Dnm2 (dynamin 2) - Rat Genome Database

Send us a Message



Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Gene: Dnm2 (dynamin 2) Ictidomys tridecemlineatus
Analyze
Symbol: Dnm2
Name: dynamin 2
RGD ID: 12515693
Description: ENCODES a protein that exhibits D2 dopamine receptor binding (ortholog); GTPase activity (ortholog); nitric-oxide synthase binding (ortholog); INVOLVED IN aorta development (ortholog); cellular response to carbon monoxide (ortholog); cellular response to dopamine (ortholog); PARTICIPATES IN platelet-derived growth factor signaling pathway; syndecan signaling pathway; vascular endothelial growth factor signaling pathway; ASSOCIATED WITH centronuclear myopathy (ortholog); centronuclear myopathy 1 (ortholog); centronuclear myopathy X-linked (ortholog); FOUND IN cell cortex (ortholog); cell junction (ortholog); centrosome (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Also known as: dynamin 2, transcript variant X1; dynamin 2, transcript variant X10; dynamin 2, transcript variant X11; dynamin 2, transcript variant X12; dynamin 2, transcript variant X13; dynamin 2, transcript variant X2; dynamin 2, transcript variant X3; dynamin 2, transcript variant X4; dynamin 2, transcript variant X5; dynamin 2, transcript variant X6; dynamin 2, transcript variant X7; dynamin 2, transcript variant X8; dynamin 2, transcript variant X9; dynamin-2
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: SpeTri2.0 - Squirrel SpeTri2.0 Assembly
Position:
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405118209,308,313 - 209,397,278 (-)NCBI
SpeTri2.0NW_004936659957,408 - 1,046,393 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Molecular Pathway Annotations     Click to see Annotation Detail View
References

Genomics

Comparative Map Data
Dnm2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405118209,308,313 - 209,397,278 (-)NCBI
SpeTri2.0NW_004936659957,408 - 1,046,393 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
DNM2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl1910,718,055 - 10,833,488 (+)EnsemblGRCh38hg38GRCh38
GRCh381910,718,079 - 10,831,903 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh371910,828,755 - 10,942,579 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361910,689,755 - 10,803,579 (+)NCBINCBI36hg18NCBI36
Build 341910,689,754 - 10,803,579NCBI
Celera1910,723,575 - 10,837,431 (+)NCBI
Cytogenetic Map19p13.2NCBI
HuRef1910,405,937 - 10,520,718 (+)NCBIHuRef
CHM1_11910,829,940 - 10,943,823 (+)NCBICHM1_1
Dnm2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39921,336,167 - 21,419,055 (+)NCBIGRCm39mm39
GRCm39 Ensembl921,336,204 - 21,419,055 (+)Ensembl
GRCm38921,424,908 - 21,507,759 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl921,424,908 - 21,507,759 (+)EnsemblGRCm38mm10GRCm38
MGSCv37921,229,389 - 21,311,568 (+)NCBIGRCm37mm9NCBIm37
MGSCv36921,175,347 - 21,257,526 (+)NCBImm8
Celera918,693,560 - 18,775,727 (+)NCBICelera
Cytogenetic Map9A3NCBI
cM Map97.79NCBI
Dnm2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.2819,978,313 - 20,060,162 (+)NCBImRatBN7.2
mRatBN7.2 Ensembl819,978,400 - 20,060,157 (+)Ensembl
Rnor_6.0822,458,869 - 22,540,649 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl822,458,899 - 22,540,524 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0822,512,875 - 22,594,760 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4820,527,130 - 20,610,749 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1820,527,130 - 20,610,749 (+)NCBI
Celera821,369,673 - 21,450,772 (+)NCBICelera
Cytogenetic Map8q13NCBI
Dnm2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554951,860,644 - 1,934,818 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554951,860,644 - 1,934,589 (+)NCBIChiLan1.0ChiLan1.0
DNM2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.11910,974,699 - 11,107,354 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1910,933,672 - 11,106,478 (+)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v01910,272,172 - 10,386,032 (+)NCBIMhudiblu_PPA_v0panPan3
DNM2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12050,398,866 - 50,487,303 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2050,398,864 - 50,487,241 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2050,271,460 - 50,359,936 (-)NCBI
ROS_Cfam_1.02050,920,493 - 51,009,858 (-)NCBI
UMICH_Zoey_3.12050,129,310 - 50,218,400 (-)NCBI
UNSW_CanFamBas_1.02050,556,853 - 50,645,731 (-)NCBI
UU_Cfam_GSD_1.02050,798,300 - 50,886,770 (-)NCBI
DNM2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl269,474,031 - 69,574,424 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1269,474,011 - 69,574,427 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2269,941,439 - 70,005,977 (+)NCBISscrofa10.2Sscrofa10.2susScr3
DNM2
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.169,718,014 - 9,830,061 (+)NCBI
ChlSab1.1 Ensembl69,718,244 - 9,831,206 (+)Ensembl
Vero_WHO_p1.0NW_02366607410,123,763 - 10,234,870 (-)NCBI
Dnm2
(Heterocephalus glaber - naked mole-rat)
Naked Mole-rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046248282,727,136 - 2,805,248 (+)NCBI


