Dlg1 (discs large MAGUK scaffold protein 1) - Rat Genome Database

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Gene: Dlg1 (discs large MAGUK scaffold protein 1) Ictidomys tridecemlineatus
Analyze
Symbol: Dlg1
Name: discs large MAGUK scaffold protein 1
RGD ID: 12469543
Description: ENCODES a protein that exhibits ionotropic glutamate receptor binding (ortholog); kinesin binding (ortholog); PDZ domain binding (ortholog); INVOLVED IN actin filament polymerization (ortholog); amyloid precursor protein metabolic process (ortholog); branching involved in ureteric bud morphogenesis (ortholog); PARTICIPATES IN acebutolol pharmacodynamics pathway; adrenergic beta receptor agonist and beta-blocker pharmacodynamics pathway; amiodarone pharmacodynamics pathway; ASSOCIATED WITH autistic disorder (ortholog); cervix uteri carcinoma in situ (ortholog); chromosome 3q29 microdeletion syndrome (ortholog); FOUND IN basal plasma membrane (ortholog); cytosol (ortholog); dendrite (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: discs large MAGUK scaffold protein 1, transcript variant X1; discs large MAGUK scaffold protein 1, transcript variant X10; discs large MAGUK scaffold protein 1, transcript variant X11; discs large MAGUK scaffold protein 1, transcript variant X12; discs large MAGUK scaffold protein 1, transcript variant X13; discs large MAGUK scaffold protein 1, transcript variant X14; discs large MAGUK scaffold protein 1, transcript variant X15; discs large MAGUK scaffold protein 1, transcript variant X16; discs large MAGUK scaffold protein 1, transcript variant X17; discs large MAGUK scaffold protein 1, transcript variant X18; discs large MAGUK scaffold protein 1, transcript variant X19; discs large MAGUK scaffold protein 1, transcript variant X2; discs large MAGUK scaffold protein 1, transcript variant X3; discs large MAGUK scaffold protein 1, transcript variant X4; discs large MAGUK scaffold protein 1, transcript variant X5; discs large MAGUK scaffold protein 1, transcript variant X6; discs large MAGUK scaffold protein 1, transcript variant X7; discs large MAGUK scaffold protein 1, transcript variant X8; discs large MAGUK scaffold protein 1, transcript variant X9; disks large homolog 1
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: SpeTri2.0 - Squirrel SpeTri2.0 Assembly
Position:
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405602143,094,725 - 143,350,067 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936833551,799 - 844,121 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_004936833551,989 - 843,064 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process
actin filament organization  (IEA)
actin filament polymerization  (IEA,ISO)
amyloid precursor protein metabolic process  (IEA,ISO)
astral microtubule organization  (IEA)
bicellular tight junction assembly  (IEA)
branching involved in ureteric bud morphogenesis  (IEA,ISO)
cell adhesion  (ISO)
cell population proliferation  (IEA,ISO)
cell-cell adhesion  (IEA)
cellular response to brain-derived neurotrophic factor stimulus  (ISO)
cerebral cortex development  (ISO)
chemical synaptic transmission  (IEA)
cortical actin cytoskeleton organization  (IEA)
cortical microtubule organization  (IEA)
embryonic skeletal system morphogenesis  (IEA,ISO)
endothelial cell proliferation  (IEA)
establishment of centrosome localization  (IEA)
establishment or maintenance of epithelial cell apical/basal polarity  (IEA)
hard palate development  (IEA,ISO)
immunological synapse formation  (IEA,ISO)
lens development in camera-type eye  (IEA,ISO)
maintenance of postsynaptic density structure  (IEA)
membrane raft organization  (IEA,ISO)
negative regulation of epithelial cell proliferation  (IEA,ISO)
negative regulation of ERK1 and ERK2 cascade  (IEA)
negative regulation of G1/S transition of mitotic cell cycle  (IEA)
negative regulation of p38MAPK cascade  (IEA)
