LOC101956598 (10 kDa heat shock protein, mitochondrial-like) - Rat Genome Database

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Gene: LOC101956598 (10 kDa heat shock protein, mitochondrial-like) Ictidomys tridecemlineatus
Analyze
Symbol: LOC101956598
Name: 10 kDa heat shock protein, mitochondrial-like
RGD ID: 12501698
Description: ENCODES a protein that exhibits ATP binding (inferred); metal ion binding (inferred); protein folding chaperone (inferred); INVOLVED IN chaperone cofactor-dependent protein refolding (inferred); protein folding (inferred); FOUND IN mitochondrial matrix (inferred)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: 10 kDa heat shock protein, mitochondrial pseudogene; HSPE1
Latest Assembly: SpeTri2.0 - Squirrel SpeTri2.0 Assembly
Position:
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024404946620,210 - 620,565 (+)NCBIHiC_Itri_2
SpeTri2.0NW_0049366713,000,836 - 3,001,343 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics


Expression


Sequence


Reference Sequences
RefSeq Acc Id: XM_040283656   ⟹   XP_040139590
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_024404946620,210 - 620,565 (+)NCBI
Protein Sequences
Protein RefSeqs XP_040139590 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSSTOP00000025347.1
  ENSSTOP00000030262.1
GenBank Protein KAG3288513 (Get FASTA)   NCBI Sequence Viewer  
  KAG3288514 (Get FASTA)   NCBI Sequence Viewer  
Reference Protein Sequences
RefSeq Acc Id: XP_040139590   ⟸   XM_040283656
- UniProtKB: A0A287D9M3 (UniProtKB/TrEMBL),   A0A287CVL1 (UniProtKB/TrEMBL)


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSSTOG00000031333 UniProtKB/TrEMBL
  ENSSTOG00000034579 UniProtKB/TrEMBL
Ensembl Transcript ENSSTOT00000031070.1 UniProtKB/TrEMBL
  ENSSTOT00000035812.1 UniProtKB/TrEMBL
Gene3D-CATH 2.30.33.40 UniProtKB/TrEMBL
InterPro Chaperonin_GroES UniProtKB/TrEMBL
  Chaperonin_GroES_sf UniProtKB/TrEMBL
  Chaprnonin_Cpn10_CS UniProtKB/TrEMBL
  GroES-like_sf UniProtKB/TrEMBL
NCBI Gene LOC101956598 ENTREZGENE
PANTHER 10 KDA HEAT SHOCK PROTEIN, MITOCHONDRIAL UniProtKB/TrEMBL
  PTHR10772 UniProtKB/TrEMBL
Pfam Cpn10 UniProtKB/TrEMBL
PRINTS CHAPERONIN10 UniProtKB/TrEMBL
PROSITE CHAPERONINS_CPN10 UniProtKB/TrEMBL
SMART Cpn10 UniProtKB/TrEMBL
Superfamily-SCOP SSF50129 UniProtKB/TrEMBL
UniProt A0A287CVL1 ENTREZGENE, UniProtKB/TrEMBL
  A0A287D9M3 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2021-03-26 LOC101956598  10 kDa heat shock protein, mitochondrial-like  LOC101956598  10 kDa heat shock protein, mitochondrial pseudogene  Symbol and/or name change 5135510 APPROVED