Gene: CUNH11orf96 (chromosome unknown C11orf96 homolog) Ictidomys tridecemlineatus |
|
Analyze |
|
Symbol: |
CUNH11orf96 (Ensembl: C11orf96) |
Name: |
chromosome unknown C11orf96 homolog |
RGD ID: |
12476970 |
Description: |
ASSOCIATED WITH intellectual disability (ortholog) |
Type: |
protein-coding
|
RefSeq Status: |
MODEL |
Previously known as: |
C11orf96; chromosome unknown open reading frame, human C11orf96; LOC101965061; uncharacterized protein C11orf96 homolog |
RGD Orthologs |
|
Alliance Genes |
|
More Info |
more info ...
|
More Info |
|
Latest Assembly: |
SpeTri2.0 - Squirrel SpeTri2.0 Assembly |
Position: |
Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
HiC_Itri_2 | NW_024404947 | 22,610,226 - 22,611,251 (-) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936562 | 4,722,507 - 4,722,878 (-) | Ensembl | SpeTri2.0 | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936562 | 4,721,868 - 4,722,888 (-) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
|
JBrowse: |
View Region in Genome Browser (JBrowse)
|
Model |
|
Imported Disease Annotations - ClinVar
|
References
Genomics
Comparative Map Data
CUNH11orf96 (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
HiC_Itri_2 | NW_024404947 | 22,610,226 - 22,611,251 (-) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936562 | 4,722,507 - 4,722,878 (-) | Ensembl | SpeTri2.0 | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936562 | 4,721,868 - 4,722,888 (-) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
|
C11orf96 (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCh38 | 11 | 43,942,637 - 43,943,878 (+) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 11 | 43,942,637 - 43,943,878 (+) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 11 | 43,964,187 - 43,965,428 (+) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 11 | 43,903,468 - 43,922,578 (+) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Celera | 11 | 44,109,952 - 44,111,266 (+) | NCBI | | Celera | | | Cytogenetic Map | 11 | p11.2 | NCBI | | | | | HuRef | 11 | 43,673,384 - 43,674,741 (+) | NCBI | | HuRef | | | CHM1_1 | 11 | 43,963,097 - 43,964,424 (+) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 11 | 44,097,987 - 44,099,228 (+) | NCBI | | T2T-CHM13v2.0 | | |
|
Gm13889 (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCm39 | 2 | 93,786,155 - 93,787,445 (-) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 2 | 93,786,155 - 93,787,546 (-) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 2 | 93,955,810 - 93,957,100 (-) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 2 | 93,955,810 - 93,957,201 (-) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 2 | 93,795,967 - 93,797,257 (-) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 2 | 93,756,649 - 93,757,966 (-) | NCBI | | MGSCv36 | mm8 | | Celera | 2 | 95,352,366 - 95,353,346 (-) | NCBI | | Celera | | | Cytogenetic Map | 2 | E1 | NCBI | | | | | cM Map | 2 | 51.62 | NCBI | | | | |
|
C3h11orf96 (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCr8 | 3 | 100,375,474 - 100,376,717 (-) | NCBI | | GRCr8 | | | mRatBN7.2 | 3 | 79,920,125 - 79,921,368 (-) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 3 | 79,920,129 - 79,921,523 (-) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 3 | 83,393,663 - 83,395,055 (-) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 3 | 91,992,753 - 91,994,145 (-) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 3 | 89,838,235 - 89,839,627 (-) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 3 | 82,854,779 - 82,856,171 (-) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 3 | 82,854,777 - 82,856,171 (-) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 3 | 89,555,988 - 89,557,379 (-) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 3 | 78,366,538 - 78,367,930 (-) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | Celera | 3 | 79,121,424 - 79,122,816 (-) | NCBI | | Celera | | | Cytogenetic Map | 3 | q31 | NCBI | | | | |