negative regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction  (IEA,ISO)
negative regulation of T cell proliferation  (IEA,ISO)
negative regulation of transcription by RNA polymerase II  (IEA)
neurotransmitter receptor localization to postsynaptic specialization membrane  (IEA)
peristalsis  (IEA,ISO)
phosphatidylinositol 3-kinase/protein kinase B signal transduction  (IEA,ISO)
positive regulation of actin filament polymerization  (IEA,ISO)
positive regulation of cell population proliferation  (IEA,ISO)
positive regulation of gene expression  (ISO)
positive regulation of potassium ion transport  (IEA,ISO)
positive regulation of protein localization to plasma membrane  (IEA)
protein localization  (IEA,ISO)
protein localization to plasma membrane  (IEA)
protein-containing complex localization  (IEA)
receptor clustering  (IEA)
regulation of cell shape  (IEA)
regulation of membrane potential  (IEA,ISO)
regulation of myelination  (IEA,ISO)
regulation of non-canonical NF-kappaB signal transduction  (ISO)
regulation of potassium ion export across plasma membrane  (IEA)
regulation of potassium ion import  (IEA)
regulation of protein localization  (ISO)
regulation of protein localization to synapse  (IEA)
regulation of ventricular cardiac muscle cell action potential  (IEA)
reproductive structure development  (IEA,ISO)
smooth muscle tissue development  (IEA,ISO)
T cell activation  (IEA,ISO)
T cell proliferation  (IEA,ISO)
tissue morphogenesis  (IEA,ISO)
ureteric bud development  (IEA,ISO)

Molecular Pathway Annotations     Click to see Annotation Detail View
acebutolol pharmacodynamics pathway   (ISO)
adrenergic beta receptor agonist and beta-blocker pharmacodynamics pathway  (ISO)
amiodarone pharmacodynamics pathway  (ISO)
amlodipine pharmacodynamics pathway  (ISO)
atenolol pharmacodynamics pathway  (ISO)
betaxolol pharmacodynamics pathway  (ISO)
bisoprolol pharmacodynamics pathway  (ISO)
bupranolol drug pathway  (ISO)
bupranolol pharmacodynamics pathway   (ISO)
calcium/calmodulin dependent kinase 2 signaling pathway  (ISO)
carvedilol pharmacodynamics pathway  (ISO)
diltiazem pharmacodynamics pathway  (ISO)
disopyramide pharmacodynamics pathway  (ISO)
dobutamine pharmacodynamics pathway  (ISO)
E-cadherin signaling pathway  (ISO)
esmolol pharmacodynamics pathway  (ISO)
flecainde pharmacodynamics pathway  (ISO)
fosphenytoin pharmacodynamics pathway  (ISO)
ibutilide pharmacodynamics pathway  (ISO)
isoprenaline pharmacodynamics pathway  (ISO)
isradipine pharmacodynamics pathway  (ISO)
levobunolol pharmacodynamics pathway  (ISO)
lidocaine pharmacodynamics pathway  (ISO)
metoprolol pharmacodynamics pathway  (ISO)
mexiletine pharmacodynamics pathway  (ISO)
nadolol pharmacodynamics pathway  (ISO)
nebivolol pharmacodynamics pathway  (ISO)
nifedipine pharmacodynamics pathway  (ISO)
nimodipine pharmacodynamics pathway  (ISO)
nisoldipine pharmacodynamics pathway  (ISO)
nitrendipine pharmacodynamics pathway  (ISO)
penbutolol pharmacodynamics pathway  (ISO)
phenytoin pharmacodynamics pathway  (ISO)
pindolol pharmacodynamics pathway  (ISO)
procainamide pharmacodynamics pathway  (ISO)
propranolol pharmacodynamics pathway  (ISO)
quinidine pharmacodynamics pathway  (ISO)
sotalol pharmacodynamics pathway  (ISO)
timolol pharmacodynamics pathway  (ISO)
verapamil pharmacodynamics pathway  (ISO)

References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
Dlg1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405602143,094,725 - 143,350,067 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936833551,799 - 844,121 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_004936833551,989 - 843,064 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
DLG1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh383197,042,560 - 197,299,321 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl3197,042,560 - 197,299,330 (-)EnsemblGRCh38hg38GRCh38
