Axin2 (axin 2) - Rat Genome Database

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Gene: Axin2 (axin 2) Ictidomys tridecemlineatus
Analyze
Symbol: Axin2
Name: axin 2
RGD ID: 12471351
Description: ENCODES a protein that exhibits beta-catenin binding (ortholog); enzyme binding (ortholog); I-SMAD binding (ortholog); INVOLVED IN bone mineralization (ortholog); cell death (ortholog); cell population proliferation (ortholog); PARTICIPATES IN altered Wnt signaling, canonical pathway; colorectal cancer pathway; endometrial cancer pathway; ASSOCIATED WITH Animal Disease Models (ortholog); anodontia (ortholog); breast cancer (ortholog); FOUND IN centrosome (ortholog); cytoplasm (ortholog); nucleus (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Also known as: axin 2, transcript variant X1; axin 2, transcript variant X2; axin 2, transcript variant X3; axin 2, transcript variant X4; axin-2
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: SpeTri2.0 - Squirrel SpeTri2.0 Assembly
Position:
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440560211,952,128 - 11,986,668 (-)NCBI
SpeTri2.0NW_0049365417,155,963 - 7,242,466 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

Molecular Pathway Annotations     Click to see Annotation Detail View
References

Genomics

Comparative Map Data
Axin2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440560211,952,128 - 11,986,668 (-)NCBI
SpeTri2.0NW_0049365417,155,963 - 7,242,466 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
AXIN2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl1765,528,563 - 65,561,648 (-)EnsemblGRCh38hg38GRCh38
GRCh381765,528,563 - 65,561,648 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh371763,524,681 - 63,557,766 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361760,955,143 - 60,988,227 (-)NCBINCBI36hg18NCBI36
Build 341760,956,105 - 60,985,289NCBI
Celera1760,094,914 - 60,128,039 (-)NCBI
Cytogenetic Map17q24.1NCBI
HuRef1758,916,746 - 58,949,692 (-)NCBIHuRef
CHM1_11763,588,742 - 63,621,757 (-)NCBICHM1_1
Axin2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm3911108,808,654 - 108,841,609 (+)NCBIGRCm39mm39
GRCm39 Ensembl11108,811,175 - 108,841,609 (+)Ensembl
GRCm3811108,917,828 - 108,950,783 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl11108,920,349 - 108,950,783 (+)EnsemblGRCm38mm10GRCm38
MGSCv3711108,781,663 - 108,812,097 (+)NCBIGRCm37mm9NCBIm37
MGSCv3611108,736,456 - 108,766,873 (+)NCBImm8
Celera11120,655,477 - 120,686,142 (+)NCBICelera
Cytogenetic Map11E1NCBI
cM Map1171.83NCBI
Axin2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.21093,893,830 - 93,927,042 (+)NCBImRatBN7.2
mRatBN7.2 Ensembl1093,899,245 - 93,926,231 (+)Ensembl
Rnor_6.01097,212,483 - 97,238,824 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1097,212,432 - 97,239,642 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01096,933,422 - 96,959,748 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41098,294,466 - 98,321,830 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11098,308,835 - 98,336,196 (+)NCBI
Celera1092,540,720 - 92,589,078 (+)NCBICelera
Cytogenetic Map10q32.1NCBI
Axin2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554784,952,488 - 4,982,225 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554784,952,551 - 4,982,223 (-)NCBIChiLan1.0ChiLan1.0
AXIN2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.11764,688,416 - 64,720,086 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1764,688,416 - 64,720,086 (-)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v01759,476,336 - 59,509,358 (-)NCBIMhudiblu_PPA_v0panPan3
AXIN2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1914,559,476 - 14,588,950 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl914,559,388 - 14,588,530 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha915,451,561 - 15,482,654 (+)NCBI
ROS_Cfam_1.0916,221,743 - 16,252,811 (+)NCBI
UMICH_Zoey_3.1915,167,377 - 15,198,389 (+)NCBI
UNSW_CanFamBas_1.0912,335,210 - 12,366,239 (-)NCBI
UU_Cfam_GSD_1.0912,336,357 - 12,367,417 (-)NCBI
AXIN2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1212,311,293 - 12,343,200 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11212,311,293 - 12,343,207 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21212,654,639 - 12,662,408 (-)NCBISscrofa10.2Sscrofa10.2susScr3
AXIN2
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11655,874,043 - 55,906,739 (+)NCBIChlSab1.1chlSab2
ChlSab1.1 Ensembl1655,874,072 - 55,907,281 (+)EnsemblChlSab1.1chlSab2
Vero_WHO_p1.0NW_02366607726,473,341 - 26,506,608 (+)NCBIVero_WHO_p1.0
Axin2
(Heterocephalus glaber - naked mole-rat)
Naked Mole-rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046248702,803,743 - 2,832,489 (+)NCBIHetGla_female_1.0hetGla2


Expression


Sequence


Reference Sequences
RefSeq Acc Id: XM_013359945   ⟹   XP_013215399
RefSeq Status:
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440560211,952,128 - 11,982,550 (-)NCBI
SpeTri2.0NW_0049365417,212,052 - 7,242,466 (+)NCBI
Sequence:
RefSeq Acc Id: XM_021728422   ⟹   XP_021584097
RefSeq Status:
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440560211,953,251 - 11,980,964 (-)NCBI
SpeTri2.0NW_0049365417,213,663 - 7,241,549 (+)NCBI
Sequence:
RefSeq Acc Id: XM_021728423   ⟹   XP_021584098
RefSeq Status:
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440560211,953,251 - 11,982,517 (-)NCBI
SpeTri2.0NW_0049365417,212,101 - 7,242,460 (+)NCBI
Sequence:
RefSeq Acc Id: XM_040268562   ⟹   XP_040124496
RefSeq Status:
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440560211,953,251 - 11,986,668 (-)NCBI
RefSeq Acc Id: XM_040268563   ⟹   XP_040124497
RefSeq Status:
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440560211,952,128 - 11,982,550 (-)NCBI
Reference Sequences
RefSeq Acc Id: XP_013215399   ⟸   XM_013359945
- Peptide Label: isoform X1
- UniProtKB: I3N719 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_021584098   ⟸   XM_021728423
- Peptide Label: isoform X2
- Sequence:
RefSeq Acc Id: XP_021584097   ⟸   XM_021728422
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_040124497   ⟸   XM_040268563
- Peptide Label: isoform X3
RefSeq Acc Id: XP_040124496   ⟸   XM_040268562
- Peptide Label: isoform X1


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSSTOG00000024957 ENTREZGENE
Ensembl Protein ENSSTOP00000020165 ENTREZGENE
NCBI Gene Axin2 ENTREZGENE
UniProt I3N719 ENTREZGENE