Me1 (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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HiC_Itri_2 | NW_024404946 | 78,899,805 - 79,044,563 (-) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936510 | 7,426,347 - 7,571,553 (+) | Ensembl | SpeTri2.0 | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936510 | 7,425,983 - 7,571,090 (+) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
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ME1 (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCh38 | 6 | 83,210,402 - 83,431,051 (-) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 6 | 83,210,402 - 83,431,051 (-) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 6 | 83,920,121 - 84,140,770 (-) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 6 | 83,976,827 - 84,197,498 (-) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Build 34 | 6 | 83,977,975 - 84,197,499 | NCBI | | | | | Celera | 6 | 84,353,414 - 84,574,177 (-) | NCBI | | Celera | | | Cytogenetic Map | 6 | q14.2 | NCBI | | | | | HuRef | 6 | 81,148,328 - 81,370,879 (-) | NCBI | | HuRef | | | CHM1_1 | 6 | 84,017,801 - 84,238,482 (-) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 6 | 84,433,644 - 84,654,257 (-) | NCBI | | T2T-CHM13v2.0 | | |
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Me1 (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCm39 | 9 | 86,463,416 - 86,577,967 (-) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 9 | 86,463,424 - 86,578,006 (-) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 9 | 86,581,363 - 86,695,914 (-) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 9 | 86,581,371 - 86,695,953 (-) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 9 | 86,474,970 - 86,589,947 (-) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 9 | 87,524,432 - 87,639,643 (-) | NCBI | | MGSCv36 | mm8 | | MGSCv36 | 9 | 86,378,094 - 86,492,941 (-) | NCBI | | MGSCv36 | mm8 | | Celera | 9 | 83,658,088 - 83,772,920 (-) | NCBI | | Celera | | | Cytogenetic Map | 9 | E3.1 | NCBI | | | | | cM Map | 9 | 46.58 | NCBI | | | | |
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Me1 (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCr8 | 8 | 96,429,057 - 96,540,244 (-) | NCBI | | GRCr8 | | | mRatBN7.2 | 8 | 87,549,043 - 87,660,251 (-) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 8 | 87,549,043 - 87,660,304 (-) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 8 | 93,229,577 - 93,340,927 (-) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 8 | 91,428,778 - 91,540,131 (-) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 8 | 89,270,059 - 89,381,778 (-) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 8 | 94,256,830 - 94,368,834 (-) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 8 | 94,256,839 - 94,368,834 (-) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 8 | 93,769,078 - 93,863,611 (-) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 8 | 91,839,845 - 91,955,917 (-) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | RGSC_v3.1 | 8 | 91,860,614 - 91,975,372 (-) | NCBI | | | | | Celera | 8 | 87,151,761 - 87,246,579 (-) | NCBI | | Celera | | | RH 3.4 Map | 8 | 999.69 | RGD | | | | | Cytogenetic Map | 8 | q31 | NCBI | | | | |
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Me1 (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChiLan1.0 Ensembl | NW_004955411 | 10,938,944 - 11,065,085 (-) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955411 | 10,938,580 - 11,084,171 (-) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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ME1 (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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NHGRI_mPanPan1-v2 | 5 | 103,312,102 - 103,524,703 (-) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 6 | 101,204,935 - 101,421,593 (-) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 6 | 81,107,569 - 81,320,050 (-) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 6 | 84,382,732 - 84,595,701 (-) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 6 | 84,382,732 - 84,595,701 (-) | Ensembl | panpan1.1 | | panPan2 | |
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ME1 (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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CanFam3.1 | 12 | 43,623,413 - 43,793,590 (-) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 12 | 43,624,945 - 43,828,775 (-) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 12 | 43,436,816 - 43,632,406 (-) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 12 | 44,390,732 - 44,586,598 (-) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 12 | 44,390,736 - 44,586,656 (-) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 12 | 43,730,159 - 43,925,658 (-) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 12 | 43,679,098 - 43,858,889 (-) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 12 | 43,840,059 - 44,036,221 (-) | NCBI | | UU_Cfam_GSD_1.0 | | |
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ME1 (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
Sscrofa11.1 Ensembl | 1 | 82,799,684 - 82,991,085 (+) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 1 | 82,799,878 - 82,989,895 (+) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 1 | 93,051,393 - 93,241,425 (+) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | | Pig Cytomap | 1 | p12 | NCBI | | | | |
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ME1 (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
ChlSab1.1 | 13 | 7,889,211 - 8,112,793 (-) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 13 | 7,887,984 - 8,112,533 (-) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666040 | 184,102,580 - 184,333,948 (-) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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Me1 (Heterocephalus glaber - naked mole-rat) |
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