GRCh373196,769,431 - 197,026,192 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 363198,253,828 - 198,509,844 (-)NCBINCBI36Build 36hg18NCBI36
Build 343198,259,732 - 198,513,757NCBI
Celera3195,354,807 - 195,610,760 (-)NCBICelera
Cytogenetic Map3q29NCBI
HuRef3194,068,872 - 194,324,699 (-)NCBIHuRef
CHM1_13196,740,135 - 196,996,273 (-)NCBICHM1_1
T2T-CHM13v2.03199,768,533 - 200,020,586 (-)NCBIT2T-CHM13v2.0
Dlg1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391631,482,261 - 31,692,174 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1631,482,261 - 31,693,947 (+)EnsemblGRCm39 Ensembl
GRCm381631,663,443 - 31,873,356 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1631,663,443 - 31,875,129 (+)EnsemblGRCm38mm10GRCm38
MGSCv371631,664,125 - 31,873,432 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361631,583,786 - 31,793,093 (+)NCBIMGSCv36mm8
Celera1632,162,337 - 32,367,214 (+)NCBICelera
Cytogenetic Map16B2NCBI
cM Map1622.4NCBI
Dlg1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81182,416,853 - 82,607,797 (-)NCBIGRCr8
mRatBN7.21168,911,883 - 69,103,230 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1168,911,883 - 69,102,689 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_WKY_Bbb_1.0PNS010000782.1738 - 5,614 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
UTH_Rnor_WKY_Bbb_1.0PNS010000869.13,863 - 29,596 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01172,164,566 - 72,378,895 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1172,163,749 - 72,378,895 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01175,389,409 - 75,454,358 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Rnor_5.01175,239,783 - 75,349,409 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41170,735,283 - 70,930,374 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11170,792,871 - 70,987,963 (-)NCBI
Celera1168,335,260 - 68,524,109 (-)NCBICelera
Cytogenetic Map11q22NCBI
Dlg1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495542013,068,289 - 13,273,805 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495542013,068,289 - 13,273,805 (-)NCBIChiLan1.0ChiLan1.0
DLG1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22194,912,403 - 195,173,774 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan13194,917,123 - 195,178,690 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v03194,386,263 - 194,648,015 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.13204,319,410 - 204,586,232 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl3204,323,724 - 204,584,987 (-)Ensemblpanpan1.1panPan2
DLG1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.13330,016,323 - 30,253,180 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl3330,016,600 - 30,253,547 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha3330,039,726 - 30,276,522 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.03330,264,744 - 30,502,044 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl3330,264,748 - 30,501,362 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.13330,059,072 - 30,295,858 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.03330,096,091 - 30,333,239 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.03330,717,286 - 30,954,124 (-)NCBIUU_Cfam_GSD_1.0
DLG1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl13132,820,870 - 133,086,841 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.113132,819,931 - 133,084,880 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.213142,336,324 - 142,629,113 (+)NCBISscrofa10.2Sscrofa10.2susScr3
