Acot8 (acyl-CoA thioesterase 8) - Rat Genome Database

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Gene: Acot8 (acyl-CoA thioesterase 8) Ictidomys tridecemlineatus
Analyze
Symbol: Acot8
Name: acyl-CoA thioesterase 8
RGD ID: 12475233
Description: ENCODES a protein that exhibits acyl-CoA hydrolase activity (ortholog); choloyl-CoA hydrolase activity (ortholog); long-chain acyl-CoA hydrolase activity (ortholog); INVOLVED IN acyl-CoA metabolic process (ortholog); dicarboxylic acid catabolic process (ortholog); negative regulation of CD4 production (ortholog); ASSOCIATED WITH visual epilepsy (ortholog); FOUND IN peroxisomal matrix (ortholog); peroxisome (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Also known as: acyl-CoA thioesterase 8, transcript variant X1; acyl-CoA thioesterase 8, transcript variant X2; acyl-CoA thioesterase 8, transcript variant X3; acyl-coenzyme A thioesterase 8
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Pig
Green Monkey
Alliance Genes
More Info more info ...
Latest Assembly: SpeTri2.0 - Squirrel SpeTri2.0 Assembly
Position:
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024408640191,713,172 - 191,726,893 (+)NCBI
SpeTri2.0NW_0049365147,166,392 - 7,180,537 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

References

Genomics

Comparative Map Data
Acot8
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024408640191,713,172 - 191,726,893 (+)NCBI
SpeTri2.0NW_0049365147,166,392 - 7,180,537 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ACOT8
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl2045,841,721 - 45,857,405 (-)EnsemblGRCh38hg38GRCh38
GRCh382045,841,721 - 45,857,405 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh372044,470,360 - 44,486,031 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 362043,903,768 - 43,919,442 (-)NCBINCBI36hg18NCBI36
Build 342043,903,767 - 43,919,442NCBI
Celera2041,180,856 - 41,196,530 (-)NCBI
Cytogenetic Map20q13.12NCBI
HuRef2041,212,129 - 41,227,770 (-)NCBIHuRef
CHM1_12044,373,492 - 44,389,180 (-)NCBICHM1_1
Acot8
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm392164,634,688 - 164,662,132 (-)NCBIGRCm39mm39
GRCm39 Ensembl2164,634,685 - 164,646,802 (-)Ensembl
GRCm382164,792,768 - 164,820,219 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl2164,792,765 - 164,804,882 (-)EnsemblGRCm38mm10GRCm38
MGSCv372164,618,268 - 164,630,381 (-)NCBIGRCm37mm9NCBIm37
MGSCv362164,483,973 - 164,496,077 (-)NCBImm8
Celera2170,730,175 - 170,742,288 (-)NCBICelera
Cytogenetic Map2H3NCBI
Acot8
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.23153,531,192 - 153,542,851 (-)NCBImRatBN7.2
mRatBN7.2 Ensembl3153,531,193 - 153,542,851 (-)Ensembl
Rnor_6.03161,260,837 - 161,272,495 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl3161,259,735 - 161,272,460 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.03167,446,048 - 167,457,779 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.43155,828,209 - 155,839,862 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.13155,734,245 - 155,745,898 (-)NCBI
Celera3152,138,819 - 152,150,462 (-)NCBICelera
Cytogenetic Map3q42NCBI
Acot8
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495544511,434,082 - 11,454,806 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495544511,434,649 - 11,454,806 (+)NCBIChiLan1.0ChiLan1.0
ACOT8
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.12043,268,264 - 43,283,989 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2043,268,264 - 43,283,989 (-)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v02042,180,734 - 42,196,466 (-)NCBIMhudiblu_PPA_v0panPan3
ACOT8
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12433,149,415 - 33,163,086 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2433,128,290 - 33,163,050 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2432,676,438 - 32,690,112 (-)NCBI
ROS_Cfam_1.02433,859,698 - 33,873,388 (-)NCBI
UMICH_Zoey_3.12433,118,251 - 33,131,923 (-)NCBI
UNSW_CanFamBas_1.02433,233,332 - 33,246,997 (-)NCBI
UU_Cfam_GSD_1.02433,772,459 - 33,786,134 (-)NCBI
ACOT8
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1748,039,628 - 48,054,335 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11748,039,627 - 48,054,335 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21753,685,696 - 53,700,414 (-)NCBISscrofa10.2Sscrofa10.2susScr3
ACOT8
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1218,026,927 - 18,043,940 (+)NCBI
ChlSab1.1 Ensembl218,027,016 - 18,043,823 (+)Ensembl
Vero_WHO_p1.0NW_02366605066,666,666 - 66,683,894 (+)NCBI


Expression


Sequence


Reference Sequences
RefSeq Acc Id: XM_005325255   ⟹   XP_005325312
RefSeq Status:
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_024408640191,713,172 - 191,726,893 (+)NCBI
SpeTri2.0NW_0049365147,166,818 - 7,180,537 (+)NCBI
Sequence:
RefSeq Acc Id: XM_013358597   ⟹   XP_013214051
RefSeq Status:
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
SpeTri2.0NW_0049365147,166,392 - 7,180,532 (+)NCBI
Sequence:
RefSeq Acc Id: XM_013358598   ⟹   XP_013214052
RefSeq Status:
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
SpeTri2.0NW_0049365147,166,392 - 7,180,532 (+)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_005325312 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein KAG3263541 (Get FASTA)   NCBI Sequence Viewer  
  KAG3263542 (Get FASTA)   NCBI Sequence Viewer  
  KAG3263543 (Get FASTA)   NCBI Sequence Viewer  
Reference Sequences
RefSeq Acc Id: XP_013214051   ⟸   XM_013358597
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_013214052   ⟸   XM_013358598
- Peptide Label: isoform X3
- Sequence:
RefSeq Acc Id: XP_005325312   ⟸   XM_005325255
- UniProtKB: I3M835 (UniProtKB/TrEMBL)
- Sequence:


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSSTOG00000006540 ENTREZGENE
Ensembl Protein ENSSTOP00000005838 ENTREZGENE
NCBI Gene Acot8 ENTREZGENE
UniProt I3M835 ENTREZGENE