Pgm3 (phosphoglucomutase 3) - Rat Genome Database

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Gene: Pgm3 (phosphoglucomutase 3) Ictidomys tridecemlineatus
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Symbol: Pgm3
Name: phosphoglucomutase 3
RGD ID: 12486546
Description: ENCODES a protein that exhibits phosphoacetylglucosamine mutase activity (ortholog); phosphoglucomutase activity (ortholog); INVOLVED IN glucose 1-phosphate metabolic process (ortholog); hemopoiesis (ortholog); protein N-linked glycosylation (ortholog); PARTICIPATES IN amino sugar metabolic pathway; french type sialuria pathway; glycogen biosynthetic pathway; ASSOCIATED WITH cervical cancer (ortholog); hyper IgE syndrome (ortholog); immunodeficiency 23 (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Also known as: phosphoacetylglucosamine mutase
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: SpeTri2.0 - Squirrel SpeTri2.0 Assembly
Position:
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494678,848,275 - 78,884,092 (-)NCBI
SpeTri2.0NW_0049365107,586,817 - 7,622,586 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Molecular Function

References

Genomics

Comparative Map Data
Pgm3
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494678,848,275 - 78,884,092 (-)NCBI
SpeTri2.0NW_0049365107,586,817 - 7,622,586 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
PGM3
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl683,161,150 - 83,193,936 (-)EnsemblGRCh38hg38GRCh38
GRCh38683,150,728 - 83,193,900 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh37683,860,447 - 83,903,619 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36683,935,347 - 83,959,654 (-)NCBINCBI36hg18NCBI36
Celera684,311,934 - 84,336,241 (-)NCBI
Cytogenetic Map6q14.1NCBI
HuRef681,102,841 - 81,131,905 (-)NCBIHuRef
CHM1_1683,972,285 - 84,001,348 (-)NCBICHM1_1
Pgm3
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39986,423,997 - 86,453,927 (-)NCBIGRCm39mm39
GRCm39 Ensembl986,436,430 - 86,453,895 (-)Ensembl
GRCm38986,552,476 - 86,571,878 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl986,554,377 - 86,571,842 (-)EnsemblGRCm38mm10GRCm38
MGSCv37986,446,083 - 86,465,449 (-)NCBIGRCm37mm9NCBIm37
MGSCv36986,349,194 - 86,368,545 (-)NCBImm8
Celera983,629,204 - 83,648,570 (-)NCBICelera
Cytogenetic Map9E3.1NCBI
cM Map946.58NCBI
Pgm3
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.2887,517,931 - 87,536,034 (-)NCBI
Rnor_6.0 Ensembl894,225,515 - 94,243,215 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.0894,225,513 - 94,243,230 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0893,738,656 - 93,756,367 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4891,810,223 - 91,827,293 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1891,828,427 - 91,845,308 (-)NCBI
Celera887,122,461 - 87,139,531 (-)NCBICelera
Cytogenetic Map8q31NCBI
Pgm3
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495541110,904,022 - 10,924,216 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495541110,904,022 - 10,925,613 (-)NCBIChiLan1.0ChiLan1.0
PGM3
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.1684,336,092 - 84,364,515 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl684,336,092 - 84,364,515 (-)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v0681,062,356 - 81,090,215 (-)NCBIMhudiblu_PPA_v0panPan3
PGM3
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11243,582,472 - 43,611,583 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1243,584,940 - 43,611,777 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1243,398,757 - 43,424,981 (-)NCBI
ROS_Cfam_1.01244,352,674 - 44,378,899 (-)NCBI
UMICH_Zoey_3.11243,692,121 - 43,718,325 (-)NCBI
UNSW_CanFamBas_1.01243,640,874 - 43,667,265 (-)NCBI
UU_Cfam_GSD_1.01243,801,971 - 43,828,223 (-)NCBI
PGM3
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl183,003,655 - 83,029,899 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1183,003,622 - 83,029,392 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2193,255,151 - 93,280,921 (+)NCBISscrofa10.2Sscrofa10.2susScr3
PGM3
(Chlorocebus sabaeus - African green monkey)
Vervet AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1137,841,724 - 7,871,013 (-)NCBI
ChlSab1.1 Ensembl137,844,765 - 7,871,002 (-)Ensembl
Pgm3
(Heterocephalus glaber - naked mole-rat)
Molerat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_00462479911,395,465 - 11,423,878 (+)NCBI


