Puf60 (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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HiC_Itri_2 | NW_024405303 | 909,405 - 922,238 (+) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936470 | 8,336,390 - 8,348,609 (+) | Ensembl | SpeTri2.0 | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936470 | 8,336,852 - 8,348,335 (+) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
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PUF60 (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCh38 | 8 | 143,816,344 - 143,829,315 (-) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 8 | 143,816,344 - 143,830,709 (-) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 8 | 144,898,514 - 144,911,485 (-) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 8 | 144,970,535 - 144,983,525 (-) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Build 34 | 8 | 144,970,535 - 144,983,525 | NCBI | | | | | Celera | 8 | 141,211,452 - 141,224,560 (-) | NCBI | | Celera | | | Cytogenetic Map | 8 | q24.3 | NCBI | | | | | HuRef | 8 | 140,151,474 - 140,164,519 (-) | NCBI | | HuRef | | | CHM1_1 | 8 | 144,938,756 - 144,951,801 (-) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 8 | 144,973,042 - 144,986,016 (-) | NCBI | | T2T-CHM13v2.0 | | |
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Puf60 (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCm39 | 15 | 75,942,031 - 75,954,386 (-) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 15 | 75,942,031 - 75,952,773 (-) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 15 | 76,070,182 - 76,082,537 (-) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 15 | 76,070,182 - 76,080,924 (-) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 15 | 75,900,612 - 75,911,376 (-) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 15 | 75,897,439 - 75,908,167 (-) | NCBI | | MGSCv36 | mm8 | | Celera | 15 | 77,571,109 - 77,581,873 (-) | NCBI | | Celera | | | Cytogenetic Map | 15 | D3 | NCBI | | | | | cM Map | 15 | 35.32 | NCBI | | | | |
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Puf60 (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCr8 | 7 | 109,663,490 - 109,674,443 (-) | NCBI | | GRCr8 | | | mRatBN7.2 | 7 | 107,782,799 - 107,793,759 (-) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 7 | 107,782,770 - 107,794,531 (-) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 7 | 109,523,205 - 109,534,132 (-) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 7 | 111,746,882 - 111,757,809 (-) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 7 | 111,703,620 - 111,714,562 (-) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 7 | 117,129,237 - 117,140,234 (-) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 7 | 117,129,237 - 117,140,214 (-) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 7 | 117,114,908 - 117,125,972 (-) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 7 | 114,101,160 - 114,112,091 (-) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | RGSC_v3.1 | 7 | 114,135,433 - 114,146,350 (-) | NCBI | | | | | Celera | 7 | 104,139,368 - 104,150,299 (-) | NCBI | | Celera | | | Cytogenetic Map | 7 | q34 | NCBI | | | | |
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Puf60 (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChiLan1.0 Ensembl | NW_004955454 | 2,482,968 - 2,497,339 (-) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955454 | 2,482,968 - 2,497,339 (-) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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PUF60 (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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NHGRI_mPanPan1-v2 | 7 | 161,302,359 - 161,315,435 (-) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 8 | 136,819,615 - 136,833,130 (-) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 8 | 140,571,688 - 140,584,778 (-) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 8 | 143,583,451 - 143,597,351 (-) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 8 | 143,583,451 - 143,597,399 (-) | Ensembl | panpan1.1 | | panPan2 | |
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PUF60 (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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CanFam3.1 | 13 | 37,375,781 - 37,387,969 (-) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 13 | 37,375,651 - 37,387,875 (-) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 13 | 37,332,030 - 37,344,218 (-) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 13 | 37,847,479 - 37,859,669 (-) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 13 | 37,847,344 - 37,859,609 (-) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 13 | 37,521,566 - 37,533,753 (-) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 13 | 37,638,507 - 37,650,690 (-) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 13 | 38,119,856 - 38,132,044 (-) | NCBI | | UU_Cfam_GSD_1.0 | | |
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PUF60 (Sus scrofa - pig) |
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PUF60 (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChlSab1.1 | 8 | 138,034,526 - 138,047,485 (-) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 8 | 138,034,395 - 138,042,468 (-) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666039 | 1,829,905 - 1,842,943 (+) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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Puf60 (Heterocephalus glaber - naked mole-rat) |
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