Lyplal1 (lysophospholipase like 1)

Gene: Lyplal1 (lysophospholipase like 1) Ictidomys tridecemlineatus

Analyze

Symbol:

Lyplal1

Name:

lysophospholipase like 1

RGD ID:

12486729

Description:

ENCODES a protein that exhibits lipase activity (ortholog); INVOLVED IN negative regulation of Golgi to plasma membrane protein transport (ortholog); ASSOCIATED WITH gastrointestinal stromal tumor (ortholog); genetic disease (ortholog); Loeys-Dietz syndrome 4 (ortholog); FOUND IN cytoplasm (inferred); cytosol (inferred)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

lysophospholipase like 1, transcript variant X1; lysophospholipase like 1, transcript variant X2; lysophospholipase like 1, transcript variant X3; lysophospholipase-like protein 1

RGD Orthologs

Alliance Genes

More Info

more info ...

Latest Assembly:

SpeTri2.0 - Squirrel SpeTri2.0 Assembly

Position:

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024409344	57,685,177 - 57,712,354 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936650	2,933,306 - 2,960,846 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936650	2,933,661 - 2,960,558 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

gastrointestinal stromal tumor (ISO)

genetic disease (ISO)

Loeys-Dietz syndrome 4 (ISO)

Martsolf Syndrome (ISO)

parathyroid carcinoma (ISO)

Usher syndrome (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

macromolecule depalmitoylation (IEA)

negative regulation of cGAS/STING signaling pathway (IEA)

negative regulation of Golgi to plasma membrane protein transport (ISO)

Cellular Component

cytoplasm (IEA)

cytosol (IEA)

Molecular Function

carboxylic ester hydrolase activity (IEA)

hydrolase activity (IEA)

hydrolase activity, acting on ester bonds (IEA)

lipase activity (ISO)

palmitoyl-(protein) hydrolase activity (IEA)

protein binding (ISO)

References

Additional References at PubMed

PMID:30032202

Genomics

Comparative Map Data

Lyplal1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024409344	57,685,177 - 57,712,354 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936650	2,933,306 - 2,960,846 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936650	2,933,661 - 2,960,558 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

LYPLAL1
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	1	219,173,878 - 219,445,496 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	1	219,173,869 - 219,212,865 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	1	219,347,220 - 219,386,200 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	1	217,413,844 - 217,451,783 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	1	215,735,617 - 215,773,553	NCBI
Celera	1	192,564,906 - 192,603,940 (+)	NCBI		Celera
Cytogenetic Map	1	q41	NCBI
HuRef	1	190,016,930 - 190,055,957 (+)	NCBI		HuRef
CHM1_1	1	220,620,005 - 220,659,032 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	1	218,409,848 - 218,681,408 (+)	NCBI		T2T-CHM13v2.0

Lyplal1
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	1	185,819,929 - 185,849,507 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	1	185,819,928 - 185,849,507 (-)	Ensembl		GRCm39 Ensembl
GRCm38	1	186,087,732 - 186,117,310 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	1	186,087,731 - 186,117,310 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	1	187,911,611 - 187,941,189 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	1	187,788,668 - 187,818,098 (-)	NCBI		MGSCv36	mm8
Celera	1	193,030,160 - 193,053,254 (-)	NCBI		Celera
Cytogenetic Map	1	H5	NCBI
cM Map	1	89.81	NCBI

Lyplal1
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	13	100,158,060 - 100,189,339 (-)	NCBI		GRCr8
mRatBN7.2	13	97,626,568 - 97,657,901 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	13	97,626,451 - 97,657,867 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	13	100,135,908 - 100,167,350 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	13	101,531,636 - 101,562,909 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	13	98,718,214 - 98,749,656 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	13	104,049,263 - 104,080,680 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	13	104,049,386 - 104,080,631 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	13	108,706,787 - 108,738,098 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	13	102,143,174 - 102,171,752 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	13	102,332,339 - 102,360,879 (-)	NCBI
Celera	13	97,136,739 - 97,168,192 (-)	NCBI		Celera
Cytogenetic Map	13	q26	NCBI