DLG1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11589,937,900 - 90,214,976 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1590,055,964 - 90,215,652 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366604163,711,831 - 63,988,641 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Dlg1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462473062,002,280 - 62,223,319 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462473062,001,547 - 62,223,098 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts XM_005340962 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_005340963 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_005340964 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_013365535 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_013365536 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021720631 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021720632 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021720633 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021720634 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021720635 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021720636 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021720637 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021720638 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021720639 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021720640 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021720641 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021720642 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021720643 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021720645 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_040270428 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_040270429 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_040270430 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_040270431 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_040270432 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_040270433 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_040270434 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_040270435 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_040270436 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_040270438 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide JAESOR010000662 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSSTOT00000005419   ⟹   ENSSTOP00000004849
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
SpeTri2.0 EnsemblNW_004936833700,020 - 841,312 (+)Ensembl
RefSeq Acc Id: ENSSTOT00000032321   ⟹   ENSSTOP00000028499
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
SpeTri2.0 EnsemblNW_004936833587,695 - 844,121 (+)Ensembl
RefSeq Acc Id: ENSSTOT00000036882   ⟹   ENSSTOP00000029179
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
SpeTri2.0 EnsemblNW_004936833587,749 - 843,064 (+)Ensembl
RefSeq Acc Id: ENSSTOT00000039171   ⟹   ENSSTOP00000027130
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
SpeTri2.0 EnsemblNW_004936833587,695 - 844,121 (+)Ensembl
RefSeq Acc Id: ENSSTOT00000040500   ⟹   ENSSTOP00000024613
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
SpeTri2.0 EnsemblNW_004936833587,749 - 843,064 (+)Ensembl
RefSeq Acc Id: ENSSTOT00000042241   ⟹   ENSSTOP00000027224
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
SpeTri2.0 EnsemblNW_004936833551,799 - 844,121 (+)Ensembl
RefSeq Acc Id: XM_005340962   ⟹   XP_005341019
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_024405602143,094,725 - 143,349,998 (-)NCBI
SpeTri2.0NW_004936833587,777 - 843,064 (+)NCBI
Sequence:
RefSeq Acc Id: XM_005340963   ⟹   XP_005341020
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_024405602143,094,725 - 143,350,067 (-)NCBI
SpeTri2.0NW_004936833587,778 - 843,064 (+)NCBI
Sequence:
RefSeq Acc Id: XM_005340964   ⟹   XP_005341021
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_024405602143,094,725 - 143,350,067 (-)NCBI
SpeTri2.0NW_004936833587,779 - 843,064 (+)NCBI
Sequence:
RefSeq Acc Id: XM_013365535   ⟹   XP_013220989
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_024405602143,094,725 - 143,350,067 (-)NCBI
