Dok4 (docking protein 4) - Rat Genome Database

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Gene: Dok4 (docking protein 4) Ictidomys tridecemlineatus
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Symbol: Dok4
Name: docking protein 4
RGD ID: 12506298
Description: INVOLVED IN cell surface receptor protein tyrosine kinase signaling pathway (ortholog); nervous system development (ortholog); positive regulation of MAPK cascade (ortholog); ASSOCIATED WITH Bardet-Biedl syndrome (ortholog); developmental and epileptic encephalopathy (ortholog); early infantile epileptic encephalopathy (ortholog); FOUND IN cytoplasm (inferred)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: docking protein 4, transcript variant X1; docking protein 4, transcript variant X2
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: SpeTri2.0 - Squirrel SpeTri2.0 Assembly
Position:
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440934950,052,787 - 50,060,739 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049364759,528,347 - 9,535,683 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049364759,528,342 - 9,535,683 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component
cytoplasm  (IEA)

Molecular Function

References
Additional References at PubMed
PMID:30032202  


Genomics

Comparative Map Data
Dok4
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440934950,052,787 - 50,060,739 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049364759,528,347 - 9,535,683 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049364759,528,342 - 9,535,683 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
DOK4
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381657,471,922 - 57,487,322 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1657,471,922 - 57,487,327 (-)EnsemblGRCh38hg38GRCh38
GRCh371657,505,834 - 57,521,234 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361656,063,374 - 56,077,828 (-)NCBINCBI36Build 36hg18NCBI36
Build 341656,063,374 - 56,077,828NCBI
Celera1642,006,722 - 42,021,228 (-)NCBICelera
Cytogenetic Map16q21NCBI
HuRef1643,373,518 - 43,387,961 (-)NCBIHuRef
CHM1_11658,913,924 - 58,928,449 (-)NCBICHM1_1
T2T-CHM13v2.01663,267,111 - 63,282,532 (-)NCBIT2T-CHM13v2.0
Dok4
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39895,590,456 - 95,602,940 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl895,590,456 - 95,602,958 (-)EnsemblGRCm39 Ensembl
GRCm38894,863,828 - 94,876,312 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl894,863,828 - 94,876,330 (-)EnsemblGRCm38mm10GRCm38
MGSCv37897,387,728 - 97,400,212 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36897,752,989 - 97,765,403 (-)NCBIMGSCv36mm8
Celera899,188,439 - 99,200,990 (-)NCBICelera
Cytogenetic Map8C5NCBI
cM Map846.93NCBI
Dok4
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81910,152,511 - 10,163,182 (+)NCBIGRCr8
mRatBN7.21910,146,520 - 10,157,187 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1910,146,474 - 10,158,203 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1910,110,615 - 10,121,334 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01910,877,459 - 10,888,178 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01910,164,407 - 10,175,126 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01910,563,423 - 10,574,094 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1910,563,423 - 10,574,093 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01910,558,204 - 10,569,911 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41910,585,647 - 10,596,322 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11910,590,459 - 10,602,164 (+)NCBI
Celera1910,033,165 - 10,043,796 (+)NCBICelera
Cytogenetic Map19p13NCBI
Dok4
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495543315,104,394 - 15,116,271 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495543315,104,387 - 15,116,118 (-)NCBIChiLan1.0ChiLan1.0
DOK4
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21866,942,224 - 66,956,686 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11672,864,263 - 72,877,529 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01637,748,004 - 37,762,435 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11656,880,899 - 56,888,765 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1656,880,935 - 56,888,765 (-)Ensemblpanpan1.1panPan2
DOK4
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1258,945,667 - 58,953,206 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl258,946,397 - 58,953,498 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha255,575,237 - 55,583,108 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0259,484,086 - 59,491,944 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl259,484,670 - 59,491,939 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1256,315,471 - 56,323,355 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0257,323,165 - 57,331,026 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0258,216,632 - 58,224,522 (+)NCBIUU_Cfam_GSD_1.0
DOK4
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl619,401,075 - 19,413,654 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1619,400,945 - 19,427,038 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2617,391,781 - 17,417,351 (-)NCBISscrofa10.2Sscrofa10.2susScr3
DOK4
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1543,403,893 - 43,418,062 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl543,401,576 - 43,412,287 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366604732,801,020 - 32,815,160 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Dok4
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462474628,593,901 - 28,604,276 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462474628,590,997 - 28,603,872 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression


Sequence


RefSeq Acc Id: ENSSTOT00000020799   ⟹   ENSSTOP00000021877
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
SpeTri2.0 EnsemblNW_0049364759,528,347 - 9,535,683 (-)Ensembl
RefSeq Acc Id: XM_005318227   ⟹   XP_005318284
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440934950,053,379 - 50,060,739 (+)NCBI
SpeTri2.0NW_0049364759,528,342 - 9,535,683 (-)NCBI
Sequence:
RefSeq Acc Id: XM_040279100   ⟹   XP_040135034
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440934950,052,787 - 50,060,734 (+)NCBI
Protein Sequences
Protein RefSeqs XP_005318284 (Get FASTA)   NCBI Sequence Viewer  
  XP_040135034 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSSTOP00000021877.1
GenBank Protein KAG3257203 (Get FASTA)   NCBI Sequence Viewer  
  KAG3257204 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: XP_005318284   ⟸   XM_005318227
- Peptide Label: isoform X2
- UniProtKB: I3NBY0 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_040135034   ⟸   XM_040279100
- Peptide Label: isoform X1
RefSeq Acc Id: ENSSTOP00000021877   ⟸   ENSSTOT00000020799
Protein Domains
IRS-type PTB


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSSTOG00000023553 Ensembl, UniProtKB/TrEMBL
Ensembl Transcript ENSSTOT00000020799.2 UniProtKB/TrEMBL
Gene3D-CATH 2.30.29.30 UniProtKB/TrEMBL
InterPro DOK4/5/6_PH UniProtKB/TrEMBL
  IRS_PTB UniProtKB/TrEMBL
  PH-like_dom_sf UniProtKB/TrEMBL
  PH_domain UniProtKB/TrEMBL
NCBI Gene Dok4 ENTREZGENE
PANTHER DOCKING PROTEIN 4 UniProtKB/TrEMBL
  DOCKING PROTEIN RELATED UniProtKB/TrEMBL
Pfam IRS UniProtKB/TrEMBL
  PF00169 UniProtKB/TrEMBL
PROSITE IRS_PTB UniProtKB/TrEMBL
SMART IRS UniProtKB/TrEMBL
  PTBI UniProtKB/TrEMBL
  SM00233 UniProtKB/TrEMBL
Superfamily-SCOP PH domain-like UniProtKB/TrEMBL
UniProt I3NBY0 ENTREZGENE, UniProtKB/TrEMBL