Ccdc194 (coiled-coil domain containing 194) - Rat Genome Database

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Gene: Ccdc194 (coiled-coil domain containing 194) Ictidomys tridecemlineatus
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Symbol: Ccdc194
Name: coiled-coil domain containing 194
RGD ID: 12519809
Description: INVOLVED IN innate immune response (ortholog); negative regulation of intracellular transport of viral material (ortholog); negative regulation of viral genome replication (ortholog); ASSOCIATED WITH brain glioma (ortholog); chikungunya (ortholog); Mammary Neoplasms, Experimental (ortholog); FOUND IN apical plasma membrane (ortholog); cell surface (ortholog); intracellular anatomical structure (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Also known as: bone marrow stromal antigen 2; bone marrow stromal cell antigen 2; Bst2; coiled-coil domain-containing protein 194; LOC101967308
RGD Orthologs
Human
Mouse
Rat
Dog
Alliance Genes
More Info more info ...
Latest Assembly: SpeTri2.0 - Squirrel SpeTri2.0 Assembly
Position:
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405118203,948,837 - 203,952,227 (+)NCBI
SpeTri2.0NW_0049365963,492,733 - 3,501,347 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References

Genomics

Comparative Map Data
Ccdc194
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405118203,948,837 - 203,952,227 (+)NCBI
SpeTri2.0NW_0049365963,492,733 - 3,501,347 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
CCDC194
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl1917,390,509 - 17,394,158 (-)EnsemblGRCh38hg38GRCh38
GRCh381917,389,069 - 17,394,593 (-)NCBIGRCh38GRCh38hg38GRCh38
Cytogenetic Map19p13.11NCBI
Bst2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39871,986,899 - 71,990,116 (-)NCBIGRCm39mm39
GRCm39 Ensembl871,986,899 - 71,990,100 (-)Ensembl
GRCm38871,534,255 - 71,537,472 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl871,534,255 - 71,537,456 (-)EnsemblGRCm38mm10GRCm38
MGSCv37874,058,158 - 74,061,336 (-)NCBIGRCm37mm9NCBIm37
MGSCv36874,463,248 - 74,466,427 (-)NCBImm8
Celera874,044,534 - 74,047,712 (-)NCBICelera
Cytogenetic Map8B3.3NCBI
Bst2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.21618,217,404 - 18,220,979 (-)NCBImRatBN7.2
mRatBN7.2 Ensembl1618,217,407 - 18,220,979 (-)Ensembl
Rnor_6.01619,938,781 - 19,942,353 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1619,938,784 - 19,942,353 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01619,800,345 - 19,803,919 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41618,698,545 - 18,701,768 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11618,698,545 - 18,701,766 (-)NCBI
Celera1618,422,354 - 18,425,936 (-)NCBICelera
Cytogenetic Map16p14NCBI
BST2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12045,383,757 - 45,387,420 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2045,383,915 - 45,387,178 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2045,297,396 - 45,301,618 (+)NCBI
ROS_Cfam_1.02045,870,847 - 45,875,081 (+)NCBI
UMICH_Zoey_3.12045,107,273 - 45,111,493 (+)NCBI
UNSW_CanFamBas_1.02045,517,170 - 45,521,565 (+)NCBI
UU_Cfam_GSD_1.02045,793,007 - 45,797,236 (+)NCBI


Expression


Sequence


Reference Sequences
RefSeq Acc Id: XM_021731422   ⟹   XP_021587097
RefSeq Status:
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
SpeTri2.0NW_0049365963,492,733 - 3,501,347 (+)NCBI
Sequence:
RefSeq Acc Id: XM_040290977   ⟹   XP_040146911
RefSeq Status:
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_024405118203,948,837 - 203,952,227 (+)NCBI
Protein Sequences
Protein RefSeqs XP_040146911 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein KAG3279963 (Get FASTA)   NCBI Sequence Viewer  
Reference Sequences
RefSeq Acc Id: XP_021587097   ⟸   XM_021731422
- Sequence:
RefSeq Acc Id: XP_040146911   ⟸   XM_040290977


Additional Information

Database Acc Id Source(s)
NCBI Gene Bst2 ENTREZGENE


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2021-03-26 Ccdc194  coiled-coil domain containing 194  LOC101967308  bone marrow stromal antigen 2  Symbol and/or name change 5135510 APPROVED
2017-07-13 LOC101967308  bone marrow stromal antigen 2  Bst2  bone marrow stromal cell antigen 2  Symbol and/or name change 5135510 APPROVED