SpeTri2.0NW_004936833587,777 - 843,064 (+)NCBI
Sequence:
RefSeq Acc Id: XM_013365536   ⟹   XP_013220990
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_024405602143,094,725 - 143,349,998 (-)NCBI
SpeTri2.0NW_004936833587,778 - 843,064 (+)NCBI
Sequence:
RefSeq Acc Id: XM_021720631   ⟹   XP_021576306
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_024405602143,094,725 - 143,349,998 (-)NCBI
SpeTri2.0NW_004936833587,776 - 843,064 (+)NCBI
Sequence:
RefSeq Acc Id: XM_021720632   ⟹   XP_021576307
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_024405602143,094,725 - 143,349,539 (-)NCBI
SpeTri2.0NW_004936833588,228 - 843,064 (+)NCBI
Sequence:
RefSeq Acc Id: XM_021720635   ⟹   XP_021576310
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_024405602143,094,725 - 143,349,998 (-)NCBI
SpeTri2.0NW_004936833587,776 - 843,064 (+)NCBI
Sequence:
RefSeq Acc Id: XM_021720636   ⟹   XP_021576311
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_024405602143,094,725 - 143,349,998 (-)NCBI
SpeTri2.0NW_004936833587,776 - 843,064 (+)NCBI
Sequence:
RefSeq Acc Id: XM_021720637   ⟹   XP_021576312
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_024405602143,094,725 - 143,349,998 (-)NCBI
SpeTri2.0NW_004936833587,777 - 843,064 (+)NCBI
Sequence:
RefSeq Acc Id: XM_021720638   ⟹   XP_021576313
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_024405602143,094,725 - 143,349,998 (-)NCBI
SpeTri2.0NW_004936833587,777 - 843,064 (+)NCBI
Sequence:
RefSeq Acc Id: XM_021720639   ⟹   XP_021576314
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_024405602143,094,725 - 143,349,965 (-)NCBI
SpeTri2.0NW_004936833587,777 - 843,064 (+)NCBI
Sequence:
RefSeq Acc Id: XM_021720640   ⟹   XP_021576315
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_024405602143,094,725 - 143,312,660 (-)NCBI
SpeTri2.0NW_004936833625,607 - 843,064 (+)NCBI
Sequence:
RefSeq Acc Id: XM_021720641   ⟹   XP_021576316
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_024405602143,094,725 - 143,238,152 (-)NCBI
SpeTri2.0NW_004936833699,265 - 843,064 (+)NCBI
Sequence:
RefSeq Acc Id: XM_021720642   ⟹   XP_021576317
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_024405602143,094,725 - 143,238,150 (-)NCBI
SpeTri2.0NW_004936833699,266 - 843,064 (+)NCBI
Sequence:
RefSeq Acc Id: XM_021720643   ⟹   XP_021576318
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_024405602143,094,725 - 143,238,149 (-)NCBI
SpeTri2.0NW_004936833699,266 - 843,064 (+)NCBI
Sequence:
RefSeq Acc Id: XM_021720645   ⟹   XP_021576320
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_024405602143,094,725 - 143,238,152 (-)NCBI
SpeTri2.0NW_004936833699,265 - 843,064 (+)NCBI
Sequence:
RefSeq Acc Id: XM_040270428   ⟹   XP_040126362
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_024405602143,094,725 - 143,350,067 (-)NCBI
RefSeq Acc Id: XM_040270429   ⟹   XP_040126363
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_024405602143,094,725 - 143,350,067 (-)NCBI
RefSeq Acc Id: XM_040270430   ⟹   XP_040126364
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_024405602143,094,725 - 143,350,067 (-)NCBI
RefSeq Acc Id: XM_040270431   ⟹   XP_040126365
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_024405602143,094,725 - 143,349,998 (-)NCBI
RefSeq Acc Id: XM_040270432   ⟹   XP_040126366
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_024405602143,094,725 - 143,350,067 (-)NCBI
RefSeq Acc Id: XM_040270433   ⟹   XP_040126367
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_024405602143,094,725 - 143,350,067 (-)NCBI
RefSeq Acc Id: XM_040270434   ⟹   XP_040126368
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_024405602143,094,725 - 143,349,964 (-)NCBI
RefSeq Acc Id: XM_040270435   ⟹   XP_040126369
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_024405602143,094,725 - 143,350,067 (-)NCBI
RefSeq Acc Id: XM_040270436   ⟹   XP_040126370