Lyplal1
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955520	4,251,957 - 4,281,838 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955520	4,251,863 - 4,281,775 (-)	NCBI	ChiLan1.0	ChiLan1.0

LYPLAL1
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	1	29,928,773 - 30,231,267 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	1	30,025,414 - 30,193,861 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	1	194,737,158 - 194,775,853 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	1	199,586,920 - 199,625,423 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	1	199,586,920 - 199,625,423 (+)	Ensembl	panpan1.1		panPan2

LYPLAL1
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	38	14,100,818 - 14,137,292 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	38	14,100,698 - 14,268,481 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	38	14,143,532 - 14,180,609 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	38	14,136,744 - 14,173,896 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	38	14,136,661 - 14,173,286 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	38	14,146,280 - 14,183,361 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	38	14,489,895 - 14,526,974 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	38	14,802,107 - 14,838,748 (+)	NCBI		UU_Cfam_GSD_1.0

LYPLAL1
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	10	8,946,487 - 9,062,412 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	10	8,946,463 - 9,061,033 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	10	11,029,585 - 11,088,269 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

LYPLAL1
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	25	10,370,715 - 10,408,807 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	25	10,370,814 - 10,408,767 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666055	10,766,878 - 10,806,116 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Lyplal1
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624835	3,022,311 - 3,052,724 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624835	3,023,151 - 3,052,826 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Expression

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_005335867	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_021733661	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_021733662	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_040277572	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_040277573	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_040277574	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_040277575	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	JAESOR010004404	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSSTOT00000021171 ⟹ ENSSTOP00000022577

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
SpeTri2.0 Ensembl	NW_004936650	2,933,306 - 2,960,846 (-)	Ensembl

RefSeq Acc Id:

XM_005335867 ⟹ XP_005335924

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024409344	57,685,177 - 57,712,354 (-)	NCBI
SpeTri2.0	NW_004936650	2,933,661 - 2,960,558 (-)	NCBI

Sequence:

show sequence

GCGTCCCCGCTGTGGCGGAAGGGCGGGGTTGGACGACCTGTTCGGGCTTCCGTGATGGCTGCTG
CGTCGAGTTCGGCTCGCTTGCGGCGTTGTGTGGTATCGCCGGCTGGGAGGCACAGCGCCTCACT
GATCTTCCTGCACGGCTCAGGTGATTCTGGACAAGGACTCAGGATGTGGATCAAGCAGGTTTTA
AATCAAGATTTAGCATTCCAACATGTAAAAATTATTTATCCAACAGCTCCTTCCAGGCCATATA
CTCCTTTGAAGGGAGGAATCTCCAATGTGTGGTTTGACAGATTTAAAATATCAAATGACTGCCC
AGAACACCTTGAATCAATTGATGCAATGTGTCAGGTACTTACTGGCTTGATTGATGAAGAAGTA
AAAAGTGGCATCAGGAAGAACAGAATATTAGTAGGAGGATTTTCTATGGGAGGATGCATGGCAA
TGCATTTAGCATATAGAAATCATCAAGATTTGGCAGGAGTATTTGTTCTGTCTAGTTTTTTGAA
TAAAGCCTCTGCTGTTTACCAGACTCTTCAGAAAAGTGATGGTGTACTTCCTGAATTATTTCAG
TGTCATGGTACTGCAGATGAATTAGTTTTTCATTCTTGGGGTGAAGAGACAAATTCAATGTTAA
AATTTCTAGGAGTGAACACAAAGTTTTATAGTTTTCCAAATCTTTTCCATGAGCTAAGCAAATC
TGAGTTAGAAAAACTGAAATCATGGATTCTTACCAAGCTACCTAGAGAAGTGGAAGGCCAAAAT
GAATGAATCAAAATTTACTTGTTAATACAAATATATAATGTTTTTGAGAAAAATGATTTTTTTA
ATTTTTATTTTTTTAATTTTCTAATTAGTTATACATGATAGTAGAATGCATTTTGACACATTGT
ACACAAATGGAGCACAACTTCCCATTCCTCTAGCTGTACACAGTATGTTACCTAAGTATATGTA
TGAAGGCATGCACGAATGGTGTGACTTTGCTTTGTGTAGAACCAGAGACATGAAAAATTGTGCT
CTATATGTG

hide sequence

RefSeq Acc Id:

