Arr3 (arrestin 3) - Rat Genome Database

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Gene: Arr3 (arrestin 3) Ictidomys tridecemlineatus
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Symbol: Arr3
Name: arrestin 3
RGD ID: 12494827
Description: ENCODES a protein that exhibits protein domain specific binding (ortholog); INVOLVED IN endocytosis (ortholog); regulation of protein phosphorylation (ortholog); PARTICIPATES IN eicosanoid signaling pathway; visual phototransduction pathway; ASSOCIATED WITH autistic disorder (ortholog); epilepsy (ortholog); genetic disease (ortholog); FOUND IN cell projection (inferred); photoreceptor inner segment (inferred); photoreceptor outer segment (inferred)
Type: protein-coding
RefSeq Status: PROVISIONAL
Previously known as: arrestin 3, retinal (X-arrestin); arrestin 3, transcript variant X1; arrestin 3, transcript variant X2; Arrestin-C; cArr; Cone arrestin; Retinal cone arrestin-3
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: SpeTri2.0 - Squirrel SpeTri2.0 Assembly
Position:
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2X47,432,077 - 47,445,740 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049367621,194,166 - 1,208,844 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049367621,194,251 - 1,207,914 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

Molecular Pathway Annotations     Click to see Annotation Detail View
References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
Arr3
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2X47,432,077 - 47,445,740 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049367621,194,166 - 1,208,844 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049367621,194,251 - 1,207,914 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ARR3
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38X70,268,334 - 70,281,883 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 EnsemblX70,268,305 - 70,281,840 (+)EnsemblGRCh38hg38GRCh38
GRCh37X69,488,184 - 69,501,690 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36X69,404,910 - 69,418,415 (+)NCBINCBI36Build 36hg18NCBI36
Build 34X69,271,222 - 69,284,711NCBI
CeleraX69,841,522 - 69,855,024 (+)NCBICelera
Cytogenetic MapXq13.1NCBI
HuRefX63,309,253 - 63,322,604 (+)NCBIHuRef
CHM1_1X69,382,163 - 69,395,648 (+)NCBICHM1_1
T2T-CHM13v2.0X68,701,653 - 68,715,201 (+)NCBIT2T-CHM13v2.0
Arr3
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39X99,649,086 - 99,662,099 (+)NCBIGRCm39GRCm39mm39
GRCm39 EnsemblX99,649,103 - 99,662,099 (+)EnsemblGRCm39 Ensembl
GRCm38X100,605,480 - 100,618,493 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 EnsemblX100,605,497 - 100,618,493 (+)EnsemblGRCm38mm10GRCm38
MGSCv37X97,800,836 - 97,813,832 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36X96,808,275 - 96,821,212 (+)NCBIMGSCv36mm8
CeleraX87,531,523 - 87,544,518 (+)NCBICelera
Cytogenetic MapXC3NCBI
cM MapX43.72NCBI
Arr3
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8X69,739,959 - 69,752,300 (+)NCBIGRCr8
mRatBN7.2X65,699,881 - 65,712,224 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 EnsemblX65,698,699 - 65,712,153 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_UtxX67,183,297 - 67,195,639 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0X70,683,687 - 70,696,028 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0X68,244,588 - 68,256,931 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0X70,438,590 - 70,452,140 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 EnsemblX70,438,617 - 70,452,067 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0X71,310,209 - 71,323,756 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4X88,602,380 - 88,614,721 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1X88,684,283 - 88,688,153 (+)NCBI
CeleraX66,058,741 - 66,071,082 (+)NCBICelera
Cytogenetic MapXq22NCBI
Arr3
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554759,819,792 - 9,835,200 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554759,819,783 - 9,835,526 (+)NCBIChiLan1.0ChiLan1.0
ARR3
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2X69,945,634 - 69,959,110 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1X69,949,236 - 69,962,712 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0X59,536,796 - 59,550,274 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1X69,596,163 - 69,609,624 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 EnsemblX69,596,163 - 69,609,624 (+)Ensemblpanpan1.1panPan2
ARR3
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1X54,725,034 - 54,730,920 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 EnsemblX54,718,323 - 54,730,852 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_TashaX45,544,260 - 45,556,911 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0X55,684,406 - 55,697,072 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 EnsemblX55,684,472 - 55,697,004 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1X53,653,383 - 53,666,039 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0X54,984,189 - 54,997,103 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0X54,911,364 - 54,924,024 (+)NCBIUU_Cfam_GSD_1.0
ARR3
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 EnsemblX56,296,596 - 56,310,506 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1X56,295,107 - 56,310,507 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2X63,491,381 - 63,505,290 (+)NCBISscrofa10.2Sscrofa10.2susScr3
ARR3
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1X60,111,875 - 60,127,144 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 EnsemblX60,114,643 - 60,127,255 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_0236660651,958,268 - 1,971,777 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Arr3
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_004624903246,888 - 255,169 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression


Sequence


RefSeq Acc Id: ENSSTOT00000011466   ⟹   ENSSTOP00000010290
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
SpeTri2.0 EnsemblNW_0049367621,194,166 - 1,208,844 (-)Ensembl
RefSeq Acc Id: NM_001282266   ⟹   NP_001269195
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2X47,432,077 - 47,445,740 (-)NCBI
SpeTri2.0NW_0049367621,194,251 - 1,207,914 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021719900   ⟹   XP_021575575
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2X47,432,077 - 47,444,443 (-)NCBI
SpeTri2.0NW_0049367621,194,251 - 1,206,617 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021719901   ⟹   XP_021575576
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2X47,432,077 - 47,444,755 (-)NCBI
SpeTri2.0NW_0049367621,194,251 - 1,206,946 (-)NCBI
Sequence:
RefSeq Acc Id: NP_001269195   ⟸   NM_001282266
- UniProtKB: Q5DRQ4 (UniProtKB/Swiss-Prot),   I3MHE0 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_021575576   ⟸   XM_021719901
- Peptide Label: isoform X2
- UniProtKB: I3MHE0 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_021575575   ⟸   XM_021719900
- Peptide Label: isoform X1
- UniProtKB: I3MHE0 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSSTOP00000010290   ⟸   ENSSTOT00000011466
Protein Domains
Arrestin C-terminal-like


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSSTOG00000011462 Ensembl, UniProtKB/TrEMBL
Ensembl Transcript ENSSTOT00000011466.3 UniProtKB/TrEMBL
Gene3D-CATH 2.60.40.640 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  2.60.40.840 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro Arrestin UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Arrestin-like_C UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Arrestin-like_N UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Arrestin_C-like UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Arrestin_CS UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Arrestin_N UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Ig_E-set UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
NCBI Gene Arr3 ENTREZGENE
PANTHER PTHR11792 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PTHR11792:SF19 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam Arrestin_C UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Arrestin_N UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PRINTS ARRESTIN UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PROSITE ARRESTINS UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
SMART Arrestin_C UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF81296 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt ARRC_ICTTR UniProtKB/Swiss-Prot
  I3MHE0 ENTREZGENE, UniProtKB/TrEMBL
  Q5DRQ4 ENTREZGENE