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_024405602143,094,725 - 143,238,154 (-)NCBI
RefSeq Acc Id: XM_040270438   ⟹   XP_040126372
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_024405602143,094,725 - 143,238,151 (-)NCBI
Protein Sequences
Protein RefSeqs XP_005341019 (Get FASTA)   NCBI Sequence Viewer  
  XP_005341020 (Get FASTA)   NCBI Sequence Viewer  
  XP_005341021 (Get FASTA)   NCBI Sequence Viewer  
  XP_013220989 (Get FASTA)   NCBI Sequence Viewer  
  XP_013220990 (Get FASTA)   NCBI Sequence Viewer  
  XP_021576306 (Get FASTA)   NCBI Sequence Viewer  
  XP_021576307 (Get FASTA)   NCBI Sequence Viewer  
  XP_021576310 (Get FASTA)   NCBI Sequence Viewer  
  XP_021576311 (Get FASTA)   NCBI Sequence Viewer  
  XP_021576312 (Get FASTA)   NCBI Sequence Viewer  
  XP_021576313 (Get FASTA)   NCBI Sequence Viewer  
  XP_021576314 (Get FASTA)   NCBI Sequence Viewer  
  XP_021576315 (Get FASTA)   NCBI Sequence Viewer  
  XP_021576316 (Get FASTA)   NCBI Sequence Viewer  
  XP_021576317 (Get FASTA)   NCBI Sequence Viewer  
  XP_021576318 (Get FASTA)   NCBI Sequence Viewer  
  XP_021576320 (Get FASTA)   NCBI Sequence Viewer  
  XP_040126362 (Get FASTA)   NCBI Sequence Viewer  
  XP_040126363 (Get FASTA)   NCBI Sequence Viewer  
  XP_040126364 (Get FASTA)   NCBI Sequence Viewer  
  XP_040126365 (Get FASTA)   NCBI Sequence Viewer  
  XP_040126366 (Get FASTA)   NCBI Sequence Viewer  
  XP_040126367 (Get FASTA)   NCBI Sequence Viewer  
  XP_040126368 (Get FASTA)   NCBI Sequence Viewer  
  XP_040126369 (Get FASTA)   NCBI Sequence Viewer  
  XP_040126370 (Get FASTA)   NCBI Sequence Viewer  
  XP_040126372 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSSTOP00000004849.3
  ENSSTOP00000024613.1
  ENSSTOP00000027130.1
  ENSSTOP00000027224.1
  ENSSTOP00000028499.1
  ENSSTOP00000029179.1
GenBank Protein KAG3271549 (Get FASTA)   NCBI Sequence Viewer  
  KAG3271550 (Get FASTA)   NCBI Sequence Viewer  
  KAG3271551 (Get FASTA)   NCBI Sequence Viewer  
  KAG3271552 (Get FASTA)   NCBI Sequence Viewer  
  KAG3271553 (Get FASTA)   NCBI Sequence Viewer  
  KAG3271554 (Get FASTA)   NCBI Sequence Viewer  
  KAG3271555 (Get FASTA)   NCBI Sequence Viewer  
  KAG3271556 (Get FASTA)   NCBI Sequence Viewer  
  KAG3271557 (Get FASTA)   NCBI Sequence Viewer  
  KAG3271558 (Get FASTA)   NCBI Sequence Viewer  
  KAG3271559 (Get FASTA)   NCBI Sequence Viewer  
  KAG3271560 (Get FASTA)   NCBI Sequence Viewer  
  KAG3271561 (Get FASTA)   NCBI Sequence Viewer  
  KAG3271562 (Get FASTA)   NCBI Sequence Viewer  
  KAG3271563 (Get FASTA)   NCBI Sequence Viewer  
  KAG3271564 (Get FASTA)   NCBI Sequence Viewer  
  KAG3271565 (Get FASTA)   NCBI Sequence Viewer  
  KAG3271566 (Get FASTA)   NCBI Sequence Viewer  
  KAG3271567 (Get FASTA)   NCBI Sequence Viewer  
Reference Protein Sequences
RefSeq Acc Id: XP_005341019   ⟸   XM_005340962
- Peptide Label: isoform X4
- UniProtKB: A0A287CTL4 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_013220989   ⟸   XM_013365535
- Peptide Label: isoform X5
- Sequence:
RefSeq Acc Id: XP_013220990   ⟸   XM_013365536
- Peptide Label: isoform X9
- Sequence:
RefSeq Acc Id: XP_005341020   ⟸   XM_005340963
- Peptide Label: isoform X11
- Sequence:
RefSeq Acc Id: XP_005341021   ⟸   XM_005340964
- Peptide Label: isoform X15
- UniProtKB: A0A287D6K1 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_021576306   ⟸   XM_021720631
- Peptide Label: isoform X1
- UniProtKB: A0A287D122 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_021576311   ⟸   XM_021720636
- Peptide Label: isoform X3
- Sequence:
RefSeq Acc Id: XP_021576310   ⟸   XM_021720635
- Peptide Label: isoform X2
- Sequence:
RefSeq Acc Id: XP_021576312   ⟸   XM_021720637
- Peptide Label: isoform X6
- UniProtKB: A0A287D4P7 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_021576313   ⟸   XM_021720638
- Peptide Label: isoform X7