XM_021733661 ⟹ XP_021589336

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024409344	57,685,177 - 57,710,990 (-)	NCBI
SpeTri2.0	NW_004936650	2,933,661 - 2,960,068 (-)	NCBI

Sequence:

show sequence

TGCTAGAGTCACATCCATTATTTCATACTTTTCAGGGTCAGCTACTAGTGATTTTGCCTTGTTC
CACCGGGATGGATTATTTGCCTTTGCTTTCTTTCTTCAGTCTTCCATAGGAATGTAGACAAGTG
AGACTCACAGTTAACTCAGATGGTATTTACAGAGTAATTCCTTTTTATATGGCACTGCAGAAAT
GGAATGCTTTTCCCCTTTTCCTTTTTCCTACTCTCCATTCTCCCTTTCCCCTTTCTTCCTCTGT
CTTTAAGCCTCCAAGATAAAGTACAAAGTTAATTCTGAGGCCCAAGGGTAGGTATTTTCTTCCC
CTGCCTGCCCTTCATTCTGTATAGCATTTCTTATGCTCCTCTGTAATCTTTTATGTCTTTCTTC
TCCAATGGATTGTGAGCACCTCCAAAGTAAGGACCCTTGTTTTAATTATTGCATTCACAGTGCT
TGGCTTTCTTTTAAGAAATGAGATGCAGCCAGCATCCTCAGGGGGCCTACCTAAATTTAAAAAC
AAAAACAGTTCATTAGTTTGAGTCAGTATGCATGGGAGATCACAAGATGGTGCATGATTTACTG
CCAAGAGACTAGAAAGGAAGAAAAAAAAATGTGGTTAAGCATTATTAAGCCATTTGGAGGATGA
AGAGCTTGTCCGATATTATTTTTCTAGTAAGTAGTCTTTGAATTGAGATGTGTAGTCTTAAGGG
GGATGATGATTGGAAAGATACAACATGGAGAACTAGCTGTGAGCAGTAATGAGAGATATTCTCT
TCATTTTGAAAATGAGGCCAGATGGATTCCACTGTTGTCCATAAGTCACTTGGCTATTAGGTGA
ATAGTGGTGAAATTGGAATTTGAGCCCAAATCTTTTACTCCAAACTTAGTATTCTGGTGATTCT
GGACAAGGACTCAGGATGTGGATCAAGCAGGTTTTAAATCAAGATTTAGCATTCCAACATGTAA
AAATTATTTATCCAACAGCTCCTTCCAGGCCATATACTCCTTTGAAGGGAGGAATCTCCAATGT
GTGGTTTGACAGATTTAAAATATCAAATGACTGCCCAGAACACCTTGAATCAATTGATGCAATG
TGTCAGGTACTTACTGGCTTGATTGATGAAGAAGTAAAAAGTGGCATCAGGAAGAACAGAATAT
TAGTAGGAGGATTTTCTATGGGAGGATGCATGGCAATGCATTTAGCATATAGAAATCATCAAGA
TTTGGCAGGAGTATTTGTTCTGTCTAGTTTTTTGAATAAAGCCTCTGCTGTTTACCAGACTCTT
CAGAAAAGTGATGGTGTACTTCCTGAATTATTTCAGTGTCATGGTACTGCAGATGAATTAGTTT
TTCATTCTTGGGGTGAAGAGACAAATTCAATGTTAAAATTTCTAGGAGTGAACACAAAGTTTTA
TAGTTTTCCAAATCTTTTCCATGAGCTAAGCAAATCTGAGTTAGAAAAACTGAAATCATGGATT
CTTACCAAGCTACCTAGAGAAGTGGAAGGCCAAAATGAATGAATCAAAATTTACTTGTTAATAC
AAATATATAATGTTTTTGAGAAAAATGATTTTTTTAATTTTTATTTTTTTAATTTTCTAATTAG
TTATACATGATAGTAGAATGCATTTTGACACATTGTACACAAATGGAGCACAACTTCCCATTCC
TCTAGCTGTACACAGTATGTTACCTAAGTATATGTATGAAGGCATGCACGAATGGTGTGACTTT
GCTTTGTGTAGAACCAGAGACATGAAAAATTGTGCTCTATATGTG

hide sequence

RefSeq Acc Id:

