Fut7 (fucosyltransferase 7) - Rat Genome Database

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Gene: Fut7 (fucosyltransferase 7) Ictidomys tridecemlineatus
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Symbol: Fut7
Name: fucosyltransferase 7
RGD ID: 12511364
Description: ENCODES a protein that exhibits 4-galactosyl-N-acetylglucosaminide 3-alpha-L-fucosyltransferase activity (inferred); alpha-(1->3)-fucosyltransferase activity (inferred); fucosyltransferase activity (inferred); INVOLVED IN CD4-positive, CD25-positive, alpha-beta regulatory T cell differentiation (ortholog); inflammatory response (ortholog); leukocyte migration involved in immune response (ortholog); ASSOCIATED WITH autosomal dominant intellectual developmental disorder 8 (ortholog); autosomal dominant nocturnal frontal lobe epilepsy 5 (ortholog); developmental and epileptic encephalopathy 14 (ortholog); FOUND IN Golgi apparatus (inferred); Golgi cisterna membrane (inferred); integral component of membrane (inferred)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: alpha-(1,3)-fucosyltransferase 7
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: SpeTri2.0 - Squirrel SpeTri2.0 Assembly
Position:
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024404947202,448,245 - 202,456,791 (-)NCBI
SpeTri2.0NW_004936669914,520 - 920,481 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

References

Genomics

Comparative Map Data
Fut7
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024404947202,448,245 - 202,456,791 (-)NCBI
SpeTri2.0NW_004936669914,520 - 920,481 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
FUT7
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh389137,030,174 - 137,032,088 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p13 Ensembl9137,030,174 - 137,032,088 (-)EnsemblGRCh38hg38GRCh38
GRCh379139,924,626 - 139,926,540 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 369139,044,447 - 139,047,283 (-)NCBINCBI36hg18NCBI36
Build 349137,200,462 - 137,203,299NCBI
Cytogenetic Map9q34.3NCBI
HuRef9109,383,478 - 109,386,144 (-)NCBIHuRef
CHM1_19140,073,389 - 140,076,055 (-)NCBICHM1_1
T2T-CHM13v2.09149,264,609 - 149,266,523 (-)NCBI
Fut7
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39225,312,363 - 25,316,386 (+)NCBIGRCm39mm39
GRCm39 Ensembl225,313,279 - 25,316,386 (+)Ensembl
GRCm38225,422,351 - 25,426,374 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl225,423,267 - 25,426,374 (+)EnsemblGRCm38mm10GRCm38
MGSCv37225,279,214 - 25,281,894 (+)NCBIGRCm37mm9NCBIm37
MGSCv36225,245,293 - 25,248,380 (+)NCBImm8
Celera225,151,205 - 25,153,885 (+)NCBICelera
Cytogenetic Map2A3NCBI
Fut7
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.238,237,687 - 8,242,273 (+)NCBImRatBN7.2
mRatBN7.2 Ensembl38,239,384 - 8,242,260 (+)Ensembl
Rnor_6.032,637,281 - 2,646,497 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl32,642,531 - 2,646,648 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.032,623,653 - 2,628,513 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.433,590,174 - 3,593,046 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.133,590,173 - 3,593,045 (+)NCBI
Celera33,064,494 - 3,067,366 (+)NCBICelera
Cytogenetic Map3p13NCBI
Fut7
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0NW_0049555135,056,718 - 5,061,974 (-)NCBIChiLan1.0ChiLan1.0
FUT7
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.19137,058,831 - 137,061,607 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl9137,058,831 - 137,061,607 (-)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v09108,090,793 - 108,093,513 (-)NCBIMhudiblu_PPA_v0panPan3
FUT7
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1948,604,879 - 48,609,292 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl948,606,435 - 48,609,303 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha947,821,203 - 47,822,270 (+)NCBI
ROS_Cfam_1.0949,483,176 - 49,487,261 (+)NCBI
ROS_Cfam_1.0 Ensembl949,485,443 - 49,487,254 (+)Ensembl
UMICH_Zoey_3.1948,261,839 - 48,262,906 (+)NCBI
UNSW_CanFamBas_1.0948,560,576 - 48,561,643 (+)NCBI
UU_Cfam_GSD_1.0948,607,910 - 48,608,977 (+)NCBI
FUT7
(Sus scrofa - pig)
No map positions available.
FUT7
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1121,158,353 - 1,160,913 (+)NCBIChlSab1.1chlSab2
Vero_WHO_p1.0NW_0236660584,141,161 - 4,143,999 (-)NCBIVero_WHO_p1.0
Fut7
(Heterocephalus glaber - naked mole-rat)
Naked Mole-rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_004624760876,059 - 877,574 (+)EnsemblHetGla_female_1.0hetGla2
HetGla 1.0NW_004624760876,048 - 877,984 (+)NCBIHetGla_female_1.0hetGla2


Expression


Sequence


Reference Sequences
RefSeq Acc Id: XM_013363576   ⟹   XP_013219030
RefSeq Status:
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
SpeTri2.0NW_004936669914,520 - 920,481 (+)NCBI
Sequence:
RefSeq Acc Id: XM_040286690   ⟹   XP_040142624
RefSeq Status:
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_024404947202,448,245 - 202,456,791 (-)NCBI
Protein Sequences
Protein RefSeqs XP_040142624 (Get FASTA)   NCBI Sequence Viewer  
Reference Sequences
RefSeq Acc Id: XP_013219030   ⟸   XM_013363576
- Sequence:
RefSeq Acc Id: XP_040142624   ⟸   XM_040286690
Protein Domains
Glyco_tran_10_N


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSSTOG00000013862 UniProtKB/TrEMBL
Ensembl Protein ENSSTOP00000016447.2 UniProtKB/TrEMBL
Ensembl Transcript ENSSTOT00000013863.3 UniProtKB/TrEMBL
Gene3D-CATH 3.40.50.11660 UniProtKB/TrEMBL
InterPro Glyco_tran_10_N UniProtKB/TrEMBL
  Glyco_trans_10 UniProtKB/TrEMBL
  GT10-like_C_sf UniProtKB/TrEMBL
NCBI Gene Fut7 ENTREZGENE
PANTHER PTHR11929 UniProtKB/TrEMBL
Pfam Glyco_tran_10_N UniProtKB/TrEMBL
  Glyco_transf_10 UniProtKB/TrEMBL
UniProt I3MWF2_ICTTR UniProtKB/TrEMBL