Expression


Sequence


Reference Sequences
RefSeq Acc Id: XM_005324756   ⟹   XP_005324813
RefSeq Status:
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440494678,848,277 - 78,884,092 (-)NCBI
SpeTri2.0NW_0049365107,586,817 - 7,622,586 (+)NCBI
Sequence:
RefSeq Acc Id: XM_021726054   ⟹   XP_021581729
RefSeq Status:
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
SpeTri2.0NW_0049365107,587,861 - 7,622,586 (+)NCBI
Sequence:
RefSeq Acc Id: XM_021726055   ⟹   XP_021581730
RefSeq Status:
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440494678,848,277 - 78,883,018 (-)NCBI
SpeTri2.0NW_0049365107,587,901 - 7,622,586 (+)NCBI
Sequence:
RefSeq Acc Id: XM_021726056   ⟹   XP_021581731
RefSeq Status:
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440494678,861,325 - 78,883,942 (-)NCBI
SpeTri2.0NW_0049365107,587,827 - 7,609,571 (+)NCBI
Sequence:
RefSeq Acc Id: XM_021726057   ⟹   XP_021581732
RefSeq Status:
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440494678,848,277 - 78,883,944 (-)NCBI
SpeTri2.0NW_0049365107,587,826 - 7,622,586 (+)NCBI
Sequence:
RefSeq Acc Id: XM_040283005   ⟹   XP_040138939
RefSeq Status:
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440494678,848,277 - 78,883,943 (-)NCBI
RefSeq Acc Id: XM_040283006   ⟹   XP_040138940
RefSeq Status:
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440494678,848,277 - 78,883,004 (-)NCBI
RefSeq Acc Id: XM_040283007   ⟹   XP_040138941
RefSeq Status:
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440494678,861,326 - 78,883,004 (-)NCBI
RefSeq Acc Id: XM_040283008   ⟹   XP_040138942
RefSeq Status:
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440494678,848,275 - 78,883,942 (-)NCBI
RefSeq Acc Id: XM_040283009   ⟹   XP_040138943
RefSeq Status:
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440494678,848,277 - 78,882,016 (-)NCBI
Reference Sequences
RefSeq Acc Id: XP_005324813   ⟸   XM_005324756
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_021581732   ⟸   XM_021726057
- Peptide Label: isoform X4
- Sequence:
RefSeq Acc Id: XP_021581731   ⟸   XM_021726056
- Peptide Label: isoform X2
- Sequence:
RefSeq Acc Id: XP_021581729   ⟸   XM_021726054
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_021581730   ⟸   XM_021726055
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_040138942   ⟸   XM_040283008
- Peptide Label: isoform X3
RefSeq Acc Id: XP_040138939   ⟸   XM_040283005
- Peptide Label: isoform X1
RefSeq Acc Id: XP_040138940   ⟸   XM_040283006
- Peptide Label: isoform X1
RefSeq Acc Id: XP_040138943   ⟸   XM_040283009
- Peptide Label: isoform X5
RefSeq Acc Id: XP_040138941   ⟸   XM_040283007
- Peptide Label: isoform X2
Protein Domains
PGM_PMM_I   PGM_PMM_IV


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSSTOG00000001276 ENTREZGENE, UniProtKB/TrEMBL
Ensembl Protein ENSSTOP00000001148 UniProtKB/TrEMBL
  ENSSTOP00000024332 ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSSTOT00000001280 UniProtKB/TrEMBL
  ENSSTOT00000032209 UniProtKB/TrEMBL
InterPro A-D-PHexomutase_a/b/a-I UniProtKB/TrEMBL
  A-D-PHexomutase_a/b/a-I/II/III UniProtKB/TrEMBL
  A-D-PHexomutase_C UniProtKB/TrEMBL
  A-D-PHexomutase_C_sf UniProtKB/TrEMBL
  A-D-PHexomutase_CS UniProtKB/TrEMBL
  PAGM UniProtKB/TrEMBL
NCBI Gene Pgm3 ENTREZGENE
Pfam PGM_PMM_I UniProtKB/TrEMBL
  PGM_PMM_IV UniProtKB/TrEMBL
PIRSF PAGM UniProtKB/TrEMBL
PROSITE PGM_PMM UniProtKB/TrEMBL
Superfamily-SCOP SSF53738 UniProtKB/TrEMBL
  SSF55957 UniProtKB/TrEMBL
UniProt A0A287CSS9_ICTTR UniProtKB/TrEMBL
  I3LYB1_ICTTR UniProtKB/TrEMBL