Igfals (insulin like growth factor binding protein acid labile subunit) - Rat Genome Database
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Gene: Igfals (insulin like growth factor binding protein acid labile subunit) Ictidomys tridecemlineatus
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Symbol: Igfals
Name: insulin like growth factor binding protein acid labile subunit
RGD ID: 12519188
Description: ENCODES a protein that exhibits insulin-like growth factor binding (ortholog); INVOLVED IN aging (ortholog); cellular response to dexamethasone stimulus (ortholog); cellular response to epidermal growth factor stimulus (ortholog); PARTICIPATES IN insulin-like growth factor signaling pathway; ASSOCIATED WITH Acid-Labile Subunit Deficiency (ortholog); anorexia nervosa (ortholog); Burns (ortholog); FOUND IN insulin-like growth factor ternary complex (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Also known as: insulin-like growth factor-binding protein complex acid labile subunit
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: SpeTri2.0 - Squirrel SpeTri2.0 Assembly
NCBI Annotation Information: Annotation category: partial on reference assembly
Position:
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
SpeTri2.0NW_0049366942,205,294 - 2,207,343 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

Molecular Pathway Annotations     Click to see Annotation Detail View
References

Genomics

Comparative Map Data
Igfals
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
SpeTri2.0NW_0049366942,205,294 - 2,207,343 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
IGFALS
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl161,790,413 - 1,794,971 (-)EnsemblGRCh38hg38GRCh38
GRCh38161,790,413 - 1,794,908 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh37161,840,414 - 1,844,909 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36161,780,420 - 1,783,710 (-)NCBINCBI36hg18NCBI36
Build 34161,780,421 - 1,783,710NCBI
Celera162,052,696 - 2,057,191 (-)NCBI
Cytogenetic Map16p13.3NCBI
HuRef161,763,315 - 1,767,810 (-)NCBIHuRef
CHM1_1161,840,362 - 1,844,857 (-)NCBICHM1_1
Igfals
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391725,096,818 - 25,100,985 (+)NCBIGRCm39mm39
GRCm381724,877,844 - 24,882,011 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1724,865,997 - 24,882,010 (+)EnsemblGRCm38mm10GRCm38
MGSCv371725,015,715 - 25,018,953 (+)NCBIGRCm37mm9NCBIm37
MGSCv361724,606,370 - 24,609,608 (+)NCBImm8
Celera1725,405,538 - 25,408,777 (+)NCBICelera
Cytogenetic Map17A3.3NCBI
cM Map1712.53NCBI
Igfals
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01014,240,308 - 14,243,554 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1014,240,219 - 14,243,597 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01014,056,324 - 14,059,570 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41014,127,416 - 14,130,662 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11014,127,516 - 14,130,444 (+)NCBI
Celera1013,578,539 - 13,581,785 (+)NCBICelera
Cytogenetic Map10q12NCBI
Igfals
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495544215,478,202 - 15,482,115 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495544215,469,602 - 15,482,115 (+)NCBIChiLan1.0ChiLan1.0
IGFALS
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.1161,843,979 - 1,847,313 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl161,843,979 - 1,848,442 (-)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v016412,671 - 418,351 (-)NCBIMhudiblu_PPA_v0panPan3
IGFALS
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1 Ensembl639,114,315 - 39,119,652 (+)EnsemblCanFam3.1canFam3CanFam3.1
CanFam3.1639,115,744 - 39,118,831 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
IGFALS
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl340,174,764 - 40,177,785 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1340,173,595 - 40,177,789 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2341,634,233 - 41,640,585 (-)NCBISscrofa10.2Sscrofa10.2susScr3
IGFALS
(Chlorocebus sabaeus - African green monkey)
Vervet AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.151,698,787 - 1,704,205 (-)NCBI
ChlSab1.1 Ensembl51,698,978 - 1,701,972 (-)Ensembl
Igfals
(Heterocephalus glaber - naked mole-rat)
Molerat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_004624913460,862 - 464,457 (+)NCBI


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts XM_021734973 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AGTP01095365 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: XM_021734973   ⟹   XP_021590648
RefSeq Status:
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
SpeTri2.0NW_0049366942,205,294 - 2,207,343 (+)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_021590648 (Get FASTA)   NCBI Sequence Viewer  
Reference Sequences
RefSeq Acc Id: XP_021590648   ⟸   XM_021734973
- Sequence:


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSSTOG00000027057 UniProtKB/TrEMBL
Ensembl Protein ENSSTOP00000016748 UniProtKB/TrEMBL
Ensembl Transcript ENSSTOT00000026261 UniProtKB/TrEMBL
Gene3D-CATH 3.80.10.10 UniProtKB/TrEMBL
InterPro Cys-rich_flank_reg_C UniProtKB/TrEMBL
  Leu-rich_rpt UniProtKB/TrEMBL
  Leu-rich_rpt_typical-subtyp UniProtKB/TrEMBL
  LRR_dom_sf UniProtKB/TrEMBL
  LRRNT UniProtKB/TrEMBL
NCBI Gene Igfals ENTREZGENE
Pfam LRR_1 UniProtKB/TrEMBL
  LRR_8 UniProtKB/TrEMBL
  LRRNT UniProtKB/TrEMBL
PROSITE LRR UniProtKB/TrEMBL
SMART LRR_TYP UniProtKB/TrEMBL
  LRRCT UniProtKB/TrEMBL
  LRRNT UniProtKB/TrEMBL
UniProt I3MXA3_ICTTR UniProtKB/TrEMBL