Zar1 (zygote arrest 1) - Rat Genome Database

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Gene: Zar1 (zygote arrest 1) Ictidomys tridecemlineatus
Analyze
Symbol: Zar1
Name: zygote arrest 1
RGD ID: 12522738
Description: ENCODES a protein that exhibits molecular condensate scaffold activity (inferred); mRNA 3'-UTR binding (inferred); mRNA binding (inferred); INVOLVED IN mRNA stabilization (inferred); negative regulation of translation (inferred); non-membrane-bounded organelle assembly (inferred); ASSOCIATED WITH genetic disease (ortholog); FOUND IN cytoplasm (ortholog); intracellular non-membrane-bounded organelle (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: LOC110597644; uncharacterized LOC110597644; zygote arrest protein 1
RGD Orthologs
Human
Mouse
Rat
Bonobo
Dog
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: SpeTri2.0 - Squirrel SpeTri2.0 Assembly
Position:
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440528531,781,714 - 31,795,486 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493648214,503,197 - 14,507,183 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_00493648214,502,680 - 14,510,023 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:30032202  


Genomics

Comparative Map Data
Zar1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440528531,781,714 - 31,795,486 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493648214,503,197 - 14,507,183 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_00493648214,502,680 - 14,510,023 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ZAR1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38448,490,252 - 48,497,635 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl448,490,252 - 48,494,389 (+)EnsemblGRCh38hg38GRCh38
GRCh37448,492,269 - 48,496,406 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36448,187,066 - 48,191,181 (+)NCBINCBI36Build 36hg18NCBI36
Build 34448,333,236 - 48,337,348NCBI
Celera448,941,100 - 48,945,109 (+)NCBICelera
Cytogenetic Map4p11NCBI
HuRef447,812,310 - 47,816,447 (+)NCBIHuRef
CHM1_1448,491,424 - 48,495,561 (+)NCBICHM1_1
T2T-CHM13v2.0448,457,286 - 48,465,127 (+)NCBIT2T-CHM13v2.0
Zar1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39572,734,457 - 72,738,427 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl572,734,149 - 72,738,597 (-)EnsemblGRCm39 Ensembl
GRCm38572,577,113 - 72,581,361 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl572,576,806 - 72,581,254 (-)EnsemblGRCm38mm10GRCm38
MGSCv37572,968,353 - 72,972,323 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36572,856,249 - 72,860,219 (-)NCBIMGSCv36mm8
Celera569,825,570 - 69,829,543 (-)NCBICelera
Cytogenetic Map5C3.2NCBI
cM Map538.44NCBI
Zar1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81435,547,467 - 35,551,757 (-)NCBIGRCr8
mRatBN7.21435,193,446 - 35,197,382 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1435,193,446 - 35,197,382 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1435,557,323 - 35,561,262 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01436,862,080 - 36,866,019 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01435,350,406 - 35,354,345 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01437,757,579 - 37,764,389 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1437,759,776 - 37,763,712 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01437,570,281 - 37,574,217 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41437,598,421 - 37,602,357 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11437,600,855 - 37,604,792 (-)NCBI
Celera1434,448,509 - 34,452,445 (-)NCBICelera
Cytogenetic Map14p11NCBI
ZAR1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2379,367,224 - 79,374,553 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1479,628,838 - 79,636,039 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0473,655,842 - 73,663,037 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1484,386,344 - 84,390,005 (-)NCBIpanpan1.1PanPan1.1panPan2
ZAR1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11344,301,690 - 44,307,188 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1344,252,794 - 44,257,490 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01344,903,436 - 44,907,993 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1344,904,428 - 44,907,984 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11344,577,962 - 44,582,609 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01344,114,292 - 44,117,682 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01344,993,008 - 44,997,709 (+)NCBIUU_Cfam_GSD_1.0
ZAR1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl838,386,643 - 38,391,611 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1838,386,520 - 38,391,618 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2840,420,104 - 40,425,070 (+)NCBISscrofa10.2Sscrofa10.2susScr3
ZAR1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1271,745,297 - 1,762,724 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl271,758,050 - 1,762,016 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366604747,756,823 - 47,765,472 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Zar1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462476118,485,440 - 18,488,882 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462476118,485,286 - 18,488,988 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSSTOT00000033305   ⟹   ENSSTOP00000028103
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
SpeTri2.0 EnsemblNW_00493648214,503,197 - 14,507,183 (+)Ensembl
RefSeq Acc Id: ENSSTOT00000035646   ⟹   ENSSTOP00000028015
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
SpeTri2.0 EnsemblNW_00493648214,503,604 - 14,507,183 (+)Ensembl
RefSeq Acc Id: XM_040292464   ⟹   XP_040148398
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440528531,781,714 - 31,794,787 (-)NCBI
RefSeq Acc Id: XM_040292465   ⟹   XP_040148399
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440528531,781,714 - 31,795,486 (-)NCBI
Protein Sequences
Protein RefSeqs XP_040148398 (Get FASTA)   NCBI Sequence Viewer  
  XP_040148399 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSSTOP00000028015.1
  ENSSTOP00000028103.1
GenBank Protein KAG3276659 (Get FASTA)   NCBI Sequence Viewer  
Reference Protein Sequences
RefSeq Acc Id: XP_040148399   ⟸   XM_040292465
- Peptide Label: isoform X2
- UniProtKB: A0A287D3H1 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_040148398   ⟸   XM_040292464
- Peptide Label: isoform X1
- UniProtKB: A0A287D3H1 (UniProtKB/TrEMBL)
RefSeq Acc Id: ENSSTOP00000028015   ⟸   ENSSTOT00000035646
RefSeq Acc Id: ENSSTOP00000028103   ⟸   ENSSTOT00000033305
Protein Domains
3CxxC-type


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSSTOG00000031847 Ensembl, UniProtKB/TrEMBL
Ensembl Transcript ENSSTOT00000033305.1 UniProtKB/TrEMBL
  ENSSTOT00000035646.1 UniProtKB/TrEMBL
InterPro Zar1 UniProtKB/TrEMBL
  Znf-3CxxC UniProtKB/TrEMBL
NCBI Gene Zar1 ENTREZGENE
PANTHER PTHR31054 UniProtKB/TrEMBL
  ZYGOTE ARREST PROTEIN 1 UniProtKB/TrEMBL
Pfam zf-3CxxC UniProtKB/TrEMBL
SMART zf-3CxxC UniProtKB/TrEMBL
UniProt A0A287D3C2_ICTTR UniProtKB/TrEMBL
  A0A287D3H1 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2021-03-25 Zar1  zygote arrest 1  LOC110597644  uncharacterized LOC110597644  Data merged from RGD:13112520 737654 PROVISIONAL