REP_REGION UniProtKB/TrEMBL
  ANK_REPEAT UniProtKB/TrEMBL
  PID UniProtKB/TrEMBL
  SAM_DOMAIN UniProtKB/TrEMBL
SMART ANK UniProtKB/TrEMBL
  PTB UniProtKB/TrEMBL
  SAM UniProtKB/TrEMBL
Superfamily-SCOP PH domain-like UniProtKB/TrEMBL
  SSF47769 UniProtKB/TrEMBL
  SSF48403 UniProtKB/TrEMBL
UniProt A0A287D223_ICTTR UniProtKB/TrEMBL
  A0A287D3U4_ICTTR UniProtKB/TrEMBL
  A0A287D5J8_ICTTR UniProtKB/TrEMBL
  A0A287D619 ENTREZGENE, UniProtKB/TrEMBL
  A0A287D677_ICTTR UniProtKB/TrEMBL
  A0A287DE79_ICTTR UniProtKB/TrEMBL
  A0A287DEF4 ENTREZGENE, UniProtKB/TrEMBL
  I3MIT2 ENTREZGENE, UniProtKB/TrEMBL