Gna11 (G protein subunit alpha 11) - Rat Genome Database

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Gene: Gna11 (G protein subunit alpha 11) Ictidomys tridecemlineatus
Analyze
Symbol: Gna11
Name: G protein subunit alpha 11
RGD ID: 12480861
Description: ENCODES a protein that exhibits alkylglycerophosphoethanolamine phosphodiesterase activity (ortholog); protein-containing complex binding (ortholog); INVOLVED IN action potential (ortholog); cellular response to pH (ortholog); developmental pigmentation (ortholog); PARTICIPATES IN acetylcholine signaling pathway via muscarinic acetylcholine receptors engaging G alphaq protein family; angiotensin II signaling pathway via AT1 receptor; eicosanoid signaling pathway; ASSOCIATED WITH autosomal dominant hypocalcemia 2 (ortholog); CLOVES syndrome (ortholog); congenital heart disease (ortholog); FOUND IN membrane (ortholog); photoreceptor outer segment (ortholog); plasma membrane (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: guanine nucleotide-binding protein subunit alpha-11
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: SpeTri2.0 - Squirrel SpeTri2.0 Assembly
Position:
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405118216,045,637 - 216,064,006 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365881,770,771 - 1,789,170 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365881,770,777 - 1,789,143 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
Gna11
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405118216,045,637 - 216,064,006 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365881,770,771 - 1,789,170 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365881,770,777 - 1,789,143 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
GNA11
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38193,094,362 - 3,123,999 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl193,094,362 - 3,123,999 (+)EnsemblGRCh38hg38GRCh38
GRCh37193,094,360 - 3,123,997 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36193,045,408 - 3,072,468 (+)NCBINCBI36Build 36hg18NCBI36
Build 34193,045,529 - 3,072,452NCBI
Celera193,028,658 - 3,055,719 (+)NCBICelera
Cytogenetic Map19p13.3NCBI
HuRef192,861,199 - 2,888,094 (+)NCBIHuRef
CHM1_1193,110,108 - 3,121,429 (+)NCBICHM1_1
T2T-CHM13v2.0193,068,114 - 3,097,735 (+)NCBIT2T-CHM13v2.0
Gna11
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391081,364,558 - 81,380,996 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1081,364,558 - 81,381,024 (-)EnsemblGRCm39 Ensembl
GRCm381081,528,724 - 81,545,162 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1081,528,724 - 81,545,190 (-)EnsemblGRCm38mm10GRCm38
MGSCv371080,991,477 - 81,007,791 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361080,931,861 - 80,948,175 (-)NCBIMGSCv36mm8
Celera1082,551,913 - 82,568,227 (-)NCBICelera
Cytogenetic Map10C1NCBI
cM Map1039.72NCBI
Gna11
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr878,814,285 - 8,828,628 (+)NCBIGRCr8
mRatBN7.278,163,520 - 8,177,863 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl78,162,750 - 8,179,812 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx711,049,827 - 11,063,675 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0712,925,490 - 12,939,339 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0710,792,631 - 10,806,445 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0711,033,400 - 11,047,284 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl711,033,317 - 11,047,437 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0711,200,712 - 11,214,475 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.479,636,748 - 9,662,492 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.179,636,747 - 9,662,492 (+)NCBI
Celera76,354,654 - 6,368,340 (+)NCBICelera
Cytogenetic Map7q11NCBI
Gna11
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554955,285,380 - 5,302,631 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554955,286,891 - 5,302,631 (-)NCBIChiLan1.0ChiLan1.0
GNA11
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2207,490,517 - 7,520,487 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1196,723,350 - 6,753,319 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0192,120,398 - 2,149,161 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1193,074,484 - 3,102,124 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl193,074,483 - 3,102,124 (+)Ensemblpanpan1.1panPan2
GNA11
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Dog10K_Boxer_Tasha2055,871,216 - 55,890,787 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02056,806,259 - 56,825,830 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2056,806,259 - 56,825,830 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12055,861,412 - 55,880,956 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02056,345,542 - 56,365,145 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02056,544,290 - 56,563,840 (-)NCBIUU_Cfam_GSD_1.0
GNA11
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl275,437,201 - 75,457,092 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1275,439,405 - 75,456,855 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2276,071,093 - 76,088,406 (+)NCBISscrofa10.2Sscrofa10.2susScr3
Pig Cytomap2q21-q24NCBI
GNA11
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.162,858,880 - 2,887,694 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl62,858,937 - 2,887,704 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_0236660815,694,672 - 5,723,312 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Gna11
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248286,077,851 - 6,093,750 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248286,078,485 - 6,093,744 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts XM_005332011 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide JAESOR010000177 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

RefSeq Acc Id: ENSSTOT00000021275   ⟹   ENSSTOP00000021120
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
SpeTri2.0 EnsemblNW_0049365881,770,771 - 1,789,170 (+)Ensembl
RefSeq Acc Id: XM_005332011   ⟹   XP_005332068
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_024405118216,045,637 - 216,064,006 (-)NCBI
SpeTri2.0NW_0049365881,770,777 - 1,789,143 (+)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_005332068 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSSTOP00000015695.2
  ENSSTOP00000021120.1
GenBank Protein KAG3280752 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: XP_005332068   ⟸   XM_005332011
- UniProtKB: I3N9S3 (UniProtKB/TrEMBL),   I3MUA0 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSSTOP00000021120   ⟸   ENSSTOT00000021275


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSSTOG00000019951 Ensembl, UniProtKB/TrEMBL
  ENSSTOG00000024755 UniProtKB/TrEMBL
Ensembl Transcript ENSSTOT00000021275.2 UniProtKB/TrEMBL
  ENSSTOT00000027748.2 UniProtKB/TrEMBL
Gene3D-CATH 1.10.400.10 UniProtKB/TrEMBL
  3.40.50.300 UniProtKB/TrEMBL
InterPro Gprotein_alpha_Q UniProtKB/TrEMBL
  Gprotein_alpha_su UniProtKB/TrEMBL
  GproteinA_insert UniProtKB/TrEMBL
  P-loop_NTPase UniProtKB/TrEMBL
NCBI Gene Gna11 ENTREZGENE
PANTHER GUANINE NUCLEOTIDE-BINDING PROTEIN G(Q) SUBUNIT ALPHA UniProtKB/TrEMBL
  GUANINE NUCLEOTIDE-BINDING PROTEIN SUBUNIT ALPHA-11 UniProtKB/TrEMBL
  PTHR10218 UniProtKB/TrEMBL
Pfam G-alpha UniProtKB/TrEMBL
PRINTS GPROTEINA UniProtKB/TrEMBL
  GPROTEINAQ UniProtKB/TrEMBL
PROSITE G_ALPHA UniProtKB/TrEMBL
SMART G_alpha UniProtKB/TrEMBL
Superfamily-SCOP SSF47895 UniProtKB/TrEMBL
  SSF52540 UniProtKB/TrEMBL
UniProt I3MUA0 ENTREZGENE, UniProtKB/TrEMBL
  I3N9S3 ENTREZGENE, UniProtKB/TrEMBL