|
LOC102024473 (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
ChiLan1.0 | NW_004955422 | 3,639,798 - 3,641,449 (-) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
|
C9H11orf96 (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
NHGRI_mPanPan1-v2 | 9 | 46,157,052 - 46,159,397 (+) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 11 | 46,162,989 - 46,165,334 (+) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 11 | 43,902,349 - 43,904,694 (+) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 11 | 44,398,802 - 44,399,763 (+) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | |
|
C18H11orf96 (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
Dog10K_Boxer_Tasha | 18 | 25,535,538 - 25,535,982 (-) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 18 | 26,471,190 - 26,471,634 (-) | NCBI | | ROS_Cfam_1.0 | | | UMICH_Zoey_3.1 | 18 | 25,980,607 - 25,981,051 (-) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 18 | 25,625,855 - 25,626,298 (-) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 18 | 26,238,089 - 26,238,533 (-) | NCBI | | UU_Cfam_GSD_1.0 | | |
|
C2H11orf96 (Sus scrofa - pig) |
|
CUNH11orf96 (Chlorocebus sabaeus - green monkey) |
|
CUNH11orf96 (Heterocephalus glaber - naked mole-rat) |
|
Expression
Sequence
RefSeq Acc Id: |
ENSSTOT00000039572 ⟹ ENSSTOP00000026572 |
Type: |
CODING |
Position: |
Squirrel Assembly | Chr | Position (strand) | Source |
---|
SpeTri2.0 Ensembl | NW_004936562 | 4,722,507 - 4,722,878 (-) | Ensembl |
|
RefSeq Acc Id: |
XM_005330039 ⟹ XP_005330096 |
Type: |
CODING |
Position: |
Squirrel Assembly | Chr | Position (strand) | Source |
---|
HiC_Itri_2 | NW_024404947 | 22,610,226 - 22,611,251 (-) | NCBI | SpeTri2.0 | NW_004936562 | 4,721,868 - 4,722,888 (-) | NCBI |
|
Sequence: |
CGGCGGCGCCATGGCGGCCGCCAAGCCCAGCGAGCTCATGGGCATCTGCTCCAGCTATCAGGCG GTGATGCCGCACTTCGTGTGCCTGGCCGACGAGTTCCCGCAGCCCGTGCGGCCAGCCAAGCTGT CCAAGGGCAAGGGCCGGCTGCGGCGGCCGCGCCAGTCCCGCTTCAAGACGCAGCCGGTGACCTT CGACGAGATCCAGGAGGTGGAAGAGGAGGGGGTGTCCCCCATGGAGGAGGAGAAGGCTAAGAAG TCGTTCCTGCAGAGCCTGGAGTGTCTGCGCCGCAGCACGCAGAGCCTGTCGTTGCAGAGGGAGC AGCTCAGCAGCTGCAAACTGAGGAACAGCCTGGACTCCAGCGACTCCGACTCGGCCCTGTGAGG GGCGCCGCCCGGAGGGGGCACAAGCGCGCTTCCGCGGCCTGCCCGGGGGCCCGCGGATGCACAC CAAGAGGACCCGAGCCCCGCGCCGGGGGTACCCCCTCAGGACCGGGGATCACCACCCCTCGCGC GCTTGGACTCCCGCCCCGCTGCGAACTGGTGGGTGCGCCCTCCGCTGCGCTTGCCCTGGCTCCG GCGCACTCGGGGACGCCAGGGAGGGGGGCTGCTTTCTTTGCCCTTGTAAATGTTTATTTTTTAA CTCTTCCCAGTACGAACTGTGAGTGTGTGCGGGAGGCGGCCCGCGCTGACATGCCCGGGTCTCG CCCGGGTCTCGCCAGGGTAGCCGCTCCACGCCCGTGTCTGATGGTTTGCAACTCCGATTTTGCA CACCGCTCCACCGTGCCCCCCAGAGCACACCTGTTCACACTCACGCCAACACTCTCTCGCTGAA CACTTTTATAATTGTTAGGCGGGCTGATGGGACTTTGGTGCGCAGCGCGGCTGCTGCTGCGGCC CGAGGATTGATATTTATTTTTGCATTGCAACTGCTGGAGGCGTTTATTTAACGATCTTTTTACC CGGATATGTCTGTGAGGCTCCTGAATGGAGACAAATAAAGTCAGTATATTTGCACAGTGTA
hide sequence
|
RefSeq Acc Id: |
XP_005330096 ⟸ XM_005330039 |
- UniProtKB: |
A0A287CZ34 (UniProtKB/TrEMBL) |
- Sequence: |
MAAAKPSELMGICSSYQAVMPHFVCLADEFPQPVRPAKLSKGKGRLRRPRQSRFKTQPVTFDEI QEVEEEGVSPMEEEKAKKSFLQSLECLRRSTQSLSLQREQLSSCKLRNSLDSSDSDSAL
hide sequence
|
RefSeq Acc Id: |
ENSSTOP00000026572 ⟸ ENSSTOT00000039572 |
Additional Information
Nomenclature History
Date |
Current Symbol |
Current Name |
Previous Symbol |
Previous Name |
Description |
Reference |
Status |
2017-07-13 |
CUNH11orf96 |
chromosome unknown C11orf96 homolog |
LOC101965061 |
chromosome unknown open reading frame, human C11orf96 |
Symbol and/or name change |
5135510 |
APPROVED |
|
|