Cep128 (centrosomal protein 128) - Rat Genome Database

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Gene: Cep128 (centrosomal protein 128) Ictidomys tridecemlineatus
Analyze
Symbol: Cep128
Name: centrosomal protein 128
RGD ID: 12471692
Description: INVOLVED IN regulation of gene expression (ortholog); sperm flagellum assembly (ortholog); spermatogenesis (ortholog); ASSOCIATED WITH Congenital Nongoitrous Hypothyroidism (ortholog); congenital nongoitrous hypothyroidism 1 (ortholog); Developmental Disabilities (ortholog); FOUND IN centriolar subdistal appendage (inferred); centriole (inferred); centrosome (inferred)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: centrosomal protein of 128 kDa; centrosomal protein of 128 kDa-like; LOC110597762
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: SpeTri2.0 - Squirrel SpeTri2.0 Assembly
Position:
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440864022,649,728 - 23,049,571 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049364889,019,397 - 9,395,068 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049364889,246,498 - 9,419,164 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

References

Genomics

Comparative Map Data
Cep128
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440864022,649,728 - 23,049,571 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049364889,019,397 - 9,395,068 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049364889,246,498 - 9,419,164 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
CEP128
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381480,476,969 - 80,959,502 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1480,476,983 - 80,959,517 (-)EnsemblGRCh38hg38GRCh38
GRCh371480,962,822 - 81,408,082 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361480,032,577 - 80,475,637 (-)NCBINCBI36Build 36hg18NCBI36
Build 341480,032,638 - 80,321,062NCBI
Celera1461,002,764 - 61,445,813 (-)NCBICelera
Cytogenetic Map14q31.1NCBI
HuRef1461,130,468 - 61,573,620 (-)NCBIHuRef
CHM1_11480,903,197 - 81,346,386 (-)NCBICHM1_1
T2T-CHM13v2.01474,687,220 - 75,179,292 (-)NCBIT2T-CHM13v2.0
Cep128
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391290,965,264 - 91,351,207 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1290,965,266 - 91,351,183 (-)EnsemblGRCm39 Ensembl
GRCm381290,998,490 - 91,384,455 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1290,998,492 - 91,384,409 (-)EnsemblGRCm38mm10GRCm38
MGSCv371292,236,932 - 92,622,849 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361291,404,049 - 91,789,935 (-)NCBIMGSCv36mm8
Celera1292,322,688 - 92,705,745 (-)NCBICelera
Cytogenetic Map12D3NCBI
cM Map1244.08NCBI
Cep128
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr86115,681,753 - 116,059,758 (-)NCBIGRCr8
mRatBN7.26109,951,009 - 110,328,686 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl6109,951,061 - 110,328,713 (-)EnsemblmRatBN7.2 Ensembl
Rnor_6.06114,759,474 - 115,158,004 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl6114,759,474 - 115,157,854 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.06124,017,204 - 124,227,173 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Rnor_5.06124,256,848 - 124,412,409 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.46114,627,406 - 115,012,063 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera6107,718,327 - 108,085,031 (-)NCBICelera
Cytogenetic Map6q31NCBI
Cep128
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554384,192,272 - 4,602,300 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554384,194,572 - 4,601,759 (-)NCBIChiLan1.0ChiLan1.0
CEP128
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21581,590,216 - 82,037,894 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11480,800,294 - 81,254,396 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01461,057,348 - 61,505,022 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11480,235,470 - 80,704,684 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1480,257,872 - 80,679,447 (-)Ensemblpanpan1.1panPan2
CEP128
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1852,915,455 - 53,311,963 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl852,916,182 - 53,311,733 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha852,473,604 - 52,870,164 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0853,144,901 - 53,541,908 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl853,145,088 - 53,520,218 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1852,826,781 - 53,223,700 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0852,829,693 - 53,227,370 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0853,222,187 - 53,619,512 (-)NCBIUU_Cfam_GSD_1.0
CEP128
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl7103,345,985 - 103,760,292 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.17103,345,978 - 103,760,323 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.27109,638,794 - 109,893,030 (-)NCBISscrofa10.2Sscrofa10.2susScr3
CEP128
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12457,812,637 - 58,268,404 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2458,065,960 - 58,241,800 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366605345,550,043 - 46,001,102 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Cep128
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462473421,073,758 - 21,506,417 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462473421,073,758 - 21,594,080 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSSTOT00000005846   ⟹   ENSSTOP00000005228
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
SpeTri2.0 EnsemblNW_0049364889,019,397 - 9,395,068 (-)Ensembl
RefSeq Acc Id: ENSSTOT00000037483   ⟹   ENSSTOP00000031059
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
SpeTri2.0 EnsemblNW_0049364889,019,397 - 9,395,068 (-)Ensembl
RefSeq Acc Id: XM_040274763   ⟹   XP_040130697
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440864022,649,731 - 23,049,571 (+)NCBI
RefSeq Acc Id: XM_040274764   ⟹   XP_040130698
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440864022,649,731 - 23,049,571 (+)NCBI
RefSeq Acc Id: XM_040274765   ⟹   XP_040130699
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440864022,649,731 - 23,048,733 (+)NCBI
RefSeq Acc Id: XR_005729154
Type: NON-CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440864022,649,728 - 23,024,406 (+)NCBI
Protein Sequences
Protein RefSeqs XP_040130697 (Get FASTA)   NCBI Sequence Viewer  
  XP_040130698 (Get FASTA)   NCBI Sequence Viewer  
  XP_040130699 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSSTOP00000005228.3
  ENSSTOP00000031059.1
GenBank Protein KAG3260573 (Get FASTA)   NCBI Sequence Viewer  
  KAG3260574 (Get FASTA)   NCBI Sequence Viewer  
Reference Protein Sequences
RefSeq Acc Id: XP_040130697   ⟸   XM_040274763
- Peptide Label: isoform X1
- UniProtKB: I3M6S2 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_040130698   ⟸   XM_040274764
- Peptide Label: isoform X1
- UniProtKB: I3M6S2 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_040130699   ⟸   XM_040274765
- Peptide Label: isoform X2
- UniProtKB: A0A287DC03 (UniProtKB/TrEMBL),   I3M6S2 (UniProtKB/TrEMBL)
RefSeq Acc Id: ENSSTOP00000005228   ⟸   ENSSTOT00000005846
RefSeq Acc Id: ENSSTOP00000031059   ⟸   ENSSTOT00000037483


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSSTOG00000005824 Ensembl, UniProtKB/TrEMBL
Ensembl Transcript ENSSTOT00000005846.3 UniProtKB/TrEMBL
  ENSSTOT00000037483.1 UniProtKB/TrEMBL
InterPro CEP128 UniProtKB/TrEMBL
NCBI Gene Cep128 ENTREZGENE
PANTHER CENTROSOMAL PROTEIN OF 128 KDA UniProtKB/TrEMBL
  PTHR46657 UniProtKB/TrEMBL
UniProt A0A287DC03 ENTREZGENE, UniProtKB/TrEMBL
  I3M6S2 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2021-03-25 Cep128  centrosomal protein 128  LOC110597762  centrosomal protein of 128 kDa-like  Data merged from RGD:13121505 737654 PROVISIONAL