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts XM_005336143 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_005336144 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_005336145 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_005336146 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_005336148 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_005336149 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_005336150 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021733863 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021733864 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021733865 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021733866 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021733867 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021733868 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_040290448 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_040290449 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_040290450 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_040290451 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_040290452 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_040290453 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide JAESOR010000177 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: XM_005336143   ⟹   XP_005336200
RefSeq Status:
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_024405118209,309,141 - 209,397,278 (-)NCBI
SpeTri2.0NW_004936659957,408 - 1,045,567 (+)NCBI
Sequence:
RefSeq Acc Id: XM_005336144   ⟹   XP_005336201
RefSeq Status:
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_024405118209,309,141 - 209,397,278 (-)NCBI
SpeTri2.0NW_004936659957,408 - 1,045,567 (+)NCBI
Sequence:
RefSeq Acc Id: XM_005336145   ⟹   XP_005336202
RefSeq Status:
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_024405118209,309,141 - 209,397,278 (-)NCBI
SpeTri2.0NW_004936659957,408 - 1,045,567 (+)NCBI
Sequence:
RefSeq Acc Id: XM_005336146   ⟹   XP_005336203
RefSeq Status:
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_024405118209,309,141 - 209,397,278 (-)NCBI
SpeTri2.0NW_004936659957,408 - 1,045,567 (+)NCBI
Sequence:
RefSeq Acc Id: XM_005336148   ⟹   XP_005336205
RefSeq Status:
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_024405118209,309,141 - 209,397,278 (-)NCBI
SpeTri2.0NW_004936659957,408 - 1,045,567 (+)NCBI
Sequence:
RefSeq Acc Id: XM_005336149   ⟹   XP_005336206
RefSeq Status:
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_024405118209,309,141 - 209,397,278 (-)NCBI
SpeTri2.0NW_004936659957,408 - 1,045,567 (+)NCBI
Sequence:
RefSeq Acc Id: XM_005336150   ⟹   XP_005336207
RefSeq Status:
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_024405118209,308,313 - 209,397,278 (-)NCBI
SpeTri2.0NW_004936659957,408 - 1,046,393 (+)NCBI
Sequence:
RefSeq Acc Id: XM_021733863   ⟹   XP_021589538
RefSeq Status:
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_024405118209,309,141 - 209,397,255 (-)NCBI
SpeTri2.0NW_004936659957,412 - 1,045,567 (+)NCBI
Sequence:
RefSeq Acc Id: XM_021733864   ⟹   XP_021589539
RefSeq Status:
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_024405118209,309,141 - 209,397,255 (-)NCBI
SpeTri2.0NW_004936659957,412 - 1,045,567 (+)NCBI
Sequence:
RefSeq Acc Id: XM_021733868   ⟹   XP_021589543
RefSeq Status:
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_024405118209,309,141 - 209,397,278 (-)NCBI
SpeTri2.0NW_004936659957,408 - 1,045,567 (+)NCBI
Sequence:
RefSeq Acc Id: XM_040290448   ⟹   XP_040146382
RefSeq Status:
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_024405118209,309,141 - 209,397,257 (-)NCBI
RefSeq Acc Id: XM_040290449   ⟹   XP_040146383
RefSeq Status:
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_024405118209,309,141 - 209,397,255 (-)NCBI
RefSeq Acc Id: XM_040290450   ⟹   XP_040146384
