Bst2 (bone marrow stromal cell antigen 2) - Rat Genome Database

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Gene: Bst2 (bone marrow stromal cell antigen 2) Ictidomys tridecemlineatus
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Symbol: Bst2
Name: bone marrow stromal cell antigen 2
RGD ID: 124827001
Description: ENCODES a protein that exhibits identical protein binding (ortholog); metalloendopeptidase inhibitor activity (ortholog); protein homodimerization activity (ortholog); INVOLVED IN defense response to virus (ortholog); innate immune response (ortholog); negative regulation of cell growth (ortholog); ASSOCIATED WITH acquired immunodeficiency syndrome (ortholog); endometrial cancer (ortholog); esophagus squamous cell carcinoma (ortholog); FOUND IN cell surface (ortholog); cytoplasm (ortholog); cytosol (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Also known as: bone marrow stromal antigen 2
RGD Orthologs
Human
Alliance Genes
More Info more info ...
Latest Assembly: SpeTri2.0 - Squirrel SpeTri2.0 Assembly
Position:
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405118203,943,513 - 203,944,050 (+)NCBI


References

Genomics

Comparative Map Data
Bst2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405118203,943,513 - 203,944,050 (+)NCBI
BST2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl1917,402,939 - 17,405,630 (-)EnsemblGRCh38hg38GRCh38
GRCh381917,402,939 - 17,405,630 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh371917,513,748 - 17,516,439 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361917,374,755 - 17,377,384 (-)NCBINCBI36hg18NCBI36
Build 341917,374,755 - 17,377,384NCBI
Celera1917,415,480 - 17,418,112 (-)NCBI
Cytogenetic Map19p13.11NCBI
HuRef1917,079,843 - 17,082,475 (-)NCBIHuRef
CHM1_11917,513,253 - 17,515,885 (-)NCBICHM1_1


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts XM_040290293 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide JAESOR010000177 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: XM_040290293   ⟹   XP_040146227
RefSeq Status:
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_024405118203,943,513 - 203,944,050 (+)NCBI
Protein Sequences
Protein RefSeqs XP_040146227 (Get FASTA)   NCBI Sequence Viewer  
Reference Sequences
RefSeq Acc Id: XP_040146227   ⟸   XM_040290293


Additional Information

Database Acc Id Source(s)
NCBI Gene Bst2 ENTREZGENE