Magt1 (magnesium transporter 1) - Rat Genome Database

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Gene: Magt1 (magnesium transporter 1) Ictidomys tridecemlineatus
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Symbol: Magt1
Name: magnesium transporter 1
RGD ID: 12507958
Description: ENCODES a protein that exhibits magnesium ion transmembrane transporter activity (ortholog); INVOLVED IN cognition (ortholog); magnesium ion transport (ortholog); protein N-linked glycosylation (ortholog); ASSOCIATED WITH autistic disorder (ortholog); congenital disorder of glycosylation (ortholog); congenital disorder of glycosylation Icc (ortholog); FOUND IN endoplasmic reticulum (ortholog); oligosaccharyltransferase complex (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Also known as: magnesium transporter protein 1
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: SpeTri2.0 - Squirrel SpeTri2.0 Assembly
Position:
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2X42,172,097 - 42,212,171 (+)NCBI
SpeTri2.0NW_0049366832,737,545 - 2,775,679 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References

Genomics

Comparative Map Data
Magt1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2X42,172,097 - 42,212,171 (+)NCBI
SpeTri2.0NW_0049366832,737,545 - 2,775,679 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
MAGT1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 EnsemblX77,825,747 - 77,895,593 (-)EnsemblGRCh38hg38GRCh38
GRCh38X77,825,747 - 77,895,568 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh37X77,081,244 - 77,151,065 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36X76,968,517 - 77,037,583 (-)NCBINCBI36hg18NCBI36
Build 34X76,888,006 - 76,957,072NCBI
CeleraX77,322,738 - 77,391,930 (-)NCBI
Cytogenetic MapXq21.1NCBI
HuRefX70,668,637 - 70,736,760 (-)NCBIHuRef
CHM1_1X76,974,589 - 77,043,753 (-)NCBICHM1_1
Magt1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39X105,011,690 - 105,055,408 (-)NCBIGRCm39mm39
GRCm39 EnsemblX105,011,690 - 105,055,512 (-)Ensembl
GRCm38X105,968,084 - 106,011,802 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 EnsemblX105,968,084 - 106,011,906 (-)EnsemblGRCm38mm10GRCm38
MGSCv37X103,163,423 - 103,207,238 (-)NCBIGRCm37mm9NCBIm37
MGSCv36X102,172,936 - 102,214,495 (-)NCBImm8
CeleraX92,821,884 - 92,865,614 (-)NCBICelera
Cytogenetic MapXDNCBI
Magt1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.2X71,038,489 - 71,079,704 (-)NCBI
Rnor_6.0 EnsemblX77,020,402 - 77,061,667 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.0X77,023,423 - 77,061,603 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0X56,146,028 - 56,184,208 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4X94,095,479 - 94,133,659 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1X94,168,934 - 94,207,092 (-)NCBI
CeleraX72,353,918 - 72,392,096 (-)NCBICelera
Cytogenetic MapXq22NCBI
Magt1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049555571,290,615 - 1,336,198 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049555571,294,408 - 1,336,164 (-)NCBIChiLan1.0ChiLan1.0
MAGT1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.1X77,122,801 - 77,190,690 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 EnsemblX77,122,801 - 77,190,690 (-)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v0X67,009,590 - 67,078,691 (-)NCBIMhudiblu_PPA_v0panPan3
MAGT1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1X60,122,021 - 60,186,457 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 EnsemblX60,128,571 - 60,186,507 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_TashaX51,135,133 - 51,199,577 (-)NCBI
ROS_Cfam_1.0X61,360,509 - 61,425,186 (-)NCBI
UMICH_Zoey_3.1X59,066,835 - 59,130,908 (-)NCBI
UNSW_CanFamBas_1.0X60,676,273 - 60,741,764 (-)NCBI
UU_Cfam_GSD_1.0X60,264,710 - 60,329,424 (-)NCBI
MAGT1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 EnsemblX61,894,237 - 61,958,517 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1X61,894,237 - 61,958,511 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2X70,812,442 - 70,877,270 (-)NCBISscrofa10.2Sscrofa10.2susScr3
MAGT1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1X66,798,408 - 66,829,249 (-)NCBI
ChlSab1.1 EnsemblX66,797,359 - 66,829,263 (-)Ensembl
Vero_WHO_p1.0NW_02366606714,678,349 - 14,732,000 (+)NCBI
Magt1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046248363,076,940 - 3,144,004 (+)NCBI


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts XM_021734673 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide JAESOR010000614 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: XM_021734673   ⟹   XP_021590348
RefSeq Status:
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2X42,172,097 - 42,212,171 (+)NCBI
SpeTri2.0NW_0049366832,737,545 - 2,775,679 (-)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_021590348 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein KAG3272254 (Get FASTA)   NCBI Sequence Viewer  
Reference Sequences
RefSeq Acc Id: XP_021590348   ⟸   XM_021734673
- Sequence:


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSSTOG00000010870 ENTREZGENE
Ensembl Protein ENSSTOP00000009751 ENTREZGENE
NCBI Gene Magt1 ENTREZGENE