XM_021733662 ⟹ XP_021589337

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024409344	57,685,177 - 57,712,006 (-)	NCBI
SpeTri2.0	NW_004936650	2,933,661 - 2,960,396 (-)	NCBI

Sequence:

show sequence

TATGTCCCGTTTATCTGCAATTTGGAAACATCTTCCCTTTGATTCCCTCAGTGTTTCCCAGTGG
AGGAGGCGCTGGGTCGCAAAGGAGCCGTGTGGGTTCGGAAAAGGTGGTTCTTCCCTTGCTGGCC
CGTGACTGTGGACGCATGGTCACTGTCACCTCTTGGTCTTACTGTTTTGTCTTGCGCGCTGGCC
CACGATCTTCTCTTCTGAGCCTTGTGCCCTGCAGTCCACTGTGCAGTCCTCCCGTCCACAACAT
TCTCTCAAGCTCAACCCTTGACCACCTCCCGTTCCTCTCCGCACATTTAAACAGCAGGTGATTC
TGGACAAGGACTCAGGATGTGGATCAAGCAGGTTTTAAATCAAGATTTAGCATTCCAACATGTA
AAAATTATTTATCCAACAGCTCCTTCCAGGCCATATACTCCTTTGAAGGGAGGAATCTCCAATG
TGTGGTTTGACAGATTTAAAATATCAAATGACTGCCCAGAACACCTTGAATCAATTGATGCAAT
GTGTCAGGTACTTACTGGCTTGATTGATGAAGAAGTAAAAAGTGGCATCAGGAAGAACAGAATA
TTAGTAGGAGGATTTTCTATGGGAGGATGCATGGCAATGCATTTAGCATATAGAAATCATCAAG
ATTTGGCAGGAGTATTTGTTCTGTCTAGTTTTTTGAATAAAGCCTCTGCTGTTTACCAGACTCT
TCAGAAAAGTGATGGTGTACTTCCTGAATTATTTCAGTGTCATGGTACTGCAGATGAATTAGTT
TTTCATTCTTGGGGTGAAGAGACAAATTCAATGTTAAAATTTCTAGGAGTGAACACAAAGTTTT
ATAGTTTTCCAAATCTTTTCCATGAGCTAAGCAAATCTGAGTTAGAAAAACTGAAATCATGGAT
TCTTACCAAGCTACCTAGAGAAGTGGAAGGCCAAAATGAATGAATCAAAATTTACTTGTTAATA
CAAATATATAATGTTTTTGAGAAAAATGATTTTTTTAATTTTTATTTTTTTAATTTTCTAATTA
GTTATACATGATAGTAGAATGCATTTTGACACATTGTACACAAATGGAGCACAACTTCCCATTC
CTCTAGCTGTACACAGTATGTTACCTAAGTATATGTATGAAGGCATGCACGAATGGTGTGACTT
TGCTTTGTGTAGAACCAGAGACATGAAAAATTGTGCTCTATATGTG

hide sequence

RefSeq Acc Id:

XM_040277572 ⟹ XP_040133506

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024409344	57,685,177 - 57,712,072 (-)	NCBI

RefSeq Acc Id:

XM_040277573 ⟹ XP_040133507

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024409344	57,685,177 - 57,712,172 (-)	NCBI

RefSeq Acc Id:

XM_040277574 ⟹ XP_040133508

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024409344	57,685,177 - 57,712,073 (-)	NCBI

RefSeq Acc Id:

XM_040277575 ⟹ XP_040133509

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024409344	57,685,177 - 57,711,320 (-)	NCBI