RefSeq Status:
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_024405118209,308,313 - 209,397,257 (-)NCBI
RefSeq Acc Id: XM_040290451   ⟹   XP_040146385
RefSeq Status:
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_024405118209,308,313 - 209,397,278 (-)NCBI
RefSeq Acc Id: XM_040290452   ⟹   XP_040146386
RefSeq Status:
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_024405118209,308,313 - 209,397,278 (-)NCBI
RefSeq Acc Id: XM_040290453   ⟹   XP_040146387
RefSeq Status:
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_024405118209,308,313 - 209,397,278 (-)NCBI
Protein Sequences
Protein RefSeqs XP_005336200 (Get FASTA)   NCBI Sequence Viewer  
  XP_005336201 (Get FASTA)   NCBI Sequence Viewer  
  XP_005336202 (Get FASTA)   NCBI Sequence Viewer  
  XP_005336203 (Get FASTA)   NCBI Sequence Viewer  
  XP_005336205 (Get FASTA)   NCBI Sequence Viewer  
  XP_005336206 (Get FASTA)   NCBI Sequence Viewer  
  XP_005336207 (Get FASTA)   NCBI Sequence Viewer  
  XP_021589538 (Get FASTA)   NCBI Sequence Viewer  
  XP_021589539 (Get FASTA)   NCBI Sequence Viewer  
  XP_021589543 (Get FASTA)   NCBI Sequence Viewer  
  XP_040146382 (Get FASTA)   NCBI Sequence Viewer  
  XP_040146383 (Get FASTA)   NCBI Sequence Viewer  
  XP_040146384 (Get FASTA)   NCBI Sequence Viewer  
  XP_040146385 (Get FASTA)   NCBI Sequence Viewer  
  XP_040146386 (Get FASTA)   NCBI Sequence Viewer  
  XP_040146387 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein KAG3280301 (Get FASTA)   NCBI Sequence Viewer  
  KAG3280302 (Get FASTA)   NCBI Sequence Viewer  
  KAG3280303 (Get FASTA)   NCBI Sequence Viewer  
  KAG3280304 (Get FASTA)   NCBI Sequence Viewer  
  KAG3280305 (Get FASTA)   NCBI Sequence Viewer  
  KAG3280306 (Get FASTA)   NCBI Sequence Viewer  
  KAG3280307 (Get FASTA)   NCBI Sequence Viewer  
  KAG3280308 (Get FASTA)   NCBI Sequence Viewer  
  KAG3280309 (Get FASTA)   NCBI Sequence Viewer  
  KAG3280310 (Get FASTA)   NCBI Sequence Viewer  
  KAG3280311 (Get FASTA)   NCBI Sequence Viewer  
  KAG3280312 (Get FASTA)   NCBI Sequence Viewer  
  KAG3280313 (Get FASTA)   NCBI Sequence Viewer  
Reference Sequences
RefSeq Acc Id: XP_005336207   ⟸   XM_005336150
- Peptide Label: isoform X14
- Sequence:
RefSeq Acc Id: XP_005336202   ⟸   XM_005336145
- Peptide Label: isoform X9
- Sequence:
RefSeq Acc Id: XP_005336200   ⟸   XM_005336143
- Peptide Label: isoform X6
- UniProtKB: I3N385 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_005336205   ⟸   XM_005336148
- Peptide Label: isoform X11
- UniProtKB: A0A287D8N2 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_005336201   ⟸   XM_005336144
- Peptide Label: isoform X5
- UniProtKB: I3MZB5 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_005336203   ⟸   XM_005336146
- Peptide Label: isoform X8
- Sequence:
RefSeq Acc Id: XP_005336206   ⟸   XM_005336149
- Peptide Label: isoform X10
- Sequence:
RefSeq Acc Id: XP_021589543   ⟸   XM_021733868
- Peptide Label: isoform X12
- Sequence:
RefSeq Acc Id: XP_021589538   ⟸   XM_021733863
- Peptide Label: isoform X2
- Sequence:
RefSeq Acc Id: XP_021589539   ⟸   XM_021733864
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_040146386   ⟸   XM_040290452
- Peptide Label: isoform X15
RefSeq Acc Id: XP_040146385   ⟸   XM_040290451
- Peptide Label: isoform X13
RefSeq Acc Id: XP_040146387   ⟸   XM_040290453
- Peptide Label: isoform X16
RefSeq Acc Id: XP_040146384   ⟸   XM_040290450
- Peptide Label: isoform X7
RefSeq Acc Id: XP_040146382   ⟸   XM_040290448
- Peptide Label: isoform X3
RefSeq Acc Id: XP_040146383   ⟸   XM_040290449
- Peptide Label: isoform X4


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSSTOG00000007826 ENTREZGENE
Ensembl Protein ENSSTOP00000017461 ENTREZGENE
  ENSSTOP00000018831 ENTREZGENE
  ENSSTOP00000029898 ENTREZGENE
NCBI Gene Dnm2 ENTREZGENE
UniProt A0A287D8N2 ENTREZGENE
  I3MZB5 ENTREZGENE
  I3N385 ENTREZGENE