Znf502 (zinc finger protein 502) - Rat Genome Database

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Gene: Znf502 (zinc finger protein 502) Ictidomys tridecemlineatus
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Symbol: Znf502
Name: zinc finger protein 502
RGD ID: 124840526
Description: ENCODES a protein that exhibits DNA-binding transcription factor activity, RNA polymerase II-specific (inferred); metal ion binding (inferred); RNA polymerase II transcription regulatory region sequence-specific DNA binding (inferred); INVOLVED IN positive regulation by host of viral process (ortholog); viral release from host cell (ortholog); ASSOCIATED WITH genetic disease (ortholog); FOUND IN nucleus (inferred)
Type: protein-coding
RefSeq Status: MODEL
RGD Orthologs
Human
Mouse
Rat
Bonobo
Dog
Green Monkey
Alliance Genes
More Info more info ...
Latest Assembly: SpeTri2.0 - Squirrel SpeTri2.0 Assembly
Position:
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405118198,594,806 - 198,604,665 (-)NCBIHiC_Itri_2


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component
nucleus  (IEA)

References

Genomics

Comparative Map Data
Znf502
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405118198,594,806 - 198,604,665 (-)NCBIHiC_Itri_2
ZNF502
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38344,712,660 - 44,723,831 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl344,712,643 - 44,723,831 (+)EnsemblGRCh38hg38GRCh38
GRCh37344,754,152 - 44,765,323 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36344,729,142 - 44,740,327 (+)NCBINCBI36Build 36hg18NCBI36
Build 34344,729,141 - 44,740,325NCBI
Celera344,692,121 - 44,703,310 (+)NCBICelera
Cytogenetic Map3p21.31NCBI
HuRef344,798,324 - 44,809,514 (+)NCBIHuRef
CHM1_1344,704,177 - 44,715,366 (+)NCBICHM1_1
T2T-CHM13v2.0344,728,342 - 44,739,513 (+)NCBIT2T-CHM13v2.0
Zfp141
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39742,122,810 - 42,155,171 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl742,122,810 - 42,155,164 (-)EnsemblGRCm39 Ensembl
GRCm38742,473,386 - 42,505,778 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl742,473,386 - 42,505,740 (-)EnsemblGRCm38mm10GRCm38
MGSCv37749,728,756 - 49,761,123 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36742,246,534 - 42,278,906 (-)NCBIMGSCv36mm8
Celera737,155,658 - 37,187,722 (+)NCBICelera
Cytogenetic Map7B3NCBI
cM Map728.25NCBI
Zfp502
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8130,712,974 - 30,737,956 (+)NCBIGRCr8
mRatBN7.2128,884,390 - 28,908,726 (+)NCBImRatBN7.2mRatBN7.2
Rnor_6.0131,494,043 - 31,519,034 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0132,911,255 - 32,945,182 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Celera127,536,231 - 27,561,215 (+)NCBICelera
Cytogenetic Map1p11NCBI
ZNF502
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2244,664,637 - 44,676,448 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1344,669,390 - 44,680,891 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0344,607,484 - 44,618,977 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1345,665,147 - 45,676,361 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl345,665,147 - 45,676,361 (+)Ensemblpanpan1.1panPan2
ZNF501
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12043,542,093 - 43,553,933 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2043,456,331 - 43,465,881 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02044,025,958 - 44,035,304 (-)NCBIROS_Cfam_1.0
UMICH_Zoey_3.12043,264,192 - 43,273,724 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02043,672,118 - 43,681,447 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02043,949,168 - 43,958,507 (-)NCBIUU_Cfam_GSD_1.0
ZNF502
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1226,185,332 - 6,197,057 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl226,193,461 - 6,197,642 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_023666041160,975,513 - 160,987,621 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0


Expression


Sequence


RefSeq Acc Id: XM_040290091   ⟹   XP_040146025
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_024405118198,594,806 - 198,604,651 (-)NCBI
RefSeq Acc Id: XM_040290092   ⟹   XP_040146026
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_024405118198,594,806 - 198,604,665 (-)NCBI
RefSeq Acc Id: XM_040290093   ⟹   XP_040146027
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_024405118198,594,806 - 198,604,649 (-)NCBI
Protein Sequences
Protein RefSeqs XP_040146025 (Get FASTA)   NCBI Sequence Viewer  
  XP_040146026 (Get FASTA)   NCBI Sequence Viewer  
  XP_040146027 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSSTOP00000016034.1
  ENSSTOP00000030881.1
RefSeq Acc Id: XP_040146026   ⟸   XM_040290092
- Peptide Label: isoform X1
- UniProtKB: I3MV89 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_040146025   ⟸   XM_040290091
- Peptide Label: isoform X1
- UniProtKB: I3MV89 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_040146027   ⟸   XM_040290093
- Peptide Label: isoform X2
Protein Domains
C2H2-type


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSSTOG00000028011 UniProtKB/TrEMBL
Ensembl Transcript ENSSTOT00000029598.2 UniProtKB/TrEMBL
  ENSSTOT00000040633.1 UniProtKB/TrEMBL
Gene3D-CATH Classic Zinc Finger UniProtKB/TrEMBL
InterPro Znf_C2H2_sf UniProtKB/TrEMBL
  Znf_C2H2_type UniProtKB/TrEMBL
NCBI Gene Znf502 ENTREZGENE
PANTHER GENE 14408-RELATED UniProtKB/TrEMBL
  ZNF44 PROTEIN UniProtKB/TrEMBL
Pfam zf-C2H2 UniProtKB/TrEMBL
PROSITE ZINC_FINGER_C2H2_1 UniProtKB/TrEMBL
  ZINC_FINGER_C2H2_2 UniProtKB/TrEMBL
SMART ZnF_C2H2 UniProtKB/TrEMBL
Superfamily-SCOP SSF57667 UniProtKB/TrEMBL
UniProt I3MV89 ENTREZGENE, UniProtKB/TrEMBL