- Sequence:
RefSeq Acc Id: XP_021576314   ⟸   XM_021720639
- Peptide Label: isoform X8
- Sequence:
RefSeq Acc Id: XP_021576307   ⟸   XM_021720632
- Peptide Label: isoform X1
- UniProtKB: A0A287D122 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_021576315   ⟸   XM_021720640
- Peptide Label: isoform X17
- Sequence:
RefSeq Acc Id: XP_021576320   ⟸   XM_021720645
- Peptide Label: isoform X18
- UniProtKB: I3M613 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_021576316   ⟸   XM_021720641
- Peptide Label: isoform X19
- Sequence:
RefSeq Acc Id: XP_021576317   ⟸   XM_021720642
- Peptide Label: isoform X21
- Sequence:
RefSeq Acc Id: XP_021576318   ⟸   XM_021720643
- Peptide Label: isoform X22
- Sequence:
RefSeq Acc Id: XP_040126366   ⟸   XM_040270432
- Peptide Label: isoform X13
RefSeq Acc Id: XP_040126363   ⟸   XM_040270429
- Peptide Label: isoform X10
RefSeq Acc Id: XP_040126369   ⟸   XM_040270435
- Peptide Label: isoform X15
- UniProtKB: A0A287D6K1 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_040126367   ⟸   XM_040270433
- Peptide Label: isoform X13
RefSeq Acc Id: XP_040126364   ⟸   XM_040270430
- Peptide Label: isoform X10
RefSeq Acc Id: XP_040126362   ⟸   XM_040270428
- Peptide Label: isoform X9
RefSeq Acc Id: XP_040126365   ⟸   XM_040270431
- Peptide Label: isoform X12
RefSeq Acc Id: XP_040126368   ⟸   XM_040270434
- Peptide Label: isoform X14
RefSeq Acc Id: XP_040126370   ⟸   XM_040270436
- Peptide Label: isoform X16
RefSeq Acc Id: XP_040126372   ⟸   XM_040270438
- Peptide Label: isoform X20
RefSeq Acc Id: ENSSTOP00000004849   ⟸   ENSSTOT00000005419
RefSeq Acc Id: ENSSTOP00000024613   ⟸   ENSSTOT00000040500
RefSeq Acc Id: ENSSTOP00000029179   ⟸   ENSSTOT00000036882
RefSeq Acc Id: ENSSTOP00000028499   ⟸   ENSSTOT00000032321
RefSeq Acc Id: ENSSTOP00000027224   ⟸   ENSSTOT00000042241
RefSeq Acc Id: ENSSTOP00000027130   ⟸   ENSSTOT00000039171
Protein Domains
Guanylate kinase-like   L27   PDZ   SH3


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSSTOG00000005385 Ensembl, UniProtKB/TrEMBL
Ensembl Transcript ENSSTOT00000005419.3 UniProtKB/TrEMBL
  ENSSTOT00000032321.1 UniProtKB/TrEMBL
  ENSSTOT00000036882.1 UniProtKB/TrEMBL
  ENSSTOT00000039171.1 UniProtKB/TrEMBL
  ENSSTOT00000040500.1 UniProtKB/TrEMBL
  ENSSTOT00000042241.1 UniProtKB/TrEMBL
Gene3D-CATH 2.30.42.10 UniProtKB/TrEMBL
  3.40.50.300 UniProtKB/TrEMBL
  Guanylate Kinase phosphate binding domain UniProtKB/TrEMBL
  Helix hairpin bin UniProtKB/TrEMBL
  SH3 Domains UniProtKB/TrEMBL
InterPro DLG1-like UniProtKB/TrEMBL
  DLG1_PEST_dom UniProtKB/TrEMBL
  GK/Ca_channel_bsu UniProtKB/TrEMBL
  Guanylate_kin-like_dom UniProtKB/TrEMBL
  Guanylate_kinase_CS UniProtKB/TrEMBL
  L27_1 UniProtKB/TrEMBL
  L27_dom UniProtKB/TrEMBL
  L27_dom_sf UniProtKB/TrEMBL
  P-loop_NTPase UniProtKB/TrEMBL
  PDZ UniProtKB/TrEMBL
  PDZ_assoc UniProtKB/TrEMBL
  PDZ_sf UniProtKB/TrEMBL
  SH3-like_dom_sf UniProtKB/TrEMBL
  SH3_domain UniProtKB/TrEMBL
NCBI Gene Dlg1 ENTREZGENE
PANTHER DISCS LARGE UniProtKB/TrEMBL
  DISKS LARGE HOMOLOG 1 UniProtKB/TrEMBL
Pfam Guanylate_kin UniProtKB/TrEMBL
  L27_1 UniProtKB/TrEMBL
  MAGUK_N_PEST UniProtKB/TrEMBL
  PDZ UniProtKB/TrEMBL
  PDZ_assoc UniProtKB/TrEMBL
  SH3_1 UniProtKB/TrEMBL
PIRSF MAGUK_DLGH UniProtKB/TrEMBL
PROSITE GUANYLATE_KINASE_1 UniProtKB/TrEMBL
  GUANYLATE_KINASE_2 UniProtKB/TrEMBL
  L27 UniProtKB/TrEMBL
  PDZ UniProtKB/TrEMBL
  SH3 UniProtKB/TrEMBL
SMART GuKc UniProtKB/TrEMBL
  L27 UniProtKB/TrEMBL
  MAGUK_N_PEST UniProtKB/TrEMBL
  PDZ UniProtKB/TrEMBL
  SH3 UniProtKB/TrEMBL
Superfamily-SCOP SSF101288 UniProtKB/TrEMBL
  SSF50044 UniProtKB/TrEMBL
  SSF50156 UniProtKB/TrEMBL
  SSF52540 UniProtKB/TrEMBL
UniProt A0A287CTL4 ENTREZGENE, UniProtKB/TrEMBL
  A0A287D122 ENTREZGENE, UniProtKB/TrEMBL
  A0A287D4P7 ENTREZGENE, UniProtKB/TrEMBL
  A0A287D6K1 ENTREZGENE, UniProtKB/TrEMBL
  I3M613 ENTREZGENE, UniProtKB/TrEMBL