Protein Sequences


Protein RefSeqs	XP_005335924	(Get FASTA)	NCBI Sequence Viewer
	XP_021589336	(Get FASTA)	NCBI Sequence Viewer
	XP_021589337	(Get FASTA)	NCBI Sequence Viewer
	XP_040133506	(Get FASTA)	NCBI Sequence Viewer
	XP_040133507	(Get FASTA)	NCBI Sequence Viewer
	XP_040133508	(Get FASTA)	NCBI Sequence Viewer
	XP_040133509	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSSTOP00000022577.1
GenBank Protein	KAG3258071	(Get FASTA)	NCBI Sequence Viewer
	KAG3258072	(Get FASTA)	NCBI Sequence Viewer
	KAG3258073	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:	XP_005335924 ⟸ XM_005335867
- Peptide Label:	isoform X3
- UniProtKB:	I3NDY0 (UniProtKB/TrEMBL)
- Sequence:	show sequence MAAASSSARLRRCVVSPAGRHSASLIFLHGSGDSGQGLRMWIKQVLNQDLAFQHVKIIYPTAPS RPYTPLKGGISNVWFDRFKISNDCPEHLESIDAMCQVLTGLIDEEVKSGIRKNRILVGGFSMGG CMAMHLAYRNHQDLAGVFVLSSFLNKASAVYQTLQKSDGVLPELFQCHGTADELVFHSWGEETN SMLKFLGVNTKFYSFPNLFHELSKSELEKLKSWILTKLPREVEGQNE hide sequence

RefSeq Acc Id:

XP_021589337 ⟸ XM_021733662

- Peptide Label:

isoform X2

- Sequence:

show sequence

MWIKQVLNQDLAFQHVKIIYPTAPSRPYTPLKGGISNVWFDRFKISNDCPEHLESIDAMCQVLT
GLIDEEVKSGIRKNRILVGGFSMGGCMAMHLAYRNHQDLAGVFVLSSFLNKASAVYQTLQKSDG
VLPELFQCHGTADELVFHSWGEETNSMLKFLGVNTKFYSFPNLFHELSKSELEKLKSWILTKLP
REVEGQNE

hide sequence

RefSeq Acc Id:

XP_021589336 ⟸ XM_021733661

- Peptide Label:

isoform X2

- Sequence:

show sequence

MWIKQVLNQDLAFQHVKIIYPTAPSRPYTPLKGGISNVWFDRFKISNDCPEHLESIDAMCQVLT
GLIDEEVKSGIRKNRILVGGFSMGGCMAMHLAYRNHQDLAGVFVLSSFLNKASAVYQTLQKSDG
VLPELFQCHGTADELVFHSWGEETNSMLKFLGVNTKFYSFPNLFHELSKSELEKLKSWILTKLP
REVEGQNE

hide sequence

RefSeq Acc Id:	XP_040133507 ⟸ XM_040277573
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_040133508 ⟸ XM_040277574
- Peptide Label:	isoform X4

RefSeq Acc Id:	XP_040133506 ⟸ XM_040277572
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_040133509 ⟸ XM_040277575
- Peptide Label:	isoform X2

RefSeq Acc Id:

ENSSTOP00000022577 ⟸ ENSSTOT00000021171

Protein Domains

Phospholipase/carboxylesterase/thioesterase

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSSTOG00000025167	Ensembl, UniProtKB/TrEMBL
Ensembl Transcript	ENSSTOT00000021171.2	UniProtKB/TrEMBL
Gene3D-CATH	3.40.50.1820	UniProtKB/TrEMBL
InterPro	AB_hydrolase	UniProtKB/TrEMBL
	PLipase/COase/thioEstase	UniProtKB/TrEMBL
NCBI Gene	Lyplal1	ENTREZGENE
PANTHER	LYSOPHOSPHOLIPASE-LIKE PROTEIN 1	UniProtKB/TrEMBL
	LYSOPHOSPHOLIPASE-RELATED	UniProtKB/TrEMBL
Pfam	Abhydrolase_2	UniProtKB/TrEMBL
Superfamily-SCOP	SSF53474	UniProtKB/TrEMBL
UniProt	I3NDY0	ENTREZGENE, UniProtKB/TrEMBL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Send us a Message

Imported Disease Annotations - ClinVar