Ak7 (adenylate kinase 7) - Rat Genome Database

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Gene: Ak7 (adenylate kinase 7) Ictidomys tridecemlineatus
Analyze
Symbol: Ak7
Name: adenylate kinase 7
RGD ID: 12478346
Description: ENCODES a protein that exhibits (d)CMP kinase activity (inferred); adenylate kinase activity (inferred); ATP binding (inferred); INVOLVED IN axoneme assembly (ortholog); brain development (ortholog); epithelial cilium movement involved in extracellular fluid movement (ortholog); ASSOCIATED WITH hydrocephalus (ortholog); primary ciliary dyskinesia (ortholog); spermatogenic failure 27 (ortholog); FOUND IN cytosol (inferred)
Type: protein-coding
RefSeq Status: MODEL
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: SpeTri2.0 - Squirrel SpeTri2.0 Assembly
Position:
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_0244086409,339,422 - 9,402,271 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936604680,329 - 742,284 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_004936604680,237 - 742,580 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component
cytosol  (IEA)

Molecular Function

References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
Ak7
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_0244086409,339,422 - 9,402,271 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936604680,329 - 742,284 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_004936604680,237 - 742,580 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
AK7
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381496,392,128 - 96,489,427 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1496,392,128 - 96,489,427 (+)EnsemblGRCh38hg38GRCh38
GRCh371496,858,465 - 96,955,764 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361495,928,201 - 96,024,865 (+)NCBINCBI36Build 36hg18NCBI36
Build 341495,928,200 - 96,024,866NCBI
Celera1476,914,175 - 77,010,845 (+)NCBICelera
Cytogenetic Map14q32.2NCBI
HuRef1477,043,535 - 77,140,413 (+)NCBIHuRef
CHM1_11496,797,289 - 96,894,524 (+)NCBICHM1_1
T2T-CHM13v2.01490,623,724 - 90,721,030 (+)NCBIT2T-CHM13v2.0
Ak7
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm3912105,670,115 - 105,748,706 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl12105,672,235 - 105,748,706 (+)EnsemblGRCm39 Ensembl
GRCm3812105,703,858 - 105,782,447 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl12105,705,976 - 105,782,447 (+)EnsemblGRCm38mm10GRCm38
MGSCv3712106,944,192 - 107,020,657 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv3612106,107,032 - 106,183,497 (+)NCBIMGSCv36mm8
Celera12106,940,507 - 107,017,130 (+)NCBICelera
Cytogenetic Map12ENCBI
cM Map1255.95NCBI
Ak7
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr86130,376,499 - 130,444,674 (+)NCBIGRCr8
mRatBN7.26124,611,789 - 124,679,978 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl6124,611,902 - 124,679,961 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx6124,734,223 - 124,803,198 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.06125,029,490 - 125,098,470 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.06124,389,700 - 124,457,780 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.06129,538,648 - 129,606,960 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl6129,538,982 - 129,606,932 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.06138,732,026 - 138,805,327 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.46129,861,499 - 129,933,903 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.16129,865,370 - 129,939,804 (+)NCBI
Celera6122,178,930 - 122,246,130 (+)NCBICelera
Cytogenetic Map6q32NCBI
Ak7
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495543818,178,822 - 18,233,051 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495543818,178,822 - 18,233,051 (+)NCBIChiLan1.0ChiLan1.0
AK7
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21597,552,083 - 97,651,326 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11496,768,587 - 96,867,830 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01477,021,880 - 77,119,037 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11496,344,219 - 96,440,415 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1496,344,240 - 96,440,384 (+)Ensemblpanpan1.1panPan2
AK7
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1865,136,750 - 65,213,589 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl865,136,705 - 65,213,555 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha864,653,322 - 64,730,381 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0865,409,508 - 65,486,864 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl865,409,456 - 65,486,388 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1865,082,340 - 65,159,573 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0865,143,563 - 65,220,637 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0865,467,259 - 65,544,215 (+)NCBIUU_Cfam_GSD_1.0
AK7
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl7117,609,840 - 117,667,455 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.17117,609,791 - 117,667,247 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.27124,867,883 - 124,925,586 (+)NCBISscrofa10.2Sscrofa10.2susScr3
AK7
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12474,275,451 - 74,376,032 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2474,275,637 - 74,377,562 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366605361,426,946 - 61,526,079 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Ak7
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247346,942,374 - 7,001,212 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247346,942,786 - 7,000,453 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression

RNA-SEQ Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts XM_005333927 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide JAESOR010003700 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSSTOT00000016144   ⟹   ENSSTOP00000014450
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
SpeTri2.0 EnsemblNW_004936604680,329 - 742,284 (+)Ensembl
RefSeq Acc Id: XM_005333927   ⟹   XP_005333984
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_0244086409,339,422 - 9,402,271 (-)NCBI
SpeTri2.0NW_004936604680,237 - 742,580 (+)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_005333984 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSSTOP00000014450.3
GenBank Protein KAG3260413 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: XP_005333984   ⟸   XM_005333927
- UniProtKB: I3MQZ7 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSSTOP00000014450   ⟸   ENSSTOT00000016144


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSSTOG00000016138 Ensembl, UniProtKB/TrEMBL
Ensembl Transcript ENSSTOT00000016144.3 UniProtKB/TrEMBL
Gene3D-CATH 3.40.50.300 UniProtKB/TrEMBL
  cAMP-dependent protein kinase regulatory subunit, dimerization-anchoring domain UniProtKB/TrEMBL
  NAD(P)-binding Rossmann-like Domain UniProtKB/TrEMBL
InterPro Adenylat/UMP-CMP_kin UniProtKB/TrEMBL
  DD_AK7 UniProtKB/TrEMBL
  Dpy-30_motif UniProtKB/TrEMBL
  NAD(P)-bd_dom_sf UniProtKB/TrEMBL
  P-loop_NTPase UniProtKB/TrEMBL
NCBI Gene Ak7 ENTREZGENE
PANTHER PTHR23359 UniProtKB/TrEMBL
Pfam ADK UniProtKB/TrEMBL
  Dpy-30 UniProtKB/TrEMBL
Superfamily-SCOP SSF51735 UniProtKB/TrEMBL
  SSF52540 UniProtKB/TrEMBL
UniProt I3MQZ7 ENTREZGENE, UniProtKB/TrEMBL