Mtarc1 (mitochondrial amidoxime reducing component 1) - Rat Genome Database

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Gene: Mtarc1 (mitochondrial amidoxime reducing component 1) Ictidomys tridecemlineatus
Analyze
Symbol: Mtarc1
Name: mitochondrial amidoxime reducing component 1
RGD ID: 12471114
Description: ENCODES a protein that exhibits nitrite reductase (NO-forming) activity (ortholog); INVOLVED IN cellular detoxification of nitrogen compound (inferred); nitrate metabolic process (inferred); nitric oxide biosynthetic process (inferred); ASSOCIATED WITH amphetamine abuse (ortholog); gastrointestinal stromal tumor (ortholog); genetic disease (ortholog); FOUND IN membrane (inferred); mitochondrial inner membrane (inferred); mitochondrion (inferred)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: Marc1; mitochondrial amidoxime reducing component 1, transcript variant X1; mitochondrial amidoxime reducing component 1, transcript variant X2; mitochondrial amidoxime-reducing component 1
RGD Orthologs
Human
Mouse
Rat
Bonobo
Dog
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: SpeTri2.0 - Squirrel SpeTri2.0 Assembly
Position:
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440934456,229,847 - 56,255,778 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049366501,478,037 - 1,504,611 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049366501,477,138 - 1,504,501 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
Mtarc1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440934456,229,847 - 56,255,778 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049366501,478,037 - 1,504,611 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049366501,477,138 - 1,504,501 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
MTARC1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381220,786,913 - 220,819,659 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1220,786,352 - 220,819,659 (+)EnsemblGRCh38hg38GRCh38
GRCh371220,960,255 - 220,993,001 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361219,026,894 - 219,054,353 (+)NCBINCBI36Build 36hg18NCBI36
Celera1194,179,397 - 194,207,116 (+)NCBICelera
Cytogenetic Map1q41NCBI
HuRef1191,634,656 - 191,662,358 (+)NCBIHuRef
CHM1_11222,232,498 - 222,260,205 (+)NCBICHM1_1
T2T-CHM13v2.01220,026,620 - 220,059,373 (+)NCBIT2T-CHM13v2.0
Mtarc1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391184,518,964 - 184,543,622 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1184,518,964 - 184,543,394 (-)EnsemblGRCm39 Ensembl
GRCm381184,786,767 - 184,811,743 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1184,786,767 - 184,811,313 (-)EnsemblGRCm38mm10GRCm38
MGSCv371186,610,646 - 186,635,192 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361186,487,555 - 186,512,101 (-)NCBIMGSCv36mm8
Celera1191,748,956 - 191,773,778 (-)NCBICelera
Cytogenetic Map1H5NCBI
cM Map189.07NCBI
Mtarc1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81398,854,235 - 98,894,208 (-)NCBIGRCr8
mRatBN7.21396,324,377 - 96,362,677 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1396,339,757 - 96,397,796 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1398,845,403 - 98,868,427 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.013100,244,818 - 100,267,603 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01397,427,640 - 97,450,660 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.013102,693,679 - 102,724,120 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl13102,698,546 - 102,721,218 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.013107,375,873 - 107,398,500 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.413100,747,272 - 100,806,258 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera1395,859,205 - 95,880,141 (-)NCBICelera
Cytogenetic Map13q26NCBI
MTARC1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2128,585,807 - 28,613,469 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1128,547,598 - 28,575,285 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01196,373,028 - 196,405,115 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11201,407,483 - 201,435,186 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1201,407,390 - 201,435,186 (+)Ensemblpanpan1.1panPan2
MTARC1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.13815,460,548 - 15,490,941 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl3815,463,548 - 15,532,241 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha3815,501,865 - 15,532,434 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.03815,496,387 - 15,527,068 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl3815,451,494 - 15,522,862 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.13815,503,851 - 15,534,357 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.03815,858,250 - 15,883,444 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.03816,151,276 - 16,181,816 (+)NCBIUU_Cfam_GSD_1.0
MTARC1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1010,190,835 - 10,216,175 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11010,190,759 - 10,264,467 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21012,257,867 - 12,288,355 (-)NCBISscrofa10.2Sscrofa10.2susScr3
MTARC1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1258,654,316 - 8,744,579 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl258,717,436 - 8,743,652 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_0236660559,000,217 - 9,029,492 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Mtarc1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248354,164,672 - 4,177,365 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248354,164,755 - 4,177,931 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSSTOT00000006682   ⟹   ENSSTOP00000005975
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
SpeTri2.0 EnsemblNW_0049366501,478,037 - 1,504,611 (-)Ensembl
RefSeq Acc Id: XM_005335857   ⟹   XP_005335914
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440934456,229,847 - 56,255,778 (-)NCBI
SpeTri2.0NW_0049366501,477,138 - 1,504,501 (-)NCBI
Sequence:
RefSeq Acc Id: XM_040276835   ⟹   XP_040132769
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440934456,229,847 - 56,254,774 (-)NCBI
Protein Sequences
Protein RefSeqs XP_005335914 (Get FASTA)   NCBI Sequence Viewer  
  XP_040132769 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSSTOP00000005975.3
GenBank Protein KAG3258053 (Get FASTA)   NCBI Sequence Viewer  
  KAG3258054 (Get FASTA)   NCBI Sequence Viewer  
Reference Protein Sequences
RefSeq Acc Id: XP_005335914   ⟸   XM_005335857
- Peptide Label: isoform X1
- UniProtKB: I3M8C5 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_040132769   ⟸   XM_040276835
- Peptide Label: isoform X2
RefSeq Acc Id: ENSSTOP00000005975   ⟸   ENSSTOT00000006682
Protein Domains
MOSC


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSSTOG00000006692 Ensembl, UniProtKB/TrEMBL
Ensembl Transcript ENSSTOT00000006682.3 UniProtKB/TrEMBL
InterPro MoCF_Sase_C UniProtKB/TrEMBL
  MOSC_N UniProtKB/TrEMBL
  Pyrv_Knase-like_insert_dom_sf UniProtKB/TrEMBL
NCBI Gene Marc1 ENTREZGENE
PANTHER MITOCHONDRIAL AMIDOXIME-REDUCING COMPONENT 1 UniProtKB/TrEMBL
  MOLYBDOPTERIN COFACTOR SULFURASE MOSC UniProtKB/TrEMBL
Pfam MOSC UniProtKB/TrEMBL
  MOSC_N UniProtKB/TrEMBL
PROSITE MOSC UniProtKB/TrEMBL
Superfamily-SCOP MOSC N-terminal domain-like UniProtKB/TrEMBL
  SSF50800 UniProtKB/TrEMBL
UniProt I3M8C5 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2019-10-01 Mtarc1  mitochondrial amidoxime reducing component 1  Marc1  mitochondrial amidoxime reducing component 1  Symbol and/or name change 